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Research Output 2004 2019

2019

Bacterial community dynamics in lait caillé, a traditional product of spontaneous fermentation from Senegal

Groenenboom, A. E., Parker, M. E., De Vries, A., de Groot, S., Zobrist, S., Mansen, K., Milani, P., Kort, R., Smid, E. J. & Schoustra, S. E., 10 May 2019, In : PLoS ONE. 14, 5, e0215658.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Senegal
Probiotics
bacterial communities
Fermentation
probiotics
3 Citations (Scopus)

Environmental hotspots for azole resistance selection of aspergillus fumigatus, the netherlands

Schoustra, S. E., Debets, A. J. M., Rijs, A. J. M. M., Zhang, J., Snelders, E., Leendertse, P. C., Melchers, W. J. G., Rietveld, A. G., Zwaan, B. J. & Verweij, P. E., 1 Jul 2019, In : Emerging Infectious Diseases. 25, 7, p. 1347-1353

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Azoles
Aspergillus fumigatus
Netherlands
epoxiconazole
Aspergillus

Fermented cereal-based Munkoyo beverage: Processing practices, microbial diversity and aroma compounds

Phiri, S., Schoustra, S. E., van den Heuvel, J., Smid, E. J., Shindano, J. & Linnemann, A., 22 Oct 2019, In : PLoS ONE. 14, 10, e0223501.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Beverages
odor compounds
Fermentation
beverages
bacterial communities
1 Citation (Scopus)

Relevance of heterokaryosis for adaptation and azole-resistance development in Aspergillus fumigatus

Zhang, J., Snelders, E. E., Zwaan, B. J., Schoustra, S. E., Kuijper, E. J., Arendrup, M. C., Melchers, W. J. G., Verweij, P. E. & Debets, A. J. M., 13 Feb 2019, In : Proceedings of the Royal Society B: Biological Sciences. 286, 1896, 20182886.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
heterokaryon
azoles
Azoles
Aspergillus fumigatus
Aspergillus

Robust sampling and preservation of DNA for microbial community profiling in field experiments

Groenenboom, A. E., Smid, E. J. & Schoustra, S. E., 22 Mar 2019, In : BMC Research Notes. 12, 1, 159.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Fermented milk
Sampling
Cultured Milk Products
DNA
Experiments
1 Citation (Scopus)

The art of mabisi production: A traditional fermented milk

Moonga, H. B., Schoustra, S. E., Linnemann, A. R., Kuntashula, E., Shindano, J. & Smid, E. J., 14 Mar 2019, In : PLoS ONE. 14, 3, e0213541.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Tonga
Fermented milk
fermented milk
arts
Art
2018
1 Citation (Scopus)

Ecology dictates evolution? about the importance of genetic and ecological constraints in adaptation

de Vos, M. G. J., Schoustra, S. E. & de Visser, J. A. G. M., 17 Jul 2018, In : EPL. 122, 5, 58002.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
ecology
determinants
topography
interactions
2017
28 Citations (Scopus)

A novel environmental azole resistance mutation in Aspergillus fumigatus and a possible role of sexual reproduction in its emergence

Zhang, J., Snelders, E., Zwaan, B. J., Schoustra, S. E., Meis, J. F., van Dijk, K., Hagen, F., van der Beek, M. T., Kampinga, G. A., Zoll, J., Melchers, W. J. G., Verweij, P. E. & Debets, F., 2017, In : mBio. 8, 3, e00791-17.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Azoles
Aspergillus fumigatus
Reproduction
Mutation
Soil
8 Citations (Scopus)
Fungicides
triazoles
Triazoles
Aspergillus fumigatus
sterol

Evolution with natural undefined starters containing lactic acid bacteria

Groenenboom, A. E., Smid, E. J. & Schoustra, S. E., 2017, 12th International Symposium on Lactic Acid Bacteria: Abstract Book. LABsymposium, p. 32-32 A041

Research output: Chapter in Book/Report/Conference proceedingAbstract

5 Citations (Scopus)
Open Access
Beauveria
Beauveria bassiana
malaria
entomopathogenic fungi
virulence
1 Citation (Scopus)

Genomics of compensatory adaptation in experimental populations of Aspergillus nidulans

