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Research Output 1992 2019

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Article
2019
1 Citation (Scopus)

Comparative analysis of repetitive sequences among species from the potato and the tomato clades

Gaiero Guadagna, P., Vaio, M., Peters, S. A., Schranz, M. E., de Jong, J. H. S. G. M. & Speranza, P. R., 15 Feb 2019, In : Annals of Botany. 123, 3, p. 521-532

Research output: Contribution to journalArticleAcademicpeer-review

repetitive sequences
tomatoes
potatoes
genome
Solanum etuberosum
2018
1 Citation (Scopus)

DNA sequence and shape are predictive for meiotic crossovers throughout the plant kingdom

Demirci, S., Peters, S. A., de Ridder, D. & van Dijk, A. D. J., 1 Aug 2018, In : Plant Journal. 95, 4, p. 686-699 14 p.

Research output: Contribution to journalArticleAcademicpeer-review

Lycopersicon esculentum
Zea mays
Arabidopsis
nucleotide sequences
tomatoes

Intact DNA purified from flow-sorted nuclei unlocks the potential of next-generation genome mapping and assembly in Solanum species

Gaiero, P., Šimková, H., Vrána, J., Santiñaque, F. F., López-Carro, B., Folle, G. A., van de Belt, J., Peters, S. A., Doležel, J. & de Jong, H., 1 Jan 2018, In : MethodsX. 5, p. 328-336

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Solanum
Chromosome Mapping
Genes
DNA
Molecular Weight
5 Citations (Scopus)
Open Access
metabolome
Phaeodactylum tricornutum
Bacillariophyceae
proteome
transcriptome
2017
13 Citations (Scopus)

Botryococcus braunii strains compared for biomass productivity, hydrocarbon and carbohydrate content

Gouveia, J. D. G., Ruiz, J., van den Broek, B., Hesselink, T., Peters, S. A., Kleinegris, D. M. M., Smith, A. G., van der Veen, D., Barbosa, M. J. & Wijffels, R. H., 2017, In : Journal of Biotechnology. 248, p. 77-86

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Carbohydrates
Hydrocarbons
Biomass
Productivity
Weights and Measures
12 Citations (Scopus)
Euchromatin
Lycopersicon esculentum
inbred lines
cold zones
tomatoes
4 Citations (Scopus)

Identification of methylated GnTI-dependent N-glycans in Botryococcus brauni

Schulze, S., Urzica, E., Reijnders, M. J. M. F., van de Geest, H., Warris, S., Bakker, L. V., Fufezan, C., Martins dos Santos, V. A. P., Schaap, P. J., Peters, S. A. & Hippler, M., 2017, In : New Phytologist. 215, 4, p. 1361-1369

Research output: Contribution to journalArticleAcademicpeer-review

Botryococcus
Polysaccharides
polysaccharides
Microalgae
microalgae
2015
5 Citations (Scopus)

Cnidaria: fast, reference-free clustering of raw and assembled genome and transcriptome NGS data

Aflitos, S. A., Severing, E. I., Sanchez Perez, G. F., Peters, S. A., de Jong, H. & de Ridder, D., 2015, In : BMC Bioinformatics. 16, 1, 10 p., 352.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Cnidaria
Transcriptome
Cluster Analysis
Genome
Genes
13 Citations (Scopus)

Introgression Browser: High throughput whole-genome SNP visualization

Aflitos, S. A., Sanchez Perez, G. F., de Ridder, D., Fransz, P., Schranz, M. E., de Jong, J. H. S. G. M. & Peters, S. A., 2015, In : The Plant Journal. 82, 1, p. 174-182

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
introgression
Single Nucleotide Polymorphism
Genome
genome
Lycopersicon esculentum
2014
135 Citations (Scopus)
Solanum
Lycopersicon esculentum
tomatoes
Single Nucleotide Polymorphism
Genome
2012
19 Citations (Scopus)

