Genome and plasmid sequences of Escherichia coli KV7, an extended- spectrum β-Lactamase isolate derived from feces of a healthy pig

Michael D. Bateman; Stefan P.W. de Vries; Srishti Gupta; Luca Guardabassi; Lina M. Cavaco; Andrew J. Grant; Mark A. Holmes

doi:10.1128/genomeA.00595-17

Genome and plasmid sequences of Escherichia coli KV7, an extended- spectrum β-Lactamase isolate derived from feces of a healthy pig

Michael D. Bateman, Stefan P.W. de Vries, Srishti Gupta, Luca Guardabassi, Lina M. Cavaco, Andrew J. Grant, Mark A. Holmes^*

^*Corresponding author for this work

Host-Microbe Interactomics

Research output: Contribution to journal › Letter › Academic › peer-review

Abstract

We present single-contig assemblies for Escherichia coli strain KV7 (serotype O27, phylogenetic group D) and its six plasmids, isolated from a healthy pig, as determined by PacBio RS II and Illumina MiSeq sequencing. The chromosome of 4,997,475 bp and G+C content of 50.75% harbored 4,540 protein-encoding genes.

Original language	English
Article number	e00595-17
Number of pages	2
Journal	Genome Announcements
Volume	5
Issue number	38
DOIs	https://doi.org/10.1128/genomeA.00595-17
Publication status	Published - 2017

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10.1128/genomeA.00595-17Licence: CC BY

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Genome assembly of E. coli KV7, a BLA-CTX-containing strain isolated from a pig
Bateman, M. D. (Creator), de Vries, S. P. W. (Creator), Gupta, S. (Creator), Guardabassi, L. (Creator), Cavaco, L. M. (Creator), Grant, A. J. (Creator) & Holmes, M. A. (Creator), University of Cambridge, 10 Mar 2017
https://www.ebi.ac.uk/ena/data/view/PRJEB19461
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@article{44640070bd094024a1f6fdecff30ca22,

title = "Genome and plasmid sequences of Escherichia coli KV7, an extended- spectrum β-Lactamase isolate derived from feces of a healthy pig",

abstract = "We present single-contig assemblies for Escherichia coli strain KV7 (serotype O27, phylogenetic group D) and its six plasmids, isolated from a healthy pig, as determined by PacBio RS II and Illumina MiSeq sequencing. The chromosome of 4,997,475 bp and G+C content of 50.75% harbored 4,540 protein-encoding genes.",

author = "Bateman, {Michael D.} and {de Vries}, {Stefan P.W.} and Srishti Gupta and Luca Guardabassi and Cavaco, {Lina M.} and Grant, {Andrew J.} and Holmes, {Mark A.}",

year = "2017",

doi = "10.1128/genomeA.00595-17",

language = "English",

volume = "5",

journal = "Genome Announcements",

issn = "2169-8287",

publisher = "American Society for Microbiology",

number = "38",

}

Genome and plasmid sequences of Escherichia coli KV7, an extended- spectrum β-Lactamase isolate derived from feces of a healthy pig. / Bateman, Michael D.; de Vries, Stefan P.W.; Gupta, Srishti; Guardabassi, Luca; Cavaco, Lina M.; Grant, Andrew J.; Holmes, Mark A.

In: Genome Announcements, Vol. 5, No. 38, e00595-17, 2017.

Research output: Contribution to journal › Letter › Academic › peer-review

TY - JOUR

T1 - Genome and plasmid sequences of Escherichia coli KV7, an extended- spectrum β-Lactamase isolate derived from feces of a healthy pig

AU - Bateman, Michael D.

AU - de Vries, Stefan P.W.

AU - Gupta, Srishti

AU - Guardabassi, Luca

AU - Cavaco, Lina M.

AU - Grant, Andrew J.

AU - Holmes, Mark A.

PY - 2017

Y1 - 2017

N2 - We present single-contig assemblies for Escherichia coli strain KV7 (serotype O27, phylogenetic group D) and its six plasmids, isolated from a healthy pig, as determined by PacBio RS II and Illumina MiSeq sequencing. The chromosome of 4,997,475 bp and G+C content of 50.75% harbored 4,540 protein-encoding genes.

AB - We present single-contig assemblies for Escherichia coli strain KV7 (serotype O27, phylogenetic group D) and its six plasmids, isolated from a healthy pig, as determined by PacBio RS II and Illumina MiSeq sequencing. The chromosome of 4,997,475 bp and G+C content of 50.75% harbored 4,540 protein-encoding genes.

U2 - 10.1128/genomeA.00595-17

DO - 10.1128/genomeA.00595-17

M3 - Letter

AN - SCOPUS:85029808267

VL - 5

JO - Genome Announcements

JF - Genome Announcements

SN - 2169-8287

IS - 38

M1 - e00595-17

ER -

Genome and plasmid sequences of Escherichia coli KV7, an extended- spectrum β-Lactamase isolate derived from feces of a healthy pig

Abstract

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Genome assembly of E. coli KV7, a BLA-CTX-containing strain isolated from a pig

Cite this