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Research Output 1996 2020

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2019

Big Data analytics in the animal production domain

Kamphuis, C., Mollenhorst, H. & Veerkamp, R. F., Jun 2019.

Research output: Contribution to conferenceAbstractAcademic

Open Access

Breeding for improved feed efficiency and reduced enteric methane of dairy cattle

de Haas, Y. & Veerkamp, R. F. (ed.), 17 Jun 2019.

Research output: Contribution to conferenceAbstractAcademic

Common genomic regions underlie height in humans and stature in cattle

Raymond, B., Yengo, L. (ed.), Costillo, R. (ed.), Schrooten, C. (ed.), Bouwman, A. C. (ed.), Veerkamp, R. F. (ed.), Hayes, B. (ed.) & Visscher, P. M. (ed.), 26 Aug 2019, Book of Abstracts of the 70th Annual Meeting of the European Federation of Animal Science. Ghent, Belgium: Wageningen Academic Publishers, p. 211-211 1 p. (EAAP Annual Meeting; vol. 1, no. 25).

Research output: Chapter in Book/Report/Conference proceedingAbstractAcademic

Detection of reciprocal translocations in pigs using short read sequencing

Bouwman, A. C., te Pas, M. F. W. (ed.), Derks, M. F. L. (ed.), Groenen, M. (ed.), Veerkamp, R. F. (ed.), Broekhuijse, M. (ed.) & Harlizius, B. (ed.), 28 Aug 2019, Book of Abstracts of the 70th Annual Meeting of the European Federation of Animal Science. Wageningen Academic Publishers, p. 255-255 (Book of abstracts EAAP; no. 25).

Research output: Chapter in Book/Report/Conference proceedingAbstractAcademic

Genomic prediction of a binary trait using a threshold model

ten Napel, J., Stranden, I. (ed.), Taskinen, M. R. (ed.), Vandenplas, J. (ed.), Veerkamp, R. F. (ed.) & Matilainen, K. (ed.), 26 Aug 2019, Book of Abstracts of the 70th Annual Meeting of the European Federation of Animal Science. Wageningen: Wageningen Academic Publishers, p. 594-594 (Book of Abstracts).

Research output: Chapter in Book/Report/Conference proceedingAbstractAcademic

High resolution copy number variation analysis using two cattle genome assemblies

Lee, Y. L., Bosse, M. (ed.), Veerkamp, R. F. (ed.), Mullaart, E. (ed.), Groenen, M. (ed.) & Bouwman, A. C. (ed.), 26 Aug 2019, Book of Abstracts of the 70th Annual Meeting of the European Federation of Animal Science. Wageningen Academic Publishers, 209 p. (Book of abstracts EAAP; no. 25).

Research output: Chapter in Book/Report/Conference proceedingAbstractAcademic

Impact of data sub-setting strategies on variance component estimation for Interbeef evaluations

Bonifazi, R., Vandenplas, J., ten Napel, J., Cromie, A., Veerkamp, R. F. & Calus, M. P. L., 26 Aug 2019, Book of Abstracts of the 70th Annual Meeting of the European Federation of Animal Science. Wageningen Academic Publishers, p. 447-447 (EAAP Book of Abstracts; vol. 25).

Research output: Chapter in Book/Report/Conference proceedingAbstractAcademic

Impact of preselection on genetic evaluation of selection candidates using single step GBLUP

Jibrila, I., ten Napel, J. (ed.), Vandenplas, J. (ed.), Veerkamp, R. F. (ed.) & Calus, M. P. L. (ed.), 26 Aug 2019, Book of Abstracts of the 70th Annual Meeting of the European Federation of Animal Science. Wageningen: Wageningen Academic Publishers, p. 449-449 (Book of Abstracts).

Research output: Chapter in Book/Report/Conference proceedingAbstractAcademic

Not all inbreeding is depressing

Doekes, H. P., Veerkamp, R. F., Bijma, P., Hiemstra, S. J., de Jong, G. & Windig, J. J., 26 Aug 2019, Book of Abstracts of the 70th Annual Meeting of the European Federation of Animal Science. Wageningen: Wageningen Academic Publishers, p. 142-142 (Book of Abstracts).