SNP markers retrieval for a non-model species: a practical approach

Shahin, A., van Gurp, T. P., Peters, S. A., Visser, R. G. F., van Tuyl, J. M. & Arens, P., 2012, In : BMC Research Notes. 5, 79.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Single Nucleotide Polymorphism
Genes
Blasting
Polymorphism
Redundancy
22 Citations (Scopus)

Structural homology in the Solanaceae: analysis of genomic regions in support of synteny studies in tomato, potato and pepper

Peters, S. A., Bargsten, J. W., Szinay, D., van de Belt, J., Visser, R. G. F., Bai, Y. & de Jong, H., 2012, In : The Plant Journal. 71, 4, p. 602-614

Research output: Contribution to journalArticleAcademicpeer-review

Solanaceae
Synteny
Lycopersicon esculentum
Solanum tuberosum
pepper
1512 Citations (Scopus)

The tomato genome sequence provides insights into fleshy fruit evolution

Sato, S., Tabata, S., Hirakawa, H., Klein Lankhorst, R. M., de Jong, H., van Ham, R. C. H. J., Datema, E., Smit, S., Schijlen, E. G. W. M., van Haarst, J. C., Peters, S. A., Henkens, M. H. C., van Staveren, M. J., Mooijman, P. J. W., Hesselink, T., van de Belt, J., Szinay, D., Bai, Y. & Visser, R. G. F., 2012, In : Nature. 485, p. 635-641

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Solanum
tomatoes
fruits
genome
potatoes
2010
50 Citations (Scopus)

Complete genome sequence and taxonomic position of anguillid herpesvirus 1

van Beurden, S. J., Bossers, A., Voorbergen-Laarman, H. A., Haenen, O. L. M., Peters, S. A., Abma-Henkens, M. H. C., Peeters, B. P. H., Rottier, P. J. M. & Engelsma, M. Y., 2010, In : Journal of General Virology. 91, 4, p. 880-887

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Herpesviridae
Genome
Eels
Ictalurivirus
Genes
6 Citations (Scopus)

Evidence for RNA recombination between distinct isolates of Pepino mosaic virus.

Hasiów-Jaroszewska, B., Kuzniar, A., Peters, S. A., Leunissen, J. A. M. & Pospieszny, H., 2010, In : Acta Biochimica Polonica. 57, 3, p. 385-388

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Mosaic Viruses
Viruses
Genetic Recombination
Genes
RNA
2009
20 Citations (Scopus)

Solanum lycopersicum cv. Heinz 1706 chromosome 6: distribution and abundance of genes and retrotransposable elements

Peters, S. A., Datema, E., Szinay, D., van Staveren, M. J., Schijlen, E. G. W. M., van Haarst, J. C., Hesselink, T., Abma-Henkens, M. H. C., Bai, Y., de Jong, J. H., Stiekema, W., Klein Lankhorst, R. M. & van Ham, R. C. H. J., 2009, In : The Plant Journal. 58, 5, p. 857-869

Research output: Contribution to journalArticleAcademicpeer-review

Euchromatin
Chromosomes, Human, Pair 6
Solanum lycopersicum
Lycopersicon esculentum
heterochromatin
2008
60 Citations (Scopus)

Cross-species BAC-FISH painting of the tomato and potato chromosome 6 reveals undescribed chromosomal rearrangements

Tang, X., Szinay, D., Ramanna, M. S., van der Vossen, E. A. G., Datema, E., Klein Lankhorst, R. M., de Boer, J. M., Peters, S. A., Bachem, C. W. B., Stiekema, W. J., Visser, R. G. F., de Jong, J. H. & Bai, Y., 2008, In : Genetics. 180, p. 1319-1328

Research output: Contribution to journalArticleAcademicpeer-review

Paintings
Chromosomes, Human, Pair 6
Lycopersicon esculentum
Solanum tuberosum
Fluorescence In Situ Hybridization
63 Citations (Scopus)

High-resolution chromosome mapping of BACs using multi-colour FISH and pooled-BAC FISH as a backbone for sequencing tomato chromosome 6

