Development and application of high throughput computational methods for the identification of biologically significant genome-wide variation in host-microbe interactions

Project: PhD

Project Details

StatusFinished
Effective start/end date1/10/075/10/15

Research Output

High-throughput open source computational methods for genetics and genomics

Prins, J. C. P., 2015, Wageningen: Wageningen University. 136 p.

Research output: Thesisinternal PhD, WU

Open Access
  • BioHackathon series in 2011 and 2012: penetration of ontology and linked data in life science domains

    Katayama, T., Wilkinson, M. D., Aoki-Kinoshita, K. F. & Prins, J. C. P., 2014, In : Journal of Biomedical Semantics. 5, 5.

    Research output: Contribution to journalArticleAcademicpeer-review

    Open Access
  • 24 Citations (Scopus)

    The 3rd DBCLS BioHackathon: improving life science data integration with Semantic Web technologies

    Katayama, T., Wilkinson, D. W., Micklem, G., Kawashima, S., Yamaguchi, A., Nakao, M., Yamamoto, T., Okamoto, S., Oouchida, K., Chung, H., Aerts, J., Afzal, H., Antezana, E., Arakawa, K., Aranda, B., Belleau, F., Bolleman, J., Bonnal, R. J. P., Chapman, B., Cock, P. J. A. & 46 others, Eriksson, T., Gordon, P. M. K., Goto, N., Hayashida, K., Horn, H., Ishiwata, R., Kaminuma, E., Kasprzyk, A., Kawaji, H., Kido, N., Kim, Y., Kinjo, A. R., Konishi, F., Kwon, K. H., Labarga, A., Lamprecht, A., Lin, Y., Lindenbaum, P., McCarthy, L., Morita, H., Murakami, K., Nagao, K., Nishida, K., Nishimura, K., Nishizawa, T., Ogishima, S., Ono, K., Oshita, K., Park, K., Prins, J. C. P., Saito, T., Samwald, M., Satagopam, V. P., Shigemoto, Y., Smith, R., Splendiani, A., Sugawara, H., Taylor, J., Vos, R. A., Withers, D., Yamasaki, C., Zmasek, C. M., Kawamoto, S., Okubo, K., Asai, K. & Takagi, T., 2013, In : Journal of Biomedical Semantics. 4, 6.

    Research output: Contribution to journalArticleAcademicpeer-review

    Open Access
  • 16 Citations (Scopus)

    Activities

    • 6 Public lecture/debate/seminar

    Programming Open Source Software in Bioinformatics

    Pjotr Prins (Speaker)

    29 Feb 2012 → …

    Activity: Talk or presentationPublic lecture/debate/seminarOther

    Design principles and programming in Ruby for Bioinformatics using bio-table as an example

    Pjotr Prins (Speaker)

    16 Sep 2012 → …

    Activity: Talk or presentationPublic lecture/debate/seminarOther

    Software resources for Bioinformatics

    Pjotr Prins (Speaker)

    19 Jul 2012 → …

    Activity: Talk or presentationPublic lecture/debate/seminarOther