Research output: Chapter in Book/Report/Conference proceedingAbstractAcademic

inbreeding
inbreeding depression
homozygosity
ancestry
calving interval

Selective breeding as a mitigation tool for methane intensity of dairy cattle

de Haas, Y., Koenen, E. (ed.) & Veerkamp, R. F. (ed.), 10 Aug 2019, Proceedings of the 7th GGAA – Greenhouse Gas and Animal Agriculture Conference: August 4th to 8th, Iguassu Falls/Brazil. Berndt, A., Pereira Ribeiro, L. G. & Abdalla, A. L. (eds.). p. 43-43 (Documentos; no. 135).

Research output: Chapter in Book/Report/Conference proceedingAbstractAcademic

Value of gene bank material for the commercial breeding population of Dutch Holstein Friesian cattle

Windig, J. J., Doekes, H. P. (ed.), Veerkamp, R. F. (ed.), Bijma, P. (ed.) & Hiemstra, S. J. (ed.), 26 Aug 2019, Value of gene bank material for the commercial breeding population of Dutch Holstein Friesian cattle. Wageningen: Wageningen Academic Publishers, p. 368-368 (Book of Abstracts).

Research output: Chapter in Book/Report/Conference proceedingAbstractAcademic

Whole genome sequence GWAS reveals muscularity in beef cattle differs across five cattle breeds

Doyle, J. L., Berry, D. P. (ed.), Veerkamp, R. F. (ed.), Carthy, T. R. (ed.), Walsh, S. W. (ed.) & Purfield, D. C. (ed.), 26 Aug 2019, Book of Abstracts of the 70th Annual Meeting of the European Federation of Animal Science. Wageningen: Wageningen Academic Publishers, p. 210-210 (Book of Abstracts).

Research output: Chapter in Book/Report/Conference proceedingAbstractAcademic

2018

An equation to predict accuracy of multi-breed genomic prediction model with multiple random effects

Raymond, B., Bouwman, A. C., Wientjes, Y. C. J., Schrooten, C., Houwing-Duistermaat, J. J. & Veerkamp, R. F., 27 Aug 2018, Book of Abstracts of the 69th Annual Meeting of the European Federation of Animal Science. Wageningen: Wageningen Academic Publishers, p. 121-121 (Book of abstracts; no. 24).

Research output: Chapter in Book/Report/Conference proceedingAbstractAcademic

Boosted regression trees to predict pneumonia, growth and meat percentage of slaughter pigs

Mollenhorst, H., de Greef, K. H., Ducro, B. J., Hulsegge, B., Hoving, A. H., Veerkamp, R. F. & Kamphuis, C., 27 Aug 2018, Book of Abstracts of the 69th Annual Meeting of the European Federation of Animal Science. Wageningen: Wageningen Academic Publishers, p. 437-437 (Book of abstracts; no. 24).

Research output: Chapter in Book/Report/Conference proceedingAbstractAcademic

Development of resilience indicators using deviations in milk yield from the lactation curve

Poppe, H. W. M., Mulder, H. A. & Veerkamp, R. F., Aug 2018, Book of Abstracts of the 69th Annual Meeting of the European Federation of Animal Science. Wageningen Academic Publishers, p. 268-268 (Book of abstracts; vol. 24).

Research output: Chapter in Book/Report/Conference proceedingAbstractAcademic

lactation curve
milk yield
cows
genetic correlation
heat

Implementing genonomic prediction models in generic evaluation of large populations

ten Napel, J., Schopen, G., Vandenplas, J., Cromie, A. R., van Grevenhof, E. M. & Veerkamp, R. F., 27 Aug 2018.

Research output: Contribution to conferenceAbstractAcademic

In-line milk progesterone profiles to estimate genetic parameters for atypical fertility in cows

van Binsbergen, R., Bouwman, A. C. & Veerkamp, R. F., 8 Dec 2018, Book of Abstracts of the 69th Annual Meeting of the European Federation of Animal Science. Wageningen: Wageningen Academic Publishers, p. 285-285 (Book of abstracts; no. 24).

Research output: Chapter in Book/Report/Conference proceedingAbstractAcademic

QTL detection in a breeding pedigree of diploid potato

Korontzis, G., Malosetti, M., Mulder, H. A., Maliepaard, C. A., Víquez Zamora, A. M., Veerkamp, R. F. & van Eeuwijk, F. A., Sep 2018.

