The FLUXNET2015 dataset and the ONEFlux processing pipeline for eddy covariance data

Gilberto Pastorello*, Carlo Trotta, Eleonora Canfora, Housen Chu, Danielle Christianson, You Wei Cheah, Cristina Poindexter, Jiquan Chen, Abdelrahman Elbashandy, Marty Humphrey, Peter Isaac, Diego Polidori, Alessio Ribeca, Catharine van Ingen, Leiming Zhang, Brian Amiro, Christof Ammann, M.A. Arain, Jonas Ardö, Timothy ArkebauerStefan K. Arndt, Nicola Arriga, Marc Aubinet, Mika Aurela, Dennis Baldocchi, Alan Barr, Eric Beamesderfer, Luca Belelli Marchesini, Onil Bergeron, Jason Beringer, Christian Bernhofer, Daniel Berveiller, Dave Billesbach, Thomas Andrew Black, Peter D. Blanken, Gil Bohrer, Julia Boike, Paul V. Bolstad, Damien Bonal, Jean Marc Bonnefond, David R. Bowling, Rosvel Bracho, Jason Brodeur, Christian Brümmer, Nina Buchmann, Benoit Burban, Sean P. Burns, Pauline Buysse, Peter Cale, Mauro Cavagna, Pierre Cellier, Shiping Chen, Isaac Chini, Torben R. Christensen, James Cleverly, Alessio Collalti, Claudia Consalvo, Bruce D. Cook, David Cook, Carole Coursolle, Edoardo Cremonese, Peter S. Curtis, Ettore D'Andrea, Humberto da Rocha, Xiaoqin Dai, Kenneth J. Davis, Bruno De Cinti, Agnes de Grandcourt, Anne De Ligne, Raimundo C. De Oliveira, Nicolas Delpierre, Ankur R. Desai, Carlos Marcelo Di Bella, Paul di Tommasi, Han Dolman, Francisco Domingo, Gang Dong, Sabina Dore, Pierpaolo Duce, Eric Dufrêne, Allison Dunn, Jiří Dušek, Derek Eamus, Uwe Eichelmann, Hatim Abdalla M. ElKhidir, Werner Eugster, Cacilia M. Ewenz, Brent Ewers, Daniela Famulari, Silvano Fares, Iris Feigenwinter, Andrew Feitz, Rasmus Fensholt, Gianluca Filippa, Marc Fischer, John Frank, Marta Galvagno, Mana Gharun, Damiano Gianelle, Bert Gielen, Beniamino Gioli, Anatoly Gitelson, Ignacio Goded, Mathias Goeckede, Allen H. Goldstein, Christopher M. Gough, Michael L. Goulden, Alexander Graf, Anne Griebel, Carsten Gruening, Thomas Grünwald, Albin Hammerle, Shijie Han, Xingguo Han, Birger Ulf Hansen, Chad Hanson, Juha Hatakka, Yongtao He, Markus Hehn, Bernard Heinesch, Nina Hinko-Najera, Lukas Hörtnagl, Lindsay Hutley, Andreas Ibrom, Hiroki Ikawa, Marcin Jackowicz-Korczynski, Dalibor Janouš, Wilma Jans, Rachhpal Jassal, Shicheng Jiang, Tomomichi Kato, Myroslava Khomik, Janina Klatt, Alexander Knohl, Sara Knox, Hideki Kobayashi, Georgia Koerber, Olaf Kolle, Yoshiko Kosugi, Ayumi Kotani, Andrew Kowalski, Bart Kruijt, Julia Kurbatova, Werner L. Kutsch, Hyojung Kwon, Samuli Launiainen, Tuomas Laurila, Bev Law, Ray Leuning, Yingnian Li, Michael Liddell, Jean Marc Limousin, Marryanna Lion, Adam J. Liska, Annalea Lohila, Ana López-Ballesteros, Efrén López-Blanco, Benjamin Loubet, Denis Loustau, Antje Lucas-Moffat, Johannes Lüers, Siyan Ma, Craig Macfarlane, Vincenzo Magliulo, Regine Maier, Ivan Mammarella, Giovanni Manca, Barbara Marcolla, Hank A. Margolis, Serena Marras, William Massman, Mikhail Mastepanov, Roser Matamala, Jaclyn Hatala Matthes, Francesco Mazzenga, Harry McCaughey, Ian McHugh, Andrew M.S. McMillan, Lutz Merbold, Wayne Meyer, Tilden Meyers, Scott D. Miller, Stefano Minerbi, Uta Moderow, Russell K. Monson, Leonardo Montagnani, Caitlin E. Moore, Eddy Moors, Virginie Moreaux, Christine Moureaux, J.W. Munger, Taro Nakai, Johan Neirynck, Zoran Nesic, Giacomo Nicolini, Asko Noormets, Matthew Northwood, Marcelo Nosetto, Yann Nouvellon, Kimberly Novick, Walter Oechel, Jørgen Eivind Olesen, Jean Marc Ourcival, Shirley A. Papuga, Frans Jan Parmentier, Eugenie Paul-Limoges, Marian Pavelka, Matthias Peichl, Elise Pendall, Richard P. Phillips, Kim Pilegaard, Norbert Pirk, Gabriela Posse, Thomas Powell, Heiko Prasse, Suzanne M. Prober, Serge Rambal, Üllar Rannik, Naama Raz-Yaseef, David Reed, Victor Resco de Dios, Natalia Restrepo-Coupe, Borja R. Reverter, Marilyn Roland, Simone Sabbatini, Torsten Sachs, Scott R. Saleska, Enrique P. Sánchez-Cañete, Zulia M. Sanchez-Mejia, Hans Peter Schmid, Marius Schmidt, Karl Schneider, Frederik Schrader, Ivan Schroder, Russell L. Scott, Pavel Sedlák, Penélope Serrano-Ortíz, Changliang Shao, Peili Shi, Ivan Shironya, Lukas Siebicke, Ladislav Šigut, Richard Silberstein, Costantino Sirca, Donatella Spano, Rainer Steinbrecher, Robert M. Stevens, Cove Sturtevant, Andy Suyker, Torbern Tagesson, Satoru Takanashi, Yanhong Tang, Nigel Tapper, Jonathan Thom, Frank Tiedemann, Michele Tomassucci, Juha Pekka Tuovinen, Shawn Urbanski, Riccardo Valentini, Michiel van der Molen, Eva van Gorsel, Ko van Huissteden, Andrej Varlagin, Joseph Verfaillie, Timo Vesala, Caroline Vincke, Domenico Vitale, Natalia Vygodskaya, Jeffrey P. Walker, Elizabeth Walter-Shea, Huimin Wang, Robin Weber, Sebastian Westermann, Christian Wille, Steven Wofsy, Georg Wohlfahrt, Sebastian Wolf, William Woodgate, Yuelin Li, Roberto Zampedri, Junhui Zhang, Guoyi Zhou, Donatella Zona, Deb Agarwal, Sebastien Biraud, Margaret Torn, Dario Papale*

