Development and application of high throughput computational methods for the identification of biologically significant genome-wide variation in host-microbe interactions

Project: PhD

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  • 2014

    BioHackathon series in 2011 and 2012: penetration of ontology and linked data in life science domains

    Katayama, T., Wilkinson, M. D., Aoki-Kinoshita, K. F. & Prins, J. C. P., 2014, In: Journal of Biomedical Semantics. 5, 5.

    Research output: Contribution to journalArticleAcademicpeer-review

    Open Access
    30 Citations (Scopus)
  • 2013

    The 3rd DBCLS BioHackathon: improving life science data integration with Semantic Web technologies

    Katayama, T., Wilkinson, D. W., Micklem, G., Kawashima, S., Yamaguchi, A., Nakao, M., Yamamoto, T., Okamoto, S., Oouchida, K., Chung, H., Aerts, J., Afzal, H., Antezana, E., Arakawa, K., Aranda, B., Belleau, F., Bolleman, J., Bonnal, R. J. P., Chapman, B., Cock, P. J. A. & 46 others, Eriksson, T., Gordon, P. M. K., Goto, N., Hayashida, K., Horn, H., Ishiwata, R., Kaminuma, E., Kasprzyk, A., Kawaji, H., Kido, N., Kim, Y., Kinjo, A. R., Konishi, F., Kwon, K. H., Labarga, A., Lamprecht, A., Lin, Y., Lindenbaum, P., McCarthy, L., Morita, H., Murakami, K., Nagao, K., Nishida, K., Nishimura, K., Nishizawa, T., Ogishima, S., Ono, K., Oshita, K., Park, K., Prins, J. C. P., Saito, T., Samwald, M., Satagopam, V. P., Shigemoto, Y., Smith, R., Splendiani, A., Sugawara, H., Taylor, J., Vos, R. A., Withers, D., Yamasaki, C., Zmasek, C. M., Kawamoto, S., Okubo, K., Asai, K. & Takagi, T., 2013, In: Journal of Biomedical Semantics. 4, 6.

    Research output: Contribution to journalArticleAcademicpeer-review

    Open Access
    18 Citations (Scopus)
  • 2012

    Biogem: an effective tool based approach for scaling up open source software development in bioinformatics

    Bonnal, R. J. P., Smant, G. & Prins, J. C. P., 2012, In: Bioinformatics. 28, 7, p. 1035-1037

    Research output: Contribution to journalArticleAcademicpeer-review

    23 Citations (Scopus)
  • xQTL workbench: a scalable web environment for multi-level QTL analysis

    Arends, D., van der Velde, K. J., Prins, J. C. P., Broman, K. W., Möller, S., Jansen, R. C. & Swertz, M. A., 2012, In: Bioinformatics. 28, 7, p. 1042-1044

    Research output: Contribution to journalArticleAcademicpeer-review

    10 Citations (Scopus)