Research output: Contribution to conferenceAbstractAcademic

Reliability of breeding values for dry matter intake by adding data from additional research farms

Schopen, G., de Haas, Y., Vosman, J. J., de Jong, G. & Veerkamp, R. F., 27 Aug 2018, Book of Abstracts of the 69th Annual Meeting of the European Federation of Animal Science. Wageningen: Wageningen Academic Publishers, p. 451-451 (Book of abstracts; no. 24).

Research output: Chapter in Book/Report/Conference proceedingAbstractAcademic

Open Access

Towards field specific phosphate applications norms with machine learning

Mollenhorst, H., de Haan, M. H. A., Oenema, J., Hoving, A. H., Veerkamp, R. F. & Kamphuis, C., 27 Aug 2018, Book of Abstracts of the 69th Annual Meeting of the European Federation of Animal Science. Wageningen Academic Publishers, p. 341-341 (Book of abstracts; no. 24).

Research output: Chapter in Book/Report/Conference proceedingAbstractAcademic

Using Data Lake Stack in Animal Sciences

Schokker, D., Athanasiadis, I. N., Visser, B., Veerkamp, R. F. & Kamphuis, C., 12 Dec 2018. 1 p.

Research output: Contribution to conferenceAbstractAcademic

Open Access
2017

Do breath gas measurements hold the key to unlocking the genetics of feed efficiency in dairy cows?

Difford, G., de Haas, Y., Visker, M. H. P. W., Lassen, J., Bovenhuis, H., Veerkamp, R. F. & Lovendahl, P., 28 Aug 2017, Book of Abstracts of the 68th Annual Meeting of the European Federation of Animal Science. Wageningen Academic Publishers, p. 184-184 (Book of abstracts; no. 23).

Research output: Chapter in Book/Report/Conference proceedingAbstractAcademic

The effect of using sequence data instead of a lower density SNP chip on a GWAS

van den Berg, S. J. P., Veerkamp, R. F., van Eeuwijk, F. A., Bouwman, A. C., Lopez, M. S. & Vandenplas, J., 2017, Book of Abstracts of the EAAP Annual Meeting, Tallinn 2017. European Association for Animal Production (EAAP), p. 83-83

Research output: Chapter in Book/Report/Conference proceedingAbstractAcademic

Utility of whole genome sequence data for across breed genomic prediction

Raymond, B., Bouwman, A., Schrooten, C., Houwing-Duistermaat, J. J. & Veerkamp, R. F., 28 Aug 2017, p. 143-143.

Research output: Contribution to conferenceAbstractAcademic

Holstein
breeds
genomics
history
genome
2016

Accuracy of genomic breeding values from endocrine and traditional fertility traits in dairy cows

Tenghe, A. M. M., Berglund, B., Veerkamp, R. F. & De Koning, D. J., 2016, Book of Abstracts of the 67st Annual Meeting of the European Federation of Animal Science. Wageningen Academic Publishers, p. 287-287

Research output: Chapter in Book/Report/Conference proceedingAbstractAcademic

Open Access
bulls
Holstein
genomics
prediction
genome

De rol voor fokkerij bij verbeteren voerefficientie

de Haas, Y. & Veerkamp, R. F., 2016.

Research output: Contribution to conferenceAbstractAcademic

Genetic Architecture of Feed Efficiency in Mid-Lactation Holstein Dairy Cows

Hardie, L. C., van de Haar, M. J., Tempelman, R. J., Weigel, K. A., Armentano, L. E., Wiggans, G. R., Veerkamp, R. F., de Haas, Y., Coffey, M. P., Connor, E. E., Hanigan, M. D., Staples, C. R., Wang, Z. & Spurlock, D. M., 2016.

Research output: Contribution to conferenceAbstractAcademic

Holstein
feed conversion
dairy cows
lactation
feed intake

Genome wide association study (GWAS) of methane emissions in Australian Angus

Manzanilla Pech, C. I. V., de Haas, Y., Veerkamp, R. F., Donoghue, K. A., Arthur, P. F. & Pryce, J. E., 2016, Book of Abstracts of the 67st Annual Meeting of the European Federation of Animal Science. Wageningen Academic Publishers, p. 451-451 (Book of abstracts; no. 22).