*Corresponding author for this work

Research output: Contribution to journal › Article › Academic › peer-review

907 Citations (Scopus)

Abstract

The FLUXNET2015 dataset provides ecosystem-scale data on CO2, water, and energy exchange between the biosphere and the atmosphere, and other meteorological and biological measurements, from 212 sites around the globe (over 1500 site-years, up to and including year 2014). These sites, independently managed and operated, voluntarily contributed their data to create global datasets. Data were quality controlled and processed using uniform methods, to improve consistency and intercomparability across sites. The dataset is already being used in a number of applications, including ecophysiology studies, remote sensing studies, and development of ecosystem and Earth system models. FLUXNET2015 includes derived-data products, such as gap-filled time series, ecosystem respiration and photosynthetic uptake estimates, estimation of uncertainties, and metadata about the measurements, presented for the first time in this paper. In addition, 206 of these sites are for the first time distributed under a Creative Commons (CC-BY 4.0) license. This paper details this enhanced dataset and the processing methods, now made available as open-source codes, making the dataset more accessible, transparent, and reproducible.

Original languageEnglish
Article number225
Number of pages1
JournalScientific Data
Volume7
Issue number1
DOIs
Publication statusPublished - 9 Jul 2020

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  • 907 Citations
  • 1 Comment/Letter to the editor

  • The FLUXNET2015 dataset and the ONEFlux processing pipeline for eddy covariance data

