Complete closed genome sequence of the inulin-utilizing lactiplantibacillus plantarum strain Lp900, obtained using a hybrid nanopore and illumina assembly

Jori Fuhren; Reindert Nijland; Michiel Wels; Jos Boekhorst; Michiel Kleerebezem

doi:10.1128/MRA.00185-21

Complete closed genome sequence of the inulin-utilizing lactiplantibacillus plantarum strain Lp900, obtained using a hybrid nanopore and illumina assembly

Jori Fuhren, Reindert Nijland, Michiel Wels, Jos Boekhorst, Michiel Kleerebezem^*

^*Corresponding author for this work

Research output: Contribution to journal › Article › Academic › peer-review

Abstract

Lactiplantibacillus plantarum is a genetically and phenotypically diverse lactic acid bacterium species. We announce the hybrid de novo assembly of Oxford Nanopore Technologies and Illumina DNA sequence reads, producing a closed circular chromosome of 3,206,992bp and six plasmids of the inulin-utilizing L. plantarum strain Lp900.

Original language	English
Article number	e00185-21
Journal	Microbiology Resource Announcements
Volume	10
Issue number	17
DOIs	https://doi.org/10.1128/MRA.00185-21
Publication status	Published - 29 Apr 2021

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10.1128/MRA.00185-21Licence: CC BY

https://edepot.wur.nl/548465Licence: CC BY

Lactiplantibacillus plantarum strain:Lp900 Genome sequencing and assembly
Führen, J. (Creator), Nijland, R. (Creator), Wels, M. (Creator), Boekhorst, J. (Creator) & Kleerebezem, M. (Creator), Wageningen University & Research, 16 Feb 2021
https://www.ncbi.nlm.nih.gov/bioproject/630372
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title = "Complete closed genome sequence of the inulin-utilizing lactiplantibacillus plantarum strain Lp900, obtained using a hybrid nanopore and illumina assembly",

abstract = "Lactiplantibacillus plantarum is a genetically and phenotypically diverse lactic acid bacterium species. We announce the hybrid de novo assembly of Oxford Nanopore Technologies and Illumina DNA sequence reads, producing a closed circular chromosome of 3,206,992bp and six plasmids of the inulin-utilizing L. plantarum strain Lp900.",

author = "Jori Fuhren and Reindert Nijland and Michiel Wels and Jos Boekhorst and Michiel Kleerebezem",

year = "2021",

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doi = "10.1128/MRA.00185-21",

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Complete closed genome sequence of the inulin-utilizing lactiplantibacillus plantarum strain Lp900, obtained using a hybrid nanopore and illumina assembly. / Fuhren, Jori ; Nijland, Reindert; Wels, Michiel et al.

In: Microbiology Resource Announcements, Vol. 10, No. 17, e00185-21, 29.04.2021.

Research output: Contribution to journal › Article › Academic › peer-review

TY - JOUR

T1 - Complete closed genome sequence of the inulin-utilizing lactiplantibacillus plantarum strain Lp900, obtained using a hybrid nanopore and illumina assembly

AU - Fuhren, Jori

AU - Nijland, Reindert

AU - Wels, Michiel

AU - Boekhorst, Jos

AU - Kleerebezem, Michiel

PY - 2021/4/29

Y1 - 2021/4/29

N2 - Lactiplantibacillus plantarum is a genetically and phenotypically diverse lactic acid bacterium species. We announce the hybrid de novo assembly of Oxford Nanopore Technologies and Illumina DNA sequence reads, producing a closed circular chromosome of 3,206,992bp and six plasmids of the inulin-utilizing L. plantarum strain Lp900.

AB - Lactiplantibacillus plantarum is a genetically and phenotypically diverse lactic acid bacterium species. We announce the hybrid de novo assembly of Oxford Nanopore Technologies and Illumina DNA sequence reads, producing a closed circular chromosome of 3,206,992bp and six plasmids of the inulin-utilizing L. plantarum strain Lp900.

U2 - 10.1128/MRA.00185-21

DO - 10.1128/MRA.00185-21

M3 - Article

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VL - 10

JO - Microbiology Resource Announcements

JF - Microbiology Resource Announcements

SN - 2576-098X

IS - 17

M1 - e00185-21

ER -

Complete closed genome sequence of the inulin-utilizing lactiplantibacillus plantarum strain Lp900, obtained using a hybrid nanopore and illumina assembly

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Lactiplantibacillus plantarum strain:Lp900 Genome sequencing and assembly

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