The relation between rearing environment on the development of gut microbiota in juvenile tilapia

M.C.J. Verdegem, C. Giatsis, D. Sipkema, H. Smidt, G.H.J. Heilig, J.A.J. Verreth

Research output: Contribution to conferenceAbstractAcademic

Abstract

The effect of rearing environment on water bacterial communities (BC) and the association with those present in the gut of Nile tilapia larvae (Oreochromis niloticus, Linnaeus) grown in either recirculating or active suspension systems was explored. 454 pyrosequencing of PCR-amplified 16S rRNA gene fragments was applied to characterize the composition of water, feed and gut bacteria communities.
Observed changes in water BC over time and differences in water BCs between systems were highly correlated with corresponding water physico-chemical properties. Differences in gut bacteria communities during larval development were correlated with differences in water communities between systems. The correlation of feed BC with those in the gut was minor compared to that between gut and water, reflected by the fact that 4 to 43 times more OTUs were shared between water and gut than between gut and feed BC.
Shared OTUs between water and gut suggest a successful transfer of microorganisms from water into the gut, and give insight about the niche and ecological adaptability of water microorganisms inside the gut. These findings suggest that steering of gut microbial communities could be possible through water microbial management derived by the design and functionality of the rearing system.
Original languageEnglish
Publication statusPublished - 12 Oct 2017

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Tilapia (Cichlidae)
intestinal microorganisms
rearing
digestive system
water
bacterial communities
Otus
Oreochromis niloticus
suspension systems
microorganisms
bacteria
hydrochemistry
larval development
microbial communities
physicochemical properties
niches

Cite this

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title = "The relation between rearing environment on the development of gut microbiota in juvenile tilapia",
abstract = "The effect of rearing environment on water bacterial communities (BC) and the association with those present in the gut of Nile tilapia larvae (Oreochromis niloticus, Linnaeus) grown in either recirculating or active suspension systems was explored. 454 pyrosequencing of PCR-amplified 16S rRNA gene fragments was applied to characterize the composition of water, feed and gut bacteria communities. Observed changes in water BC over time and differences in water BCs between systems were highly correlated with corresponding water physico-chemical properties. Differences in gut bacteria communities during larval development were correlated with differences in water communities between systems. The correlation of feed BC with those in the gut was minor compared to that between gut and water, reflected by the fact that 4 to 43 times more OTUs were shared between water and gut than between gut and feed BC. Shared OTUs between water and gut suggest a successful transfer of microorganisms from water into the gut, and give insight about the niche and ecological adaptability of water microorganisms inside the gut. These findings suggest that steering of gut microbial communities could be possible through water microbial management derived by the design and functionality of the rearing system.",
author = "M.C.J. Verdegem and C. Giatsis and D. Sipkema and H. Smidt and G.H.J. Heilig and J.A.J. Verreth",
year = "2017",
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The relation between rearing environment on the development of gut microbiota in juvenile tilapia. / Verdegem, M.C.J.; Giatsis, C.; Sipkema, D.; Smidt, H.; Heilig, G.H.J.; Verreth, J.A.J.

2017.

Research output: Contribution to conferenceAbstractAcademic

TY - CONF

T1 - The relation between rearing environment on the development of gut microbiota in juvenile tilapia

AU - Verdegem, M.C.J.

AU - Giatsis, C.

AU - Sipkema, D.

AU - Smidt, H.

AU - Heilig, G.H.J.

AU - Verreth, J.A.J.

PY - 2017/10/12

Y1 - 2017/10/12

N2 - The effect of rearing environment on water bacterial communities (BC) and the association with those present in the gut of Nile tilapia larvae (Oreochromis niloticus, Linnaeus) grown in either recirculating or active suspension systems was explored. 454 pyrosequencing of PCR-amplified 16S rRNA gene fragments was applied to characterize the composition of water, feed and gut bacteria communities. Observed changes in water BC over time and differences in water BCs between systems were highly correlated with corresponding water physico-chemical properties. Differences in gut bacteria communities during larval development were correlated with differences in water communities between systems. The correlation of feed BC with those in the gut was minor compared to that between gut and water, reflected by the fact that 4 to 43 times more OTUs were shared between water and gut than between gut and feed BC. Shared OTUs between water and gut suggest a successful transfer of microorganisms from water into the gut, and give insight about the niche and ecological adaptability of water microorganisms inside the gut. These findings suggest that steering of gut microbial communities could be possible through water microbial management derived by the design and functionality of the rearing system.

AB - The effect of rearing environment on water bacterial communities (BC) and the association with those present in the gut of Nile tilapia larvae (Oreochromis niloticus, Linnaeus) grown in either recirculating or active suspension systems was explored. 454 pyrosequencing of PCR-amplified 16S rRNA gene fragments was applied to characterize the composition of water, feed and gut bacteria communities. Observed changes in water BC over time and differences in water BCs between systems were highly correlated with corresponding water physico-chemical properties. Differences in gut bacteria communities during larval development were correlated with differences in water communities between systems. The correlation of feed BC with those in the gut was minor compared to that between gut and water, reflected by the fact that 4 to 43 times more OTUs were shared between water and gut than between gut and feed BC. Shared OTUs between water and gut suggest a successful transfer of microorganisms from water into the gut, and give insight about the niche and ecological adaptability of water microorganisms inside the gut. These findings suggest that steering of gut microbial communities could be possible through water microbial management derived by the design and functionality of the rearing system.

M3 - Abstract

ER -