Dettman, J. R., Rodrigue, N., Schoustra, S. E. & Kassen, R., 2017, In : G3 : Genes Genomes Genetics. 7, 2, p. 427-436

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Aspergillus nidulans
Genomics
Glycerol
Mutation
Population

Influence of production methods on communities of lactic acid bacteria in traditional fermented milk - mabisi

Moonga, H. B., Schoustra, S. E., Linnemann, A. R., Shindano, J. & Smid, E. J., 2017, 12th International Symposium on Lactic Acid Bacteria: Abstract Book. LABsymposium, p. 17-17 A012

Research output: Chapter in Book/Report/Conference proceedingAbstract

2016
15 Citations (Scopus)

Diminishing-returns epistasis among random beneficial mutations in a multicellular fungus

Schoustra, S., Hwang, S., Krug, J. & de Visser, A., 2016, In : Proceedings of the Royal Society. B: Biological Sciences. 283, 1837, 9 p., 20161376.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
epistasis
Fungi
mutation
fungus
Mutation
50 Citations (Scopus)

In-host adaptation and acquired triazole resistance in Aspergillus fumigatus: a dilemma for clinical management

Verweij, P., Zhang, J., Debets, A. J. M., Meis, J. F., Schoustra, S. E., van de Veerdonk, F. L., Zwaan, B. J. & Melchers, W. J. G., 2016, In : The Lancet Infectious Diseases. 16, 11, p. e251-e260

Research output: Contribution to journalArticleAcademicpeer-review

Triazoles
Aspergillus fumigatus
Azoles
Fungi
Aspergillus
2015
17 Citations (Scopus)

Asexual sporulation facilitates adaptation: The emergence of azole resistance in Aspergillus fumigatus

Zhang, J., Debets, A. J. M., Verweij, P. E., Melchers, W. J. G., Zwaan, B. J. & Schoustra, S. E., 2015, In : Evolution. 69, 10, p. 2573-2586

Research output: Contribution to journalArticleAcademicpeer-review

azoles
Azoles
Aspergillus fumigatus
sporulation
mutation
2014
16 Citations (Scopus)

Natural variation in virulence of the entomopathogenic fungus Beauveria bassiana against malaria mosquitoes

Valero Jimenez, C. A., Debets, A. J. M., van Kan, J. A., Schoustra, S. E., Takken, W., Zwaan, B. J. & Koenraadt, C. J. M., 2014, In : Malaria Journal. 13, 8 p., 479.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Beauveria
Culicidae
Malaria
Virulence
Fungi
2013
11 Citations (Scopus)

Deleterious effects of recombination and possible nonrecombinatorial advantages of sex in a fungal model

López-Villavicencio, M., Debets, A. J. M., Slakhorst-Wandel, S. M., Giraud, T. & Schoustra, S. E., 2013, In : Journal of Evolutionary Biology. 26, p. 1968-1978

Research output: Contribution to journalArticleAcademicpeer-review

recombination
outcrossing
gender
sexual reproduction
fungus

Experimental evolution in traditional fermented products

Schoustra, S. E., Shindano, J. & Poulain, A., 2013, In : Nederlands Tijdschrift voor Medische Microbiologie. S21, Suppl., p. S61 1 p.

Research output: Contribution to journalAbstractAcademic

Open Access
26 Citations (Scopus)

Microbial Community Structure of Three Traditional Zambian Fermented Products: Mabisi, Chibwantu and Munkoyo

Schoustra, S. E., Kasase, C., Toarta, C., Kassen, R. & Poulain, A. J., 2013, In : PLoS ONE. 8, 5, e63948.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Batch Cell Culture Techniques
microbial communities
Raw materials
community structure
raw materials
7 Citations (Scopus)

Modelling colony population growth in the filamentous fungus Aspergillus nidulans

Gifford, D. R. & Schoustra, S. E., 2013, In : Journal of Theoretical Biology. 320, p. 124-130

Research output: Contribution to journalArticleAcademicpeer-review

Aspergillus nidulans
Population Growth
Aspergillus
mechanistic models
Fungi
2012
10 Citations (Scopus)

