Complete genome sequence of Dehalobacter restrictus PER-K23T

T.K. Kruse, J. Maillard, L.A. Goodwin, T. Woyke, H. Teshima, D.C. Bruce, J.C. Detter, R. Tapia, C. Han, M. Huntemann, C.L. Wei, J. Han, A. Chen, N. Kyrpides, E. Szeto, V. Markowitz, N. Ivanova, I. Pagani, A. Pati, S. PitluckM. Nolan, C. Holliger, H. Smidt

Research output: Contribution to journalArticleAcademicpeer-review

28 Citations (Scopus)

Abstract

Dehalobacter restrictus strain PER-K23 (DSM 9455) is the type strain of the species Dehalobacter restrictus. D. restrictus strain PER-K23 grows by organohalide respiration, coupling the oxidation of H2 to the reductive dechlorination of tetra- or trichloroethene. Growth has not been observed with any other electron donor or acceptor, nor has fermentative growth been shown. Here we introduce the first full genome of a pure culture within the genus Dehalobacter. The 2,943,336 bp long genome contains 2,826 protein coding and 82 RNA genes, including 5 16S rRNA genes. Interestingly, the genome contains 25 predicted reductive dehalogenase genes, the majority of which appear to be full length. The reductive dehalogenase genes are mainly located in two clusters, suggesting a much larger potential for organohalide respiration than previously anticipated
Original languageEnglish
Pages (from-to)375-388
JournalStandards in Genomic Sciences
Volume8
Issue number3
DOIs
Publication statusPublished - 2013

Keywords

  • tetrachloroethene reductive dehalogenase
  • hafniense strain tce1
  • desulfitobacterium-hafniense
  • dehalococcoides-ethenogenes
  • rna genes
  • bacteria
  • respiration
  • geobacter
  • protein
  • halorespiration

Fingerprint Dive into the research topics of 'Complete genome sequence of Dehalobacter restrictus PER-K23T'. Together they form a unique fingerprint.

Cite this