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Research Output 2001 2019

2019

Exploring the molecular hub in plant elongation responses: regulation of PHYs and PIFs

Shapulatov, U., 2019, Wageningen: Wageningen University. 192 p.

Research output: Thesisinternal PhD, WUAcademic

Open Access
2 Citations (Scopus)

Substrate promiscuity of enzymes from the sesquiterpene biosynthetic pathways from Artemisia annua and Tanacetum parthenium allows for novel combinatorial sesquiterpene production

Beyraghdar Kashkooli, A., van der Krol, A. R., Rabe, P., Dickschat, J. S. & Bouwmeester, H., 1 Jul 2019, In : Metabolic Engineering. 54, p. 12-23

Research output: Contribution to journalArticleAcademicpeer-review

Tanacetum parthenium
Artemisia annua
Terpenes
Metabolic engineering
Metabolic Engineering
2018
Open Access

From plant to plastic: Metabolic engineering of plant monoterpenes for biobased commodity chemicals

Jongedijk, E., 2018, Wageningen: Wageningen University. 165 p.

Research output: Thesisinternal PhD, WUAcademic

Functional intron-derived miRNAs and host-gene expression in plants

Shapulatov, U., van Hoogdalem, M. D., Schreuder, M. E. L., Bouwmeester, H. J., Abdurakhmonov, I. Y. & van der Krol, A. R., 24 Sep 2018, In : Plant Methods. 14, 83.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
MicroRNAs
Introns
introns
Gene Expression
gene expression
2017
13 Citations (Scopus)

Stable Production of the Antimalarial Drug Artemisinin in the Moss Physcomitrella patens

Khairul Ikram, N. K. B., Beyraghdar Kashkooli, A., Peramuna, A. V., van der Krol, A. R., Bouwmeester, H. & Simonsen, H. T., 15 Aug 2017, In : Frontiers in Bioengineering and Biotechnology. 5, 8 p., 47.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Bryopsida
Bryophyta
Production platforms
Biosynthesis
Antimalarials
2016
Open Access
glycosylation
proteome
plant pathogens
proteomics
plasma membrane
10 Citations (Scopus)

Low-phosphate induction of plastidal stromules is dependent on strigolactones but not on the canonical strigolactone signaling component MAX2

Vismans, G., van der Meer, T., Langevoort, O., Schreuder, M., Bouwmeester, H., Peisker, H., Dörman, P., Ketelaar, T. & van der Krol, S., 2016, In : Plant Physiology. 172, 4, p. 2235-2244

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Plastids
Plant Growth Regulators
Droughts
Fungi
Phosphates

Metabolic engineering of biosynthesis and sequestration of artemisinin

Wang, B., 18 Mar 2016, Wageningen: Wageningen University. 210 p.

Research output: Thesisinternal PhD, WUAcademic

Open Access
artemisinin
metabolic engineering
biosynthesis
Artemisia annua
acids
13 Citations (Scopus)

Monoterpene biosynthesis potential of plant subcellular compartments

Dong, L., Jongedijk, E. J., Bouwmeester, H. J. & van der Krol, A. R., 2016, In : New Phytologist. 209, 2, p. 679-690

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Monoterpenes
geraniol
monoterpenoids
plastids
Plastids
8 Citations (Scopus)

RNA interference for functional genomics and improvement of cotton (Gossypium sp.)

Abdurakhmonov, I. Y., Ayubov, M. S., Ubaydullaeva, K. A., Buriev, Z. T., Shermatov, S. E., Ruziboev, H. S., Shapulatov, U., Saha, S., Ulloa, M., Yu, J. Z., Percy, R. G., Devor, E. J., Sharma, G. C., Sripathi, V. R., Kumpatla, S. P., van der Krol, S., Kater, H. D., Khamidov, K., Salikhov, S. I., Jenkins, J. N. & 2 othersAbdukarimov, A. & Pepper, A. E., 2016, In : Frontiers in Plant Science. 7, FEB2016, 202.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Gossypium
RNA interference
cotton
genomics
safety assessment
2 Citations (Scopus)

Secrets of the world's most popular bedding plant unlocked

van der Krol, S. & Immink, R. G. H., 2016, In : Nature Plants. 2, 16085.

