Marker imputation and linkage map construction using a skim sequenced diploid potato population

C. Clot; X. Wang; A. Thérèse Navarro; J. Bucher; R.G.F. Visser; R. Finkers; H.J. van Eck

doi:10.5281/zenodo.6973533

Marker imputation and linkage map construction using a skim sequenced diploid potato population

C. Clot, X. Wang, A. Thérèse Navarro, J. Bucher, R.G.F. Visser, R. Finkers, H.J. van Eck

Research output: Contribution to conference › Poster › Academic

Abstract

The pipeline described in this poster facilitates the imputation of genotyping data from skim sequenced full-sib diploid populations. The resulting imputed markers can be used to construct high density linkage maps, explore transmission ratio distortion and identify loci regulating important traits.

Original language	English
DOIs	https://doi.org/10.5281/zenodo.6973533
Publication status	Published - 4 Jul 2022
Event	European Association of Potato Research triennial congress - Krakow, Poland Duration: 4 Jul 2022 → 8 Jul 2022

Conference/symposium

Conference/symposium	European Association of Potato Research triennial congress
Country/Territory	Poland
Period	4/07/22 → 8/07/22

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10.5281/zenodo.6973533Licence: CC BY

https://edepot.wur.nl/589668Licence: CC BY

Cite this

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title = "Marker imputation and linkage map construction using a skim sequenced diploid potato population",

abstract = "The pipeline described in this poster facilitates the imputation of genotyping data from skim sequenced full-sib diploid populations. The resulting imputed markers can be used to construct high density linkage maps, explore transmission ratio distortion and identify loci regulating important traits.",

author = "C. Clot and X. Wang and {Th{\'e}r{\`e}se Navarro}, A. and J. Bucher and R.G.F. Visser and R. Finkers and {van Eck}, H.J.",

year = "2022",

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T1 - Marker imputation and linkage map construction using a skim sequenced diploid potato population

AU - Clot, C.

AU - Wang, X.

AU - Thérèse Navarro, A.

AU - Bucher, J.

AU - Visser, R.G.F.

AU - Finkers, R.

AU - van Eck, H.J.

PY - 2022/7/4

Y1 - 2022/7/4

N2 - The pipeline described in this poster facilitates the imputation of genotyping data from skim sequenced full-sib diploid populations. The resulting imputed markers can be used to construct high density linkage maps, explore transmission ratio distortion and identify loci regulating important traits.

AB - The pipeline described in this poster facilitates the imputation of genotyping data from skim sequenced full-sib diploid populations. The resulting imputed markers can be used to construct high density linkage maps, explore transmission ratio distortion and identify loci regulating important traits.

U2 - 10.5281/zenodo.6973533

DO - 10.5281/zenodo.6973533

M3 - Poster

T2 - European Association of Potato Research triennial congress

Y2 - 4 July 2022 through 8 July 2022

ER -

Marker imputation and linkage map construction using a skim sequenced diploid potato population

Abstract

Conference/symposium

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Cite this