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Sven Warris

drs.

 https://orcid.org/0000-0002-9408-9151
    20152020
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    Fingerprint Dive into the research topics where Sven Warris is active. These topic labels come from the works of this person. Together they form a unique fingerprint.

    • 4 Similar Researchers
    Sequence Alignment Medicine & Life Sciences
    sequence alignment Agriculture & Biology
    genome Agriculture & Biology
    Synchytrium endobioticum Agriculture & Biology
    Chytridiomycota Agriculture & Biology
    Dickeya Agriculture & Biology
    Genome Medicine & Life Sciences
    Boidae Medicine & Life Sciences

    Network Recent external collaboration on country level. Dive into details by clicking on the dots.

    Research Output 2015 2020

    Development and evaluation of two TaqMan assays for generic detection of Dickeya species

    Zijlstra, C., De Haas, L. G., Krijger, M., Verstappen, E., Warris, S., de Haan, E. & van der Wolf, J., Jan 2020, In : European Journal of Plant Pathology. 156, p. 311-316 6 p.

    Research output: Contribution to journal › Article › Academic › peer-review

    Open Access
    Dickeya
    assays
    DNA
    Erwinia chrysanthemi
    potatoes

    Application of high performance compute technology in bioinformatics

    Warris, S., 2019, Wageningen: Wageningen University. 156 p.

    Research output: Thesis › internal PhD, WU

    Open Access
    2 Citations (Scopus)

    Comparative genomics of chytrid fungi reveal insights into the obligate biotrophic and pathogenic lifestyle of Synchytrium endobioticum

    van de Vossenberg, B. T. L. H., Warris, S., Nguyen, H. D. T., van Gent-Pelzer, M. P. E., Joly, D. L., van de Geest, H. C., Bonants, P. J. M., Smith, D. S., Lévesque, A. C. & van der Lee, T. A. J., 17 Jun 2019, In : Scientific Reports. 9, 1, 8672.

    Research output: Contribution to journal › Article › Academic › peer-review

    Open Access
    Synchytrium endobioticum
    Chytridiomycota
    lifestyle
    genomics
    fungi

    Use of disease suppressiveness in the battle against potato blackleg

    van der Wolf, J. M., Coipan, E. C., Krijger, M. C., Kastelein, P., Nijhuis, E. H., Kurm, V., Warris, S. & Fokkema, J., 2019.

    Research output: Contribution to conference › Abstract › Academic

    1 Citation (Scopus)

    Correcting palindromes in long reads after whole-genome amplification

    Warris, S., Schijlen, E. G. W. M., van de Geest, H. C., Vegesna, R., Hesselink, T., te Lintel Hekkert, B., Sanchez Perez, G. F., Medvedev, P., Makova, K. D. & de Ridder, D., 6 Nov 2018, In : BMC Genomics. 19, 798.

    Research output: Contribution to journal › Article › Academic › peer-review

    Open Access
    Genome
    DNA
    Chromosomes
    Technology

    Datasets

    Whole-genome amplification (WGA) create specific chimeric fragments, which consist mainly of palindrome sequences. We developed the tool Pacasus to detect and correct these palindromic sequences in long reads, for example from PacBio and Nanopore

    Warris, S. (Creator), Schijlen, E. (Creator), van de Geest, H. C. (Creator), Vegesna, R. (Creator), Hesselink, T. (Creator), te Lintel Hekkert, B. (Creator), Sanchez Perez, G. F. (Creator), Medvedev, P. (Creator), Makova, K. D. (Creator), de Ridder, D. (Creator), Wageningen UR, 31 Jul 2017

    https://www.ebi.ac.uk/ena/data/view/PRJEB21791

    Dataset

    Fusarium poae Genome sequencing and assembly

    Vanheule, A. (Creator), Audenaert, K. (Creator), Warris, S. (Creator), van de Geest, H. C. (Creator), Schijlen, E. (Creator), Höfte, M. (Creator), De Saeger, S. (Creator), Haesaert, G. (Creator), Waalwijk, C. (Creator), van der Lee, T. (Creator), Wageningen UR, 3 Jun 2016

    http://www.ebi.ac.uk/ena/data/view/PRJNA319914

    Dataset

    Activities 2016 2019

    • 4 Oral presentation

    Use of disease suppressiveness in the battle against potato blackleg

    J.M. van der Wolf (Speaker), E.C. Coipan (Contributor), M.C. Krijger (Contributor), P. Kastelein (Contributor), E.H. Nijhuis (Contributor), V. Kurm (Contributor), S. Warris (Contributor), J. Fokkema (Contributor)
    Sep 2019

    Activity: Talk or presentation › Oral presentation

    Biologische indicatoren voor bodemweerbaarheid.

    J. Postma (Speaker), J. Bloem (Contributor), S. Warris (Contributor), E.H. Nijhuis (Contributor)
    1 Nov 2018

    Activity: Talk or presentation › Oral presentation

    Professional, easy to use and robust bioinformatic tools

    S. Warris (Speaker), T.A.J. van der Lee (Contributor)
    12 Dec 2018

    Activity: Talk or presentation › Oral presentation

    Characterization of Pseudomonas species causing brown blotch of Agaricus bisporis

    J.M. van der Wolf (Speaker), P. Kastelein (Contributor), M.C. Krijger (Contributor), M.J.A. Hendriks (Contributor), T.A.J. van der Lee (Contributor), S. Warris (Contributor), W. Stol (Contributor), J.G.M. Amsing (Contributor)
    30 May 2016

    Activity: Talk or presentation › Oral presentation

    Projects 2019 2019

    Microservices to connect genetic maps to (pan)genomes (KB-38-001-015)

    Warris, S.

    1/01/19 → 31/12/19

    Project: EZproject