Research output: Contribution to journalArticleAcademicpeer-review

bedding plants
Petunia hybrida
genome
Petunia
ancestry
24 Citations (Scopus)

Transient production of artemisinin in Nicotiana benthamiana is boosted by a specific lipid transfer protein from A. annua

Wang, B., Kashkooli, A. B., Sallets, A., Ting, J., de Ruijter, N. C. A., Olofsson, L., Brodelius, P., Olofsson, L., Boutry, M., Bouwmeester, H. & van der Krol, S., 2016, In : Metabolic Engineering. 38, p. 159-169

Research output: Contribution to journalArticleAcademicpeer-review

Biosynthesis
Staphylococcal Protein A
Artemisia annua
Drug Resistance
Lipids
2015
28 Citations (Scopus)

Capturing of the monoterpene olefin limonene produced in Saccharomyces cerevisiae

Jongedijk, E. J., Cankar, K., Ranzijn, J., van der Krol, A. R., Bouwmeester, H. J. & Beekwilder, M. J., 2015, In : Yeast. 32, 1, p. 159-171

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Monoterpenes
Alkenes
Yeast
Olefins
Saccharomyces cerevisiae
6 Citations (Scopus)

SNARE-RNAi results in higher terpene emission from ectopically expressed caryophyllene synthase in nicotiana benthamiana

Ting, J., Delatte, T. L., Kolkman, P., Misas-Villamil, J. C., Van Der Hoorn, R. A. L., Bouwmeester, H. J. & van der Krol, S., 2015, In : Molecular Plant. 8, 3, p. 454-466

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
SNARE Proteins
Nicotiana benthamiana
Terpenes
RNA Interference
terpenoids
2014

Antiphase light and temperature cycles disrupt rhythmic plant growth : the Arabidopsis jetlag

Bours, R. M. E. H., 2014, Wageningen: Wageningen University. 165 p.

Research output: Thesisinternal PhD, WUAcademic

Open Access
Arabidopsis
plant growth
circadian rhythm
starch
ethylene
4 Citations (Scopus)

Assessment of pleiotropic transcriptome perturbations in Arabidopsis engineered for indirect insect defence

Houshyani Hassanzadeh, B., van der Krol, A. R., Bino, R. J. & Bouwmeester, H. J., 2014, In : BMC Plant Biology. 14, 170.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
transcriptome
Arabidopsis
insects
genetic engineering
statistical analysis

Biosynthesis and transport of terpenes

Ting, H. M., 2014, Wageningen: Wageningen University. 183 p.

Research output: Thesisinternal PhD, WUAcademic

Open Access
terpenoids
biosynthesis
Artemisia annua
artemisinin
chemotypes
16 Citations (Scopus)

Comparison of plant-based expression platforms for the heterologous production of geraniol

Vasilev, N., Schmitz, C., Dong, L., Ritala, A., Imseng, N., Hakkinen, S. T., van der Krol, A. R., Eibl, R., Oksman-Caldentey, K. M., Bouwmeester, H. J., Fischer, R. & Schillberg, S., 2014, In : Plant Cell, Tissue and Organ Culture: an international journal on in vitro culture of higher plants. 117, 3, p. 373-380

Research output: Contribution to journalArticleAcademicpeer-review

geraniol
cell suspension culture
agroinfiltration
transgenic plants
biomass

Discovery and reconstitution of the secoiridoid pathway of Catharanthus roseus

Dong, L., 2014, Wageningen: Wageningen University. 201 p.

Research output: Thesisinternal PhD, WUAcademic

Open Access
indole alkaloids
Catharanthus roseus
terpenoids
tobacco
genes
32 Citations (Scopus)

Elucidation and in planta reconstitution of the parthenolide biosynthetic pathway

Liu, Q., Manzano, D., Tanic, N., Pesic, M., Bankovic, J., Pateraki, I., Ricard, L., Ferrer, A., de Vos, R. C. H., van der Krol, A. R. & Bouwmeester, H. J., 2014, In : Metabolic Engineering. 23, p. 145-153

Research output: Contribution to journalArticleAcademicpeer-review

Biosynthetic Pathways
Tanacetum parthenium
Genes
Biosynthesis
Gene encoding
15 Citations (Scopus)

Evaluation of tobacco (Nicotiana tabacum L. cv. Petit Havana SR1) hairy roots for the production of geraniol, the first committed step in terpenoid indole alkaloid pathway

Ritala, A., Dong, L., Imseng, N., Seppanen-Laakso, T., Vasilev, N., van der Krol, A. R., Rischer, H., Maaheimo, H., Virkki, A., Brandli, J., Schillberg, S., Eibl, R., Bouwmeester, H. J. & Oksman-Caldentey, K. M., 2014, In : Journal of Biotechnology. 176, p. 20-28

