Abstract
We report here an update of the Botrytis cinerea strains B05.10 and T4 genomes, as well as an automated preliminary gene structure annotation. High-coverage de novo assemblies and reference-based alignments led to a correction of wrong base calls, elimination of sequence gaps, and improved joining of contigs. The new assemblies have substantially lower numbers of scaffolds and a concomitant increase in the N50.The list of protein-coding genes was generated using the evidence-driven gene predictor Augustus, with expressed sequence tag evidence and RNA-Seq data as input.
| Original language | English |
|---|---|
| Pages (from-to) | 1413-1414 |
| Journal | Eukaryotic Cell |
| Volume | 11 |
| Issue number | 11 |
| DOIs | |
| Publication status | Published - 2012 |
Keywords
- rna-seq
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Botryotinia fuckeliana strain T4 genome sequencing, draft assembly version 2
Staats, M. (Creator) & van Kan, J. A. L. (Creator), Wageningen University & Research, 21 Aug 2012
https://www.ncbi.nlm.nih.gov/bioproject/162725
Dataset