Research output: Chapter in Book/Report/Conference proceedingAbstractAcademic

Open Access

Unravelling the genetic background for endocrine fertility traits in dairy cows

Tenghe, A. M. M., Bouwman, A. C., Berglund, B., Strandberg, E. & Veerkamp, R. F., 2016, p. 276-276.

Research output: Contribution to conferenceAbstractAcademic

Open Access

Utilizing low-coverage sequence data in tomato recombinant inbred lines (S. lycopersicum x S. pimpinellifolium)

van Binsbergen, R., Bink, M. C. A. M., Finkers, H. J., Calus, M. P. L., Veerkamp, R. F. & van Eeuwijk, F. A., 2016, Plant Breeding: the art of bringing science to life - Abstracts of the 20th EUCARPIA General Congress. Kölliker, R. & Boller, B. (eds.). Agroscope, Institute for Sustainability Sciences ISS, p. 19 1 p.

Research output: Chapter in Book/Report/Conference proceedingAbstractAcademic

Open Access
2015

Comparing genomic prediction and GWAS with sequence information vs HD or 50k SNP chips

Veerkamp, R. F., van Binsbergen, R., Calus, M. P. L., Schrooten, C. & Bouwman, A. C., 2015, Book of Abstracts 66th Annual Meeting of the EAAP. Wageningen Academic Publishers, Vol. 21. p. 506-506

Research output: Chapter in Book/Report/Conference proceedingAbstractAcademic

Genome-Wide Association Study
Single Nucleotide Polymorphism
Genome
Insemination
Protein Sorting Signals

Evaluating residual feed intake in dairy cattle using marker x environment interaction genomic selection model

Yao, C., de los Campos, G., VandeHaar, M. J., Spurlock, D., Armentano, L., de Haas, Y., Veerkamp, R. F., Coffey, M. & Weigel, K. A., 2015.

Research output: Contribution to conferenceAbstractAcademic

Genetic associations between feed intake and conformation traits in two populations

Manzanilla Pech, C. I. V., Veerkamp, R. F., Tempelman, R. J., Weigel, K. A. & de Haas, Y., 2015, Book of Abstracts of the 66th Annual Meeting of the EAAP. Wageningen Academic Publishers, Vol. 21. p. 289-289

Research output: Chapter in Book/Report/Conference proceedingAbstractAcademic

Netherlands
feed intake
dry matter intake
genetic correlation
heritability

Genomic selection for the high-hanging fruit in livestock breeding programs

Berry, D. P., de Haas, Y., Veerkamp, R. F., Coffey, M. & Calus, M. P. L., 2015.

Research output: Contribution to conferenceAbstractAcademic

Open Access
livestock breeding
marker-assisted selection
genomics
fruits
feed intake

Hierarchical Bayesian inference on genetic and non-genetic components of partial efficiencies determining feed efficiency in dairy cattle

Lu, Y., VandeHaar, M. J., Spurlock, D. M., Weigel, K. A., Armentano, L., Staples, C. R., Connor, E. E., Wang, Z., Coffey, M., Veerkamp, R. F., de Haas, Y., Tempelman, R. J. & Bello, N., 2015.

Research output: Contribution to conferenceAbstractAcademic

dairy cattle
feed conversion
milk
body weight
energy

Is the use of whole-genome sequence data in dairy cattle the future?

van Binsbergen, R., Calus, M. P. L., Bink, M. C. A. M., van Eeuwijk, F. A. & Veerkamp, R. F., 5 Feb 2015.

Research output: Contribution to conferenceAbstractAcademic

Open Access
dairy cattle
marker-assisted selection
genetic markers
genome
animals

Meta-analysis of GWAS of bovine stature with >50,000 animals imputed to whole-genome sequence

Bouwman, A. C., Pausch, H., Govignon-Gion, A., Hoze, C., Sanchez, M. P., Boussaha, M., Boichard, D. A., Sahana, G., Brondum, R. F., Guldbrandtsen, B., Lund, M., Vilkki, J., Sargolzaei, M., Schenkel, F. S., Taylor, J., Hoff, J. L., Schnabel, R. D., Veerkamp, R. F., Goddard, M. E. & Hayes, B. J., 2015, p. 346-346.