Research output: Contribution to journalArticleAcademicpeer-review

Secologanin Tryptamine Alkaloids
Alkaloids
Tobacco
Fragrances
Glycosides
20 Citations (Scopus)

Metabolic flux phenotype of tobacco hairy roots engineered for increased geraniol production

Masakapalli, S. K., Ritala, A., Dong, L. M., van der Krol, A. R., Oksman-Caldentey, K. M., Ratcliffe, R. G. & Sweetlove, L. J., 2014, In : Phytochemistry. 99, p. 73-85

Research output: Contribution to journalArticleAcademicpeer-review

geraniol
Tobacco
tobacco
Fluxes
Phenotype
22 Citations (Scopus)

Natural products – learning chemistry from plants

Staniek, A., Bouwmeester, H. J., Fraser, P. D., Kayser, O., Martens, S., Tissier, A., van der Krol, A. R., Wessjohann, L. & Warzecha, H., 2014, In : Biotechnology Journal. 9, 3, p. 326-336

Research output: Contribution to journalReview articleAcademicpeer-review

Biological Products
Learning
Biosynthetic Pathways
Genome
Enzymes
126 Citations (Scopus)

Rice cytochrome P450 MAX1 homologs catalyze distinct steps in strigolactone biosynthesis

Zhang, Y., van Dijk, A. D. J., Scaffidi, A., Flematti, G. R., Hofmann, M., Charnikhova, T., Verstappen, F. W. A., Hepworth, J., van der Krol, A. R. & Leyser, O., 2014, In : Nature Chemical Biology. 10, p. 1028-1033

Research output: Contribution to journalArticleAcademicpeer-review

Cytochrome P-450 Enzyme System
Carotenoids
Growth
Enzymes
Dioxygenases
21 Citations (Scopus)

Striga hermonthica MAX2 restores branching but not the Very Low Fluence Response in the Arabidopsis thaliana max2 mutant

Liu, Q., Zhang, Y., Matusovaa, R., Charnikhova, T., Amini, M., Jamil, M., Fernandez-Aparicio, M., Huang, K., Timko, M. P., Westwood, J. H., Ruyter-Spira, C. P., van der Krol, A. R. & Bouwmeester, H. J., 2014, In : New Phytologist. 202, 2, p. 531-541

Research output: Contribution to journalArticleAcademicpeer-review

Striga
Striga hermonthica
Arabidopsis
branching
Arabidopsis thaliana
179 Citations (Scopus)

The seco-iridoid pathway from Catharanthus roseus

Miettinen, K., Dong, L., Navrot, N., Burlat, V., Schneider, T., Pollier, J., Woittiez, L. S., van der Krol, A. R., Lugan, R., Llc, T., Verpoorte, R., Oksman-Caldentey, K. M., Martinoia, E. & Bouwmeester, H. J., 2014, In : Nature Communications. 5, 12 p., 3606.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Secologanin Tryptamine Alkaloids
Catharanthus
alkaloids
Biosynthesis
Iridoids
2013
3 Citations (Scopus)

An Improved Agrobacterium tumefaciens Mediated Transformation of Artemisia annua L. by Using Stem Internodes as Explants

Tian, N. A., Liu, S., Huang, J., van der Krol, A. R., Bouwmeester, H. J. & Liu, Z., 2013, In : Czech Journal of Genetics and Plant Breeding. 49, 3, p. 123-129

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Artemisia annua
Agrobacterium tumefaciens
Agrobacterium radiobacter
internodes
Agrobacterium
15 Citations (Scopus)

Antiphase light and temperature cycles affect PHYTOCHROME B-controlled ethylene sensitivity and biosynthesis, limiting leaf movement and growth of Arabidopsis.

Bours, R. M. E. H., van Zanten, M., Pierik, R., Bouwmeester, H. J. & van der Krol, A. R., 2013, In : Plant Physiology. 163, 2, p. 882-895

Research output: Contribution to journalArticleAcademicpeer-review

Photoperiod
Arabidopsis
ethylene
biosynthesis
ethylene production
14 Citations (Scopus)

A Salicylic Acid–Induced Lectin-Like Protein Plays a Positive Role in the Effector-Triggered Immunity Response of Arabidopsis thaliana

Armijo, G., Salinas, P., Monteoliva, M. I., Garcia, C., Seguel, A., Villarroel-Candia, E., Song, W., van der Krol, A. R., Alvarez, M. E. & Holuigue, L., 2013, In : Molecular Plant-Microbe Interactions. 26, 12, p. 1395-1406

Research output: Contribution to journalArticleAcademicpeer-review

Salicylic Acid
Arabidopsis
Lectins
salicylic acid
lectins

Elucidation of the sesquiterpene lactone biosynthetic pathway in feverfew (Tanacetum parthenium)

Liu, Q., 2013, Wageningen: Wageningen UR. 134 p.

