5-Fluorotryptophan as dual probe for ground-state heterogeneity and excited-state dynamics in apoflavodoxin

N.V. Visser, A.H. Westphal, S.M. Nabuurs, A. van Hoek, C.P.M. van Mierlo, A.J.W.G. Visser, J. Broos, H. van Amerongen

Research output: Contribution to journalArticleAcademicpeer-review

12 Citations (Scopus)

Abstract

The apoflavodoxin protein from Azotobacter vinelandii harboring three tryptophan (Trp) residues, was biosynthetically labeled with 5-fluorotryptophan (5-FTrp). 5-FTrp has the advantage that chemical differences in its microenvironment can be sensitively visualized via 19F NMR. Moreover, it shows simpler fluorescence decay kinetics. The occurrence of FRET was earlier observed via the fluorescence anisotropy decay of WT apoflavodoxin and the anisotropy decay parameters are in excellent agreement with distances between and relative orientations of all Trp residues. The anisotropy decay in 5-FTrp apoflavodoxin demonstrates that the distances and orientations are identical for this protein. This work demonstrates the added value of replacing Trp by 5-FTrp to study structural features of proteins via 19F NMR and fluorescence spectroscopy
Original languageEnglish
Pages (from-to)2785-2788
JournalFEBS Letters
Volume583
Issue number17
DOIs
Publication statusPublished - 2009

Keywords

  • azotobacter-vinelandii
  • fluorescence decay
  • tryptophan
  • proteins
  • kinetics
  • pathway

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