Draft genome sequence of the oleaginous green alga Tetradesmus obliquus UTEX 393

B.M. Carreres; L. de Jaeger; J. Springer; M.J. Barbosa; G. Breuer; E.J. van den End; D.M.M. Kleinegris; I. Schäffers; E.J.H. Wolbert; H. Zhang; P.P. Lamers; R.B. Draaisma; V.A.P. Martins dos Santos; R.H. Wijffels; G. Eggink; P.J. Schaap; D.E. Martens

doi:10.1128/genomeA.01449-16

Draft genome sequence of the oleaginous green alga Tetradesmus obliquus UTEX 393

B.M. Carreres, L. de Jaeger, J. Springer, M.J. Barbosa, G. Breuer, E.J. van den End, D.M.M. Kleinegris, I. Schäffers, E.J.H. Wolbert, H. Zhang, P.P. Lamers, R.B. Draaisma, V.A.P. Martins dos Santos, R.H. Wijffels, G. Eggink, P.J. Schaap, D.E. Martens^*

^*Corresponding author for this work

Research output: Contribution to journal › Article › Academic › peer-review

32 Citations (Scopus)

Abstract

The microalgae Tetradesmus obliquus is able to maintain a high photosynthetic efficiency under nitrogen limitation and is considered a promising green microalgae for sustainable production of diverse compounds, including biofuels. Here, we report the first draft whole-genome shotgun sequencing of T. obliquus. The final assembly comprises 108,715,903 bp with over 1,368 scaffolds.

Original language	English
Article number	e01449-16
Journal	Genome Announcements
Volume	5
Issue number	3
DOIs	https://doi.org/10.1128/genomeA.01449-16
Publication status	Published - 2017

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10.1128/genomeA.01449-16Licence: CC BY

Scenedesmus Obliquus UTEX393 draft genome
Carreres, B. M. (Creator), de Jaeger, L. (Creator), Springer, J. (Creator), Barbosa, M. J. (Creator), Breuer, G. (Creator), van den End, E. J. (Creator), Kleinegris, D. M. M. (Creator), Schäffers, I. (Creator), Wolbert, E. J. H. (Creator), Zhang, H. (Creator), Lamers, P. P. (Creator), Martins dos Santos, V. A. P. (Creator), Wijffels, R. H. (Creator), Eggink, G. (Creator), Schaap, P. J. (Creator) & Martens, D. E. (Creator), Wageningen University, 1 Nov 2016
https://www.ebi.ac.uk/ena/data/view/PRJEB15865
Dataset
The diurnal transcriptional landscape of the microalga Tetradesmus obliquus
Carreres, B. M. (Creator) & Martens, D. E. (Creator), Wageningen University & Research, 24 Sept 2018
https://www.ebi.ac.uk/arrayexpress/experiments/E-MTAB-7009/
Dataset
Transcriptional and physiological diurnal responses of Tetradesmus obliquus under light-dark cycles and nitrogen limitation
Carreres, B. M. (Creator) & Martens, D. E. (Creator), Wageningen University & Research, 30 May 2019
https://www.ebi.ac.uk/arrayexpress/experiments/E-MTAB-7016/
Dataset

Cite this

Carreres, B. M., de Jaeger, L., Springer, J., Barbosa, M. J., Breuer, G., van den End, E. J., Kleinegris, D. M. M., Schäffers, I., Wolbert, E. J. H., Zhang, H., Lamers, P. P., Draaisma, R. B., Martins dos Santos, V. A. P., Wijffels, R. H., Eggink, G., Schaap, P. J., & Martens, D. E. (2017). Draft genome sequence of the oleaginous green alga Tetradesmus obliquus UTEX 393. Genome Announcements, 5(3), Article e01449-16. https://doi.org/10.1128/genomeA.01449-16

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abstract = "The microalgae Tetradesmus obliquus is able to maintain a high photosynthetic efficiency under nitrogen limitation and is considered a promising green microalgae for sustainable production of diverse compounds, including biofuels. Here, we report the first draft whole-genome shotgun sequencing of T. obliquus. The final assembly comprises 108,715,903 bp with over 1,368 scaffolds.",

author = "B.M. Carreres and {de Jaeger}, L. and J. Springer and M.J. Barbosa and G. Breuer and {van den End}, E.J. and D.M.M. Kleinegris and I. Sch{\"a}ffers and E.J.H. Wolbert and H. Zhang and P.P. Lamers and R.B. Draaisma and {Martins dos Santos}, V.A.P. and R.H. Wijffels and G. Eggink and P.J. Schaap and D.E. Martens",

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language = "English",

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Carreres, BM, de Jaeger, L, Springer, J, Barbosa, MJ, Breuer, G, van den End, EJ, Kleinegris, DMM, Schäffers, I, Wolbert, EJH, Zhang, H, Lamers, PP, Draaisma, RB, Martins dos Santos, VAP , Wijffels, RH, Eggink, G, Schaap, PJ & Martens, DE 2017, 'Draft genome sequence of the oleaginous green alga Tetradesmus obliquus UTEX 393', Genome Announcements, vol. 5, no. 3, e01449-16. https://doi.org/10.1128/genomeA.01449-16

TY - JOUR

T1 - Draft genome sequence of the oleaginous green alga Tetradesmus obliquus UTEX 393

AU - Carreres, B.M.

AU - de Jaeger, L.

AU - Springer, J.

AU - Barbosa, M.J.

AU - Breuer, G.

AU - van den End, E.J.

AU - Kleinegris, D.M.M.

AU - Schäffers, I.

AU - Wolbert, E.J.H.

AU - Zhang, H.

AU - Lamers, P.P.

AU - Draaisma, R.B.

AU - Martins dos Santos, V.A.P.

AU - Wijffels, R.H.

AU - Eggink, G.

AU - Schaap, P.J.

AU - Martens, D.E.

PY - 2017

Y1 - 2017

N2 - The microalgae Tetradesmus obliquus is able to maintain a high photosynthetic efficiency under nitrogen limitation and is considered a promising green microalgae for sustainable production of diverse compounds, including biofuels. Here, we report the first draft whole-genome shotgun sequencing of T. obliquus. The final assembly comprises 108,715,903 bp with over 1,368 scaffolds.

AB - The microalgae Tetradesmus obliquus is able to maintain a high photosynthetic efficiency under nitrogen limitation and is considered a promising green microalgae for sustainable production of diverse compounds, including biofuels. Here, we report the first draft whole-genome shotgun sequencing of T. obliquus. The final assembly comprises 108,715,903 bp with over 1,368 scaffolds.

U2 - 10.1128/genomeA.01449-16

DO - 10.1128/genomeA.01449-16

M3 - Article

AN - SCOPUS:85011903640

SN - 2169-8287

VL - 5

JO - Genome Announcements

JF - Genome Announcements

IS - 3

M1 - e01449-16

ER -

Draft genome sequence of the oleaginous green alga Tetradesmus obliquus UTEX 393

Abstract

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Datasets

Scenedesmus Obliquus UTEX393 draft genome

The diurnal transcriptional landscape of the microalga Tetradesmus obliquus

Transcriptional and physiological diurnal responses of Tetradesmus obliquus under light-dark cycles and nitrogen limitation

Cite this