ChronoShop 1.1 for the analysis of circadian properties of behaviour

K. Spoelstra

ChronoShop 1.1 for the analysis of circadian properties of behaviour

K. Spoelstra

Plant Ecology and Nature Conservation

Research output: Non-textual form › Software

Abstract

Chronoshop is designed for circadian analysis in behavioral data. The program is capable of: - Quickly browse through you activity data files and view activity patterns - Plotting actograms in a qualitative and quantitative way - Directly batch process all data files present in one folder - Plotting data modulo variable cycle durations - Running periodograms based on Sokholove and Bushell and Lomb-Scargle algorithms - Detect phase markers such as Centerpoints of Gravity and on- and offset of activity - Project phase markers on activity data - Plotting behavioral data on top of meta data such as light/dark information - Export data series for making custom graphs with (external) plotting software - Calculate phase shift in activity (2016-01-01)

Original language	English
Place of Publication	Wageningen
Media of output	Online
Publication status	Published - 24 Jul 2018

Keywords

circadian analysis

Access to Document

https://hdl.handle.net/10411/YHJEFV

1 Article

Artificial light at night shifts daily activity patterns but not the internal clock in the great tit (Parus major)
Spoelstra, K., Verhagen, I., Meijer, D. & Visser, M. E., 28 Mar 2018, In: Proceedings of the Royal Society B: Biological Sciences. 285, 1875, 20172751.
Research output: Contribution to journal › Article › Academic › peer-review
25 Citations (Scopus)

Replication Data for: Artificial light at night shifts daily activity patterns but not the internal clock in Parus major
Spoelstra, K. (Creator), 15 May 2017
DOI: 10.34894/VGKYWY
Dataset

Cite this

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title = "ChronoShop 1.1 for the analysis of circadian properties of behaviour",

abstract = "Chronoshop is designed for circadian analysis in behavioral data. The program is capable of: - Quickly browse through you activity data files and view activity patterns - Plotting actograms in a qualitative and quantitative way - Directly batch process all data files present in one folder - Plotting data modulo variable cycle durations - Running periodograms based on Sokholove and Bushell and Lomb-Scargle algorithms - Detect phase markers such as Centerpoints of Gravity and on- and offset of activity - Project phase markers on activity data - Plotting behavioral data on top of meta data such as light/dark information - Export data series for making custom graphs with (external) plotting software - Calculate phase shift in activity (2016-01-01) ",

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AB - Chronoshop is designed for circadian analysis in behavioral data. The program is capable of: - Quickly browse through you activity data files and view activity patterns - Plotting actograms in a qualitative and quantitative way - Directly batch process all data files present in one folder - Plotting data modulo variable cycle durations - Running periodograms based on Sokholove and Bushell and Lomb-Scargle algorithms - Detect phase markers such as Centerpoints of Gravity and on- and offset of activity - Project phase markers on activity data - Plotting behavioral data on top of meta data such as light/dark information - Export data series for making custom graphs with (external) plotting software - Calculate phase shift in activity (2016-01-01)

KW - circadian analysis

M3 - Software

CY - Wageningen

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ChronoShop 1.1 for the analysis of circadian properties of behaviour

Abstract

Keywords

Access to Document

Fingerprint

Research output

Artificial light at night shifts daily activity patterns but not the internal clock in the great tit (Parus major)

Datasets

Replication Data for: Artificial light at night shifts daily activity patterns but not the internal clock in Parus major

Cite this