Breed4Food (WUR)

Animal Breeding & Genomics

Project: Other

Status	Active
Effective start/end date	1/01/13 → …

106 Article
55 Conference paper
42 Abstract
9 Poster
More

Classifying aneuploidy in genotype intensity data using deep learning
Bouwman, A. C., Hulsegge, I., Hawken, R. J., Henshall, J. M., Veerkamp, R. F., Schokker, D. & Kamphuis, C., 21 Feb 2023, In: Journal of Animal Breeding and Genetics. 140, 3, p. 304-315 12 p.
Research output: Contribution to journal › Article › Academic › peer-review

Open Access
Identification and characterisation of de novo germline structural variants in two commercial pig lines using trio-based whole genome sequencing
Steensma, M. J., Lee, Y. L., Bouwman, A. C., Pita Barros, C., Derks, M. F. L., Bink, M. C. A. M., Harlizius, B., Huisman, A. E., Crooijmans, R. P. M. A., Groenen, M. A. M., Mulder, H. A. & Rochus, C. M., 18 Apr 2023, In: BMC Genomics. 24, 1, 11 p., 208.
Research output: Contribution to journal › Article › Academic › peer-review

Open Access
Validation with single-step SNPBLUP shows that evaluations can continue using a single mean of genotyped individuals, even with multiple breeds
Aldridge, M., Vandenplas, J., Duenk, P., Henshall, J., Hawken, R. & Calus, M., 22 Mar 2023, In: Genetics Selection Evolution. 55, 12 p., 19.
Research output: Contribution to journal › Article › Academic › peer-review

Open Access

Locomotion Data Breed4Food: Educational Files
Schokker, D. (Creator), Athanasiadis, I. (Creator), Visser, B. (Creator), Veerkamp, R. (Creator) & Kamphuis, C. (Creator), Wageningen University & Research, 1 Jan 2020
DOI: 10.5281/zenodo.3563513
Dataset
Population bottlenecks and deleterious variation in small populations
Bortoluzzi, C. (Creator), Bosse, M. (Creator), Derks, M. (Creator), Crooijmans, R. (Creator), Groenen, M. A. M. (Creator) & Megens, H. (Creator), Wageningen University, 15 Sep 2019
https://www.ebi.ac.uk/ena/data/view/PRJEB34245
Dataset

33 Public lecture/debate/seminar
20 Oral presentation

WP3 - Phenotyping interface
Claudia Kamphuis (Speaker), Michael Aldridge (Contributor) & István Fodor (Contributor)
10 Nov 2022
Activity: Talk or presentation › Public lecture/debate/seminar › Professional
Classifying aneuploidy in genotype intensity data using Deep Learning
Ina Hulsegge (Speaker), Claudia Kamphuis (Speaker), Dirkjan Schokker (Speaker) & Aniek Bouwman (Speaker)
21 Dec 2021
Activity: Talk or presentation › Oral presentation › Professional
Efficient algorithms for genomic analyses - SNP pruning in large genotype and sequence datasets
Mario Calus (Speaker) & Jeremie Vandenplas (Contributor)
7 Jan 2020
Activity: Talk or presentation › Oral presentation › Other

Fokkerij biedt perspectief bij verbeteren veerkracht
H.W.M. Poppe, H.A. Mulder & T.V.L. Berghof
15/03/19
1 Media contribution
Press/Media: Research › Other
Gene editing: Sturen op eigenschappen van dier is volgens genetica professor Roel Veerkamp nog enorme puzzel
R.F. Veerkamp & H.A. Mulder
24/03/18
1 Media contribution
Press/Media: Expert Comment › Other
Kaf van het koren scheiden
Mario Calus
1/01/14
1 item of Media coverage
Press/Media: Expert Comment › Other