Research output: Contribution to conferenceAbstractAcademic

meta-analysis
genome
cattle
quantitative trait loci
animals

Predicting the accuracy of multi-population genomic prediction

Wientjes, Y. C. J., Bijma, P., Veerkamp, R. F. & Calus, M. P. L., 2015, Book of Abstracts 66th Annual Meeting of the EAAP. Wageningen Academic Publishers, Vol. 21. p. 350-350

Research output: Chapter in Book/Report/Conference proceedingAbstractAcademic

prediction
genetic correlation
genomics
quantitative trait loci
heritability

Split-and-merge Bayesian variable selection enables efficient genomic prediction using sequence data

Calus, M. P. L., Schrooten, C. & Veerkamp, R. F., 2015, Book of Abstracts 66th Annual Meeting of the EAAP. Wageningen Academic Publishers, Vol. 21. p. 505-505

Research output: Chapter in Book/Report/Conference proceedingAbstractAcademic

genomics
prediction
split application
genome

The potential of using genomic information across populations

Wientjes, Y. C. J., Veerkamp, R. F., Bijma, P., Bovenhuis, H., Schrooten, C. & Calus, M. P. L., 21 Feb 2015.

Research output: Contribution to conferenceAbstractAcademic

2014

Added value of whole-genome sequence data to genomic predictions in dairy cattle

van Binsbergen, R., Calus, M. P. L., Bink, M. C. A. M., Schrooten, C., van Eeuwijk, F. A. & Veerkamp, R. F., 2014.

Research output: Contribution to conferenceAbstractAcademic

Open Access

Breeding Value for Dry Matter Intake for Dutch Bull based on Combination of DGV for DMI and EBV for Predictors

Veerkamp, R. F., Calus, M. P. L., de Jong, G., van der Linde, R. & de Haas, Y., 2014.

Research output: Contribution to conferenceAbstractAcademic

Estimation of Genetic Parameters and Breeding Values in Honey Bees

Brascamp, E. W., Veerkamp, R. F. & Bijma, P., 2014.

Research output: Contribution to conferenceAbstractAcademic

2013

Accuracy of Imputation to Whole-Genome Sequence Data in Holstein Friesian Cattle

van Binsbergen, R., Bink, M. C. A. M., Calus, M. P. L., Hayes, B., van Eeuwijk, F. A. & Veerkamp, R. F., 2013.

Research output: Contribution to conferenceAbstractAcademic

Holstein
bulls
genome
cattle
genotype

Genetic analysis of atypical progesterone profiles in Holstein cows from experimental research herds

Nyman, S., Johansson, K., Berry, D. P., de Koning, D. J., Veerkamp, R. F., Wall, E. & Berglund, B., 2013.

Research output: Contribution to conferenceAbstractAcademic

Open Access
genetic techniques and protocols
progesterone
Holstein
herds
cows

Genetics of feed efficiency in dairy cattle

de Haas, Y., Pryce, J. & Veerkamp, R. F., 2013, Book of Abstracts of the 64th Annual Meeting of the European Federation of Animal Science. Wageningen Academic Publishers, p. 576-576

Research output: Chapter in Book/Report/Conference proceedingAbstractAcademic

Genetic variation in macro- and micro-environmental sensitivity for milk yield in Swedish Holsteins

Mulder, H. A., Ronnegard, L., Wijga, S., Fikse, W. F., Veerkamp, R. F. & Strandberg, E., 2013, Book of Abstracts of the 64th Annual Meeting of the European Federation of Animal Science, 26-30 August 2013, Nantes, France. Wageningen: Wageningen Academic Publishers, Vol. 19. p. 215

Research output: Chapter in Book/Report/Conference proceedingAbstractAcademic

Recent innovations and tools of molecular genetics applied to animal breeding for the improvement of animal productions

te Pas, M. F. W., Smits, M. A., Veerkamp, R. F., Calus, M. P. L., Hulsegge, B., Hiemstra, S. J., Boer, M. & Windig, J. J., 2013, Proceedings of the 20th Congress of Animal Science and Production Association, 11-13 June 2013, Bologna, Italy. Vol. 12. p. C-001-C-001

Research output: Chapter in Book/Report/Conference proceedingAbstractAcademic

animal breeding
animal production
molecular genetics
livestock
livestock production