Szinay, D., Chang, S. B., Khrustaleva, L. I., Peters, S. A., Schijlen, E. G. W. M., Bai, Y., Stiekema, W., van Ham, R. C. H. J., de Jong, H. & Klein Lankhorst, R. M., 2008, In : The Plant Journal. 56, 4, p. 627-637

Research output: Contribution to journalArticleAcademicpeer-review

Chromosomes, Human, Pair 6
Chromosome Mapping
Euchromatin
Lycopersicon esculentum
fluorescence in situ hybridization
2006
52 Citations (Scopus)

Genome sequence of an enhancin gene-rich nucleopolyhedrovirus (NPV) from Agrotis segetum: collinearity with Spodoptera exigua multiple NPV

Jakubowska, A. K., Peters, S. A., Ziemnicka, J., Vlak, J. M. & van Oers, M. M., 2006, In : Journal of General Virology. 87, 3, p. 537-551 15 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Nucleopolyhedrovirus
Spodoptera
Genome
Baculoviridae
Open Reading Frames
9 Citations (Scopus)

TOPAAS, a tomato and potato assembly assistance system for selection and finishing of bacterial artificial chromosomes 1[W]

Peters, S. A., van Haarst, J. C., Jesse, T., Woltinge, D., Jansen, K., Hesselink, T., van Staveren, M. J., Abma-Henkens, M. H. C. & Klein Lankhorst, R. M., 2006, In : Plant Physiology. 140, p. 805-817

Research output: Contribution to journalArticleAcademicpeer-review

Bacterial Artificial Chromosomes
bacterial artificial chromosomes
Chromosomes, Human, Pair 1
Lycopersicon esculentum
Solanum tuberosum
2003
992 Citations (Scopus)

Complete genome sequence of Lactobacillus plantarum WCFS1

Kleerebezem, M., te Boekhorst, J., van Kranenburg, R., Molenaar, D., Kuipers, O. P., Leer, R., Tarchini, R., Peters, S. A., Sandbrink, H. M., Fiers, M. W. E. J., Stiekema, W. J., Klein Lankhorst, R. M., Bron, P. A., Hoffer, S. M., Nierop Groot, M. N., Kerkhoven, R., de Vries, M. C., Ursing, B., de Vos, W. M. & Siezen, R. J., 2003, In : Proceedings of the National Academy of Sciences of the United States of America. 100, 4, p. 1990-1995

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Lactobacillus plantarum
genome
genes
chromosomes
phosphoketolase
1995
11 Citations (Scopus)

The cowpea mosaic virus RNA 1-encoded 112 kDa protein may function as a VPg precursor in vivo.

Peters, S. A., Mesnard, J. M., Kooter, I. M., Verver, J., Wellink, J. & van Kammen, A., 1995, In : Journal of General Virology. 76, p. 1807-1813

Research output: Contribution to journalArticleAcademicpeer-review

1994
14 Citations (Scopus)

The NTP-binding motif in cowpea mosaic virus B polyprotein is essential for viral replication.

Peters, S. A., Verver, J., Nollen, E. A. A., van Lent, J. W. M., Wellink, J. & van Kammen, A., 1994, In : Journal of General Virology. 75, p. 3167-3176

Research output: Contribution to journalArticleAcademicpeer-review

1992
33 Citations (Scopus)

A regulatory role for the 32K protein in proteolytic processing of cowpea mosaic virus polyproteins.

Peters, S. A., Voorhorst, W. G. B., Wery, J., Wellink, J. & van Kammen, A., 1992, In : Virology. 191, p. 81-89

Research output: Contribution to journalArticleAcademicpeer-review

11 Citations (Scopus)

Processing of VPg-containing polyproteins encoded by the B-RNA from cowpea mosaic virus.

Peters, S. A., Voorhorst, W. G. B., Wellink, J. & van Kammen, A., 1992, In : Virology. 191, p. 90-97

Research output: Contribution to journalArticleAcademicpeer-review