Research output: Thesisinternal PhD, WUAcademic

Open Access
Tanacetum parthenium
sesquiterpenoid lactones
biochemical pathways
trichomes
metabolic engineering
48 Citations (Scopus)

Geraniol hydroxylase and hydroxygeraniol oxidase activities of the CYP76 family of cytochrome P450 enzymes and potential for engineering the early steps of the (seco)iridoid pathway.

Hofer, R., Dong, L., Andre, F., Ginglinger, J. F., Lugan, R., Gavira, C., Grec, S., Lang, G., Memelink, J., van der Krol, A. R., Bouwmeester, H. J. & Werck-Reichhart, D., 2013, In : Metabolic Engineering. 20, p. 221-232

Research output: Contribution to journalArticleAcademicpeer-review

Cytochromes
Mixed Function Oxygenases
Cytochrome P-450 Enzyme System
Oxidoreductases
Enzymes

Light signal perception in Arabidopsis rosettes

Evers, J. B., Pierik, R. & van der Krol, A. R., 2013, Proceedings of the 7th International Conference on Functional-Structural Plant Models, 9-14 June 2013, Saariselkä, Finland. p. 243-245

Research output: Chapter in Book/Report/Conference proceedingConference contributionProfessional

Open Access
Arabidopsis
vegetation
leaves
38 Citations (Scopus)

N-glycan occupancy of Arabidopsis N-glycoproteins

Song, W., Mentink, R., Henquet, M. G. L., Cordewener, J. H. G., van Dijk, A. D. J., Bosch, H. J., America, A. H. P. & van der Krol, A. R., 2013, In : Journal of Proteomics. 93, p. 343-355

Research output: Contribution to journalArticleAcademicpeer-review

Arabidopsis
Polysaccharides
Peptide-N4-(N-acetyl-beta-glucosaminyl) Asparagine Amidase
Glycoproteins
Glycopeptides
40 Citations (Scopus)

The metabolite chemotype of Nicotiana benthamiana transiently expressing artemisinin biosynthetic pathway genes is a function of CYP71AV1 type and relative gene dosage

Ting, H. M., Wang, B., Ryden, A. M., Woittiez, L. S., Verstappen, F. W. A., Ruyter-Spira, C. P., Beekwilder, M. J., Bouwmeester, H. J., van der Krol, A. R. & van Herpen, T. W. J. M., 2013, In : New Phytologist. 199, 2, p. 352-366

Research output: Contribution to journalArticleAcademicpeer-review

gene dosage
artemisinin
Gene Dosage
Nicotiana benthamiana
chemotypes
36 Citations (Scopus)

The role of the potato (Solanum tuberosum) CCD8 gene in stolon and tuber development

Pasare, S. A., Ducreux, L. J. M., Morris, W. L., Campbell, R., Sharma, S. K., Roumeliotis, E., Kohlen, W., van der Krol, A. R., Bramley, P. M., Roberts, A. G., Fraser, P. D. & Taylor, M. A., 2013, In : New Phytologist. 198, 4, p. 1108-1120

Research output: Contribution to journalArticleAcademicpeer-review

Carotenoids
Solanum tuberosum
tubers
carotenoids
potatoes
2012
1 Citation (Scopus)

Capturing hormonal and light interactions in a simulation model of shoot branching

Evers, J. B. & van der Krol, A. R., 2012, Plant Growth Modelling, Simulation, Visualization and Applications - PMA12, Shanghai, China, 31 October - 3 November 2012. Beijing: IEEE, p. 101-108

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademic

5 Citations (Scopus)
Manihot
Manihot esculenta
cassava
Organism Cloning
molecular cloning
20 Citations (Scopus)

OSCILLATOR: A system for analysis of diurnal leaf growth using infrared photography combined with wavelet transformation

Bours, R. M. E. H., Muthuraman, M., Bouwmeester, H. J. & van der Krol, A. R., 2012, In : Plant Methods. 8, 29.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
infrared photography
systems analysis
Photography
Systems Analysis
Growth
2011
5 Citations (Scopus)

Characterization of the single-chain Fv-Fc antibody MBP10 produced in Arabidopsis alg3 mutant seeds