    Pastorello, G., Trotta, C., Canfora, E., Chu, H., Christianson, D., Cheah, Y. W., Poindexter, C., Chen, J., Elbashandy, A., Humphrey, M., Isaac, P., Polidori, D., Reichstein, M., Ribeca, A., van Ingen, C., Vuichard, N., Zhang, L., Amiro, B., Ammann, C. & Arain, M. A. & 269 others, Ardö, J., Arkebauer, T., Arndt, S. K., Arriga, N., Aubinet, M., Aurela, M., Baldocchi, D., Barr, A., Beamesderfer, E., Marchesini, L. B., Bergeron, O., Beringer, J., Bernhofer, C., Berveiller, D., Billesbach, D., Black, T. A., Blanken, P. D., Bohrer, G., Boike, J., Bolstad, P. V., Bonal, D., Bonnefond, J. M., Bowling, D. R., Bracho, R., Brodeur, J., Brümmer, C., Buchmann, N., Burban, B., Burns, S. P., Buysse, P., Cale, P., Cavagna, M., Cellier, P., Chen, S., Chini, I., Christensen, T. R., Cleverly, J., Collalti, A., Consalvo, C., Cook, B. D., Cook, D., Coursolle, C., Cremonese, E., Curtis, P. S., D’Andrea, E., da Rocha, H., Dai, X., Davis, K. J., De Cinti, B., de Grandcourt, A., De Ligne, A., De Oliveira, R. C., Delpierre, N., Desai, A. R., Di Bella, C. M., di Tommasi, P., Dolman, H., Domingo, F., Dong, G., Dore, S., Duce, P., Dufrêne, E., Dunn, A., Dušek, J., Eamus, D., Eichelmann, U., ElKhidir, H. A. M., Eugster, W., Ewenz, C. M., Ewers, B., Famulari, D., Fares, S., Feigenwinter, I., Feitz, A., Fensholt, R., Filippa, G., Fischer, M., Frank, J., Galvagno, M., Gharun, M., Gianelle, D., Gielen, B., Gioli, B., Gitelson, A., Goded, I., Goeckede, M., Goldstein, A. H., Gough, C. M., Goulden, M. L., Graf, A., Griebel, A., Gruening, C., Grünwald, T., Hammerle, A., Han, S., Han, X., Hansen, B. U., Hanson, C., Hatakka, J., He, Y., Hehn, M., Heinesch, B., Hinko-Najera, N., Hörtnagl, L., Hutley, L., Ibrom, A., Ikawa, H., Jackowicz-Korczynski, M., Janouš, D., Jans, W., Jassal, R., Jiang, S., Kato, T., Khomik, M., Klatt, J., Knohl, A., Knox, S., Kobayashi, H., Koerber, G., Kolle, O., Kosugi, Y., Kotani, A., Kowalski, A., Kruijt, B., Kurbatova, J., Kutsch, W. L., Kwon, H., Launiainen, S., Laurila, T., Law, B., Leuning, R., Li, Y., Liddell, M., Limousin, J. M., Lion, M., Liska, A. J., Lohila, A., López-Ballesteros, A., López-Blanco, E., Loubet, B., Loustau, D., Lucas-Moffat, A., Lüers, J., Ma, S., Macfarlane, C., Magliulo, V., Maier, R., Mammarella, I., Manca, G., Marcolla, B., Margolis, H. A., Marras, S., Massman, W., Mastepanov, M., Matamala, R., Matthes, J. H., Mazzenga, F., McCaughey, H., McHugh, I., McMillan, A. M. S., Merbold, L., Meyer, W., Meyers, T., Miller, S. D., Minerbi, S., Moderow, U., Monson, R. K., Montagnani, L., Moore, C. E., Moors, E., Moreaux, V., Moureaux, C., Munger, J. W., Nakai, T., Neirynck, J., Nesic, Z., Nicolini, G., Noormets, A., Northwood, M., Nosetto, M., Nouvellon, Y., Novick, K., Oechel, W., Olesen, J. E., Ourcival, J. M., Papuga, S. A., Parmentier, F. J., Paul-Limoges, E., Pavelka, M., Peichl, M., Pendall, E., Phillips, R. P., Pilegaard, K., Pirk, N., Posse, G., Powell, T., Prasse, H., Prober, S. M., Rambal, S., Rannik, Ü., Raz-Yaseef, N., Rebmann, C., Reed, D., de Dios, V. R., Restrepo-Coupe, N., Reverter, B. R., Roland, M., Sabbatini, S., Sachs, T., Saleska, S. R., Sánchez-Cañete, E. P., Sanchez-Mejia, Z. M., Schmid, H. P., Schmidt, M., Schneider, K., Schrader, F., Schroder, I., Scott, R. L., Sedlák, P., Serrano-Ortíz, P., Shao, C., Shi, P., Shironya, I., Siebicke, L., Šigut, L., Silberstein, R., Sirca, C., Spano, D., Steinbrecher, R., Stevens, R. M., Sturtevant, C., Suyker, A., Tagesson, T., Takanashi, S., Tang, Y., Tapper, N., Thom, J., Tomassucci, M., Tuovinen, J. P., Urbanski, S., Valentini, R., van der Molen, M., van Gorsel, E., van Huissteden, K., Varlagin, A., Verfaillie, J., Vesala, T., Vincke, C., Vitale, D., Vygodskaya, N., Walker, J. P., Walter-Shea, E., Wang, H., Weber, R., Westermann, S., Wille, C., Wofsy, S., Wohlfahrt, G., Wolf, S., Woodgate, W., Li, Y., Zampedri, R., Zhang, J., Zhou, G., Zona, D., Agarwal, D., Biraud, S., Torn, M. & Papale, D., 25 Feb 2021, In: Scientific Data. 8, 1, 72.

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    Open Access
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