Photo of Sandra Smit
Contact information

Sandra Smit

dr.

    20092019
    If you made any changes in Pure these will be visible here soon.

    Fingerprint Dive into the research topics where Sandra Smit is active. These topic labels come from the works of this person. Together they form a unique fingerprint.

    • 14 Similar Researchers
    Genome Medicine & Life Sciences
    genome Agriculture & Biology
    Genomics Medicine & Life Sciences
    Parasponia Agriculture & Biology
    Lycopersicon esculentum Medicine & Life Sciences
    genomics Agriculture & Biology
    Genes Engineering & Materials Science
    Solanum Medicine & Life Sciences

    Network Recent external collaboration on country level. Dive into details by clicking on the dots.

    Research Output 2012 2018

    22 Citations (Scopus)

    Comparative genomics of the nonlegume Parasponia reveals insights into evolution of nitrogen-fixing rhizobium symbioses

    van Velzen, R., Holmer, R., Bu, F., Rutten, L. J. J., van Zeijl, A. L., Liu, W., Santuari, L., Cao, Q., Sharma, T., Shen, D., Purwana Roswanjaya, Y., Wardhani, T., Seifi Kalhor, M., Jansen, J., van den Hoogen, D. J., Güngör, B., Hartog, M. V., Hontelez, J., Verver, J., Yang, W-C. & 11 othersSchijlen, E. G. W. M., Repin, R., Schilthuizen, M., Schranz, M. E., Heidstra, R., Miyata, K., Fedorova, E., Kohlen, W., Bisseling, A. H. J., Smit, S. & Geurts, R., 15 May 2018, In : Proceedings of the National Academy of Sciences of the United States of America. 115, 20, p. E4700-E4709

    Research output: Contribution to journal › Article › Academic › peer-review

    Open Access
    Parasponia
    Rhizobium
    symbiosis
    nodulation
    genomics
    63 Citations (Scopus)

    Computational pan-genomics: status, promises and challenges

    Marschall, T., de Ridder, D., Sheikhizadeh Anari, S. & Smit, S., 1 Jan 2018, In : Briefings in Bioinformatics. 19, 1, p. 118-135

    Research output: Contribution to journal › Article › Academic › peer-review

    Open Access
    Genomics
    Genes
    Genome
    Computational Biology
    Bioinformatics

    Efficient inference of homologs in large eukaryotic pan-proteomes

    Sheikhizadeh Anari, S., de Ridder, D., Schranz, M. E. & Smit, S., 26 Sep 2018, In : BMC Bioinformatics. 19, 1, 11 p.

    Research output: Contribution to journal › Article › Academic › peer-review

    Open Access
    Proteome
    Genomics
    Homology
    Proteins
    Fungi
    27 Citations (Scopus)

    Coping with living in the soil: The genome of the parthenogenetic springtail Folsomia candida

    Faddeeva-Vakhrusheva, A., Kraaijeveld, K., Derks, M. F. L., Anvar, S. Y., Agamennone, V., Suring, W., Kampfraath, A. A., Ellers, J., Le Ngoc, G., van Gestel, C. A. M., Mariën, J., Smit, S., van Straalen, N. M. & Roelofs, D., 2017, In : BMC Genomics. 18, 14 p., 493.

    Research output: Contribution to journal › Article › Academic › peer-review

    Open Access
    Candida
    Soil
    Genome
    Multigene Family
    Wolbachia
    6 Citations (Scopus)

    Enhancing faba bean (Vicia faba L.) genome resources

    Cooper, J. W., Wilson, M. H., Derks, M. F. L., Smit, S., Kunert, K. J., Cullis, C. & Foyer, C. H., 2017, In : Journal of Experimental Botany. 68, 8, p. 1941-1953

    Research output: Contribution to journal › Article › Academic › peer-review

    Open Access
    Vicia faba
    faba beans
    unigenes
    organelle genome
    Genome

    Projects 2009 2019

    Resolving the extreme photosynthetic efficiency at high light of grey mustard (Hirschfeldia incana)

    Garassino, F., Aarts, M., Harbinson, J. & Smit, S.

    1/03/19 → …

    Project: PhD

    Pangenomic applications for plants and pathogens

    Jonkheer, E., Smit, S., de Ridder, D. & van der Lee, T.

    15/09/18 → …

    Project: PhD

    Exploiting copy number variation for rapid improvement of abiotic stress tolerance in crops

    Wijfjes, R., Smit, S. & de Ridder, D.

    15/09/16 → …

    Project: PhD

    Pangenomics for Crops

    Sheikhizadeh Anari, S., Schranz, E., Smit, S. & de Ridder, D.

    1/10/14 → …

    Project: PhD

    Comparative bioinformatics to underpin the nitrogen fixing rhizobium symbiosis in the non-legume Parasponia

    Holmer, R., Bisseling, T., Geurts, R. & Smit, S.

    17/07/14 → …

    Project: PhD

    Datasets

    Data from: Comparative genomics of the nonlegume Parasponia reveals insights into evolution of nitrogen-fixing rhizobium symbioses

    van Velzen, R. (Creator), Holmer, R. (Creator), Bu, F. (Creator), Rutten, L. J. J. (Creator), van Zeijl, A. (Creator), Liu, W. (Creator), Santuari, L. (Creator), Cao, Q. (Creator), Sharma, T. (Creator), Shen, D. (Creator), Roswanjaya, Y. (Creator), Wardhani, T. (Creator), Seifi Kalhor, M. (Creator), Jansen, J. (Creator), van den Hoogen, D. J. (Creator), Gungor, B. (Creator), Hartog, M. (Creator), Hontelez, J. (Creator), Verver, J. W. G. (Creator), Yang, W. (Creator), Schijlen, E. (Creator), Repin, R. (Creator), Schilthuizen, M. (Creator), Schranz, E. (Creator), Heidstra, R. (Creator), Miyata, K. (Creator), Fedorova, E. (Creator), Kohlen, W. (Creator), Bisseling, T. (Creator), Smit, S. (Creator), Geurts, R. (Creator), Wageningen University & Research, 3 May 2018

    DOI: 10.5061/dryad.fq7gv88

    Dataset

    Beauveria bassiana Genome sequencing and assembly

    Valero Jimenez, C. (Creator), Faino, L. (Creator), Spring in 'T Veld, D. (Creator), Smit, S. (Creator), Zwaan, B. (Creator), van Kan, J. (Creator), Wageningen University, 8 Jul 2016

    https://www.ncbi.nlm.nih.gov/bioproject/PRJNA260878/

    Dataset