Antagonistic interactions peak at intermediate genetic similarity

Schoustra, S. E., Dench, J., Dali, R., Aaron, S. D. & Kassen, R. K., 2012, In : BMC Microbiology. 12, 40.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Genotype
Pseudomonas aeruginosa
Aptitude
Social Environment
Dermatoglyphics
8 Citations (Scopus)

Correlation of mycelial growth rate with other characters in evolved genotypes of Aspergillus nidulans

Schoustra, S. E. & Punzalan, D., 2012, In : Fungal Biology. 116, p. 630-636

Research output: Contribution to journalArticleAcademicpeer-review

Aspergillus nidulans
genotype
Genotype
Stem Cells
correlated responses
7 Citations (Scopus)

Multivariate phenotypic divergence due to the fixation of beneficial mutations in experimentally evolved lineages of a filamentous fungus

Schoustra, S. E., Punzalan, D., Dali, R., Rundle, H. D. & Kassen, R., 2012, In : PLoS ONE. 7, 11, e50305.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Fungi
mutation
Mutation
fungi
Long Term Evolution (LTE)
2011
13 Citations (Scopus)

Overshooting dynamics in a model adaptive radiation

Meyer, J. R., Schoustra, S. E., LaChapelle, J. & Kassen, R. K., 2011, In : Proceedings of the Royal Society. B: Biological Sciences. 278, p. 392-398

Research output: Contribution to journalArticleAcademicpeer-review

adaptive radiation
dynamic models
Radiation
niches
niche
22 Citations (Scopus)

The length of adaptive walks is insensitive to starting fitness in Aspergillus nidulans

Gifford, D. R., Schoustra, S. E. & Kassen, R. K., 2011, In : Evolution. 65, p. 3070-3078

Research output: Contribution to journalArticleAcademicpeer-review

Aspergillus nidulans
fitness
Genotype
mutation
genotype
2010
39 Citations (Scopus)

Fitness-associated sexual reproduction in a filamentous fungus

Schoustra, S. E., Rundle, H. D., Dali, R. & Kassen, R. K., 2010, In : Current Biology. 20, 15, p. 1-6 6 p.

Research output: Contribution to journalArticleAcademicpeer-review

Transplants
Aspergillus
Fungi
sexual reproduction
Reproduction
16 Citations (Scopus)

Population consequences of mutational events: effects of antibiotic resistance on the r/K trade-off

Fitzsimmons, J., Schoustra, S. E., Kerr, J. T. & Kassen, R. K., 2010, In : Evolutionary Ecology. 24, 1, p. 227-236

Research output: Contribution to journalArticleAcademicpeer-review

antibiotic resistance
carrying capacity
trade-off
common ancestry
population growth
2009
84 Citations (Scopus)

The Properties of Adaptive Walks in Evolving Populations of Fungus

Schoustra, S. E., Bataillon, T., Gifford, D. R. & Kassen, R. K., 2009, In : PloS Biology. 7, 11, e1000250.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Fungi
mutation
Mutation
fungi
Aspergillus
2006

Non-circadian light inducible rhythm in Aspergillus nidulans.

Schoustra, S. E., Slakhorst-Wandel, S. M., Hoekstra, R. F. & Debets, A. J. M., 2006, In : Fungal Genetics Newsletter. 53, p. 23-25

Research output: Contribution to journalArticleAcademicpeer-review

41 Citations (Scopus)

Reducing the cost of resistance; experimental evolution in the filamentous fungus Aspergillus nidulans.

Schoustra, S. E., Debets, A. J. M., Slakhorst-Wandel, S. M. & Hoekstra, R. F., 2006, In : Journal of Evolutionary Biology. 19, 4, p. 1115-1127

Research output: Contribution to journalArticleAcademicpeer-review

Aspergillus nidulans
fitness
fungus
fungi
fludioxonil
2005
29 Citations (Scopus)

Comparing artificial and natural selection in rate of adaptation to genetic stress in Aspergillus nidulans

Schoustra, S. E., Slakhorst-Wandel, S. M., Debets, A. J. M. & Hoekstra, R. F., 2005, In : Journal of Evolutionary Biology. 18, 4, p. 771-778

Research output: Contribution to journalArticleAcademicpeer-review

Aspergillus nidulans
artificial selection
fungicide
natural selection
fungicides