The Biosynthetic Gene cluster Meta’omics abundance Profiler (BiG-MAP)

H.E. Augustijn, Koen van den Berg, V. Pascal Andreu

Research output: Non-textual formSoftware

Abstract

This is the Github repository for the Biosynthetic Gene cluster Meta’omics abundance Profiler (BiG-MAP). Metabolic Gene Clusters (MGCs) are responsible of the synthesis of small molecules, that are known to have a major impact on the host. To evaluate their contribution to a given host phenotype, it is important to assess the MGC abundance and expression profile in a given dataset. Thus, we have built BiG-MAP, a bioinformatic tool to profile abundance and expression levels of gene clusters across metagenomic and metatranscriptomic data and evaluate their differential abundance and expression between different conditions.
Original languageEnglish
PublisherWageningen University & Research
Media of outputOnline
Publication statusPublished - 2020

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