Henquet, M. G. L., Eigenhuijsen, J., Hesselink, T., Spiegel, H., Schreuder, M. E. L., van Duijn, E., Cordewener, J. H. G., Depicker, A., van der Krol, A. R. & Bosch, H. J., 2011, In : Transgenic Research. 20, 5, p. 1033-1042

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Single-Chain Antibodies
Arabidopsis
Polysaccharides
Seeds
polysaccharides
37 Citations (Scopus)

N-glycoproteomics in plants: Perspectives and challenges

Song, W., Henquet, M. G. L., Mentink, R., van Dijk, A. D. J., Cordewener, J. H. G., Bosch, H. J., America, A. H. P. & van der Krol, A. R., 2011, In : Journal of Proteomics. 74, 8, p. 1463-1474

Research output: Contribution to journalReview articleAcademicpeer-review

Polysaccharides
Plant Development
Glycopeptides
Golgi Apparatus
Processing
55 Citations (Scopus)

Understanding shoot branching by modelling form and function

Evers, J. B., van der Krol, A. R., Vos, J. & Struik, P. C., 2011, In : Trends in Plant Science. 16, 9, p. 464-467

Research output: Contribution to journalReview articleAcademicpeer-review

branching
shoots
methodology
2010
9 Citations (Scopus)

Calcium signaling during the plant-plant interaction of parasitic Cuscuta reflexa with its hosts

Albert, M., Kaiser, B., van der Krol, A. R. & Kaldenhoff, R., 2010, In : Plant Signaling & Behavior. 5, 9, p. 1144-1146

Research output: Contribution to journalArticleAcademicpeer-review

Cuscuta reflexa
calcium
host plants
tomatoes
infection
345 Citations (Scopus)

Conserved fungal LysM effector Ecp6 prevents chitin-triggered immunity in plants

de Jonge, R., van Esse, H. P., Kombrink, A., Shinya, T., Desaki, Y., Bours, R. M. E. H., van der Krol, A. R., Shibuya, N., Joosten, M. H. A. J. & Thomma, B. P. H. J., 2010, In : Science. 329, p. 953-955

Research output: Contribution to journalArticleAcademicpeer-review

chitin
immunity
pathogens
oligosaccharides
cell walls
9 Citations (Scopus)

Cuscuta reflexa invasion induces Ca2+ release in its host

Albert, M., van der Krol, A. R. & Kaldenhoff, R., 2010, In : Plant Biology. 12, 3, p. 554-557

Research output: Contribution to journalArticleAcademicpeer-review

Cuscuta reflexa
Cuscuta
tomatoes
calcium
signal transduction
2 Citations (Scopus)

Differential effects of human and plant N-acetylglucosaminyltransferase I (GnTI) in plants

Henquet, M. G. L., Heinhuis, B., Borst, J. W., Eigenhuijsen, J., Schreuder, M., Bosch, D. & van der Krol, A. R., 2010, In : Transgenic Research. 19, 4, p. 535-547

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Protoplasts
protoplasts
proteins
Proteins
Protein Stability

Hormonal regulation of branching modulated by light quality

Evers, J. B. & van der Krol, A. R., 2010, Proceedings of the 6th International Workshop on Functional-Structural Plant Models, Davis, California USA, 12-17 September 2010. Davis, USA: University of California, p. 149-151

Research output: Chapter in Book/Report/Conference proceedingAbstractAcademic

2009
32 Citations (Scopus)

LEW3, encoding a putative a-1,2-mannosyltransferase (ALG11) in N-linked glycoprotein, plays vital roles in cell-wall biosynthesis and the abiotic stress response in Arabidopsis thaliana

Zhang, M., Henquet, M. G. L., Chen, Z., Zhang, H., Zhang, Y., Ren, X., van der Krol, A. R., Gonneau, M., Bosch, H. J. & Gong, Z., 2009, In : The Plant Journal. 60, 6, p. 983-999

Research output: Contribution to journalArticleAcademicpeer-review

Mannosyltransferases
wilting
Glycosylation
Arabidopsis
Cell Wall

N-glycosylation in plants: science and application

Henquet, M. G. L., 2009, [S.l.]: S.n.. 153 p.

Research output: Thesisinternal PhD, WUAcademic

Open Access
glycosylation
polysaccharides
mutants
probes (equipment)
glycoproteins
2008

ADREM: the Dutch approach to Adhesion Remedies

van der Krol, A. R., 2008, In : Gripping Stuff. 2008, 23, p. 23-25

Research output: Contribution to journalArticlePopular