Robert Koetsier

Robert Koetsier, MSc

 https://orcid.org/0000-0002-4477-5401

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    • antiSMASH 8.0: extended gene cluster detection capabilities and analyses of chemistry, enzymology, and regulation

      Blin, K., Shaw, S., Vader, L., Szenei, J., Reitz, Z. L., Augustijn, H. E., Cediel-Becerra, J. D. D., de Crecy-Lagard, V., Koetsier, R. A., Williams, S. E., Cruz-Morales, P., Wongwas, S., Segurado Luchsinger, A., Biermann, F., Korenskaia, A., Zdouc, M. M., Meijer, D., Terlouw, B. R., van der Hooft, J. J. J. & Ziemert, N. & 7 others, Helfrich, E. J. N., Masschelein, J., Corre, C., Chevrette, M. G., van Wezel, G. P., Medema, M. H. & Weber, T., 2025, In: Nucleic acids research. 53, W1, p. W32-W38 7 p., gkaf334.

      Research output: Contribution to journal › Article › Academic › peer-review

      Open Access
      82 Citations (Scopus)

    • Effective data visualization strategies in untargeted metabolomics

      Mildau, K., Ehlers, H., Meisenburg, M., Del Pup, E., Koetsier, R. A., Torres Ortega, L. R., de Jonge, N. F., Singh, K. S., Ferreira, D., Othibeng, K., Tugizimana, F., Huber, F. & van der Hooft, J. J. J., 1 Jun 2025, In: Natural Product Reports. 42, 6, p. 982-1019 38 p.

      Research output: Contribution to journal › Literature review › peer-review

      Open Access
      10 Citations (Scopus)

    • MIBiG 4.0: advancing biosynthetic gene cluster curation through global collaboration

      Zdouc, M. M., Blin, K., Louwen, N. L. L., Navarro, J., Loureiro, C., Bader, C. D., Bailey, C. B., Barra, L., Booth, T. J., Bozhüyük, K. A. J., Cediel-Becerra, J. D. D., Charlop-Powers, Z., Chevrette, M. G., Chooi, Y. H., D’Agostino, P. M., de Rond, T., Pup, E. D., Duncan, K. R., Gu, W. & Hanif, N. & 268 others, Helfrich, E., Jenner, M., Katsuyama, Y., Korenskaia, A., Krug, D., Libis, V., Lund, G. A., Mantri, S., Morgan, K. D., Owen, C., Phan, C. S., Philmus, B., Reitz, Z., Robinson, S. L., Singh, K. S., Teufel, R., Tong, Y., Tugizimana, F., Ulanova, D., Winter, J., Aguilar, C., Akiyama, D. Y., Al-Salihi, S., Alanjary, M., Alberti, F., Aleti, G., Alharthi, S. A., Arias Rojo, M. Y., Arishi, A., Augustijn, H. E., Avalon, N. E., Avelar-Rivas, A., Axt, K. K., Barbieri, H. B., Barbosa, J. C. J., Segato, L. G. B., Barrett, S. E., Baunach, M., Beemelmanns, C., Beqaj, D., Berger, T., Bernaldo-Agüero, J., Bettenbühl, S. M., Bielinski, V. A., Biermann, F., Borges, R. M., Borriss, R., Breitenbach, M., Bretscher, K. M., Brigham, M. W., Buedenbender, L., Bulcock, B. W., Cano-Prieto, C., Capela, J., Carrion, V. J., Carter, R. S., Castelo-Branco, R., Castro-Falcón, G., Chagas, F. O., Charria-Girón, E., Chaudhri, A. A., Chaudhry, V., Choi, H., Choi, Y., Choupannejad, R., Chromy, J., Chue Donahey, M. S., Collemare, J., Connolly, J. A., Creamer, K. E., Crüsemann, M., Cruz, A. A., Cumsille, A., Dallery, J. F., Damas-Ramos, L. C., Damiani, T., de Kruijff, M., Martín, B. D., Sala, G. D., Dillen, J., Doering, D. T., Dommaraju, S. R., Durusu, S., Egbert, S., Ellerhorst, M., Faussurier, B., Fetter, A., Feuermann, M., Fewer, D. P., Foldi, J., Frediansyah, A., Garza, E. A., Gavriilidou, A., Gentile, A., Gerke, J., Gerstmans, H., Gomez-Escribano, J. P., González-Salazar, L. A., Grayson, N. E., Greco, C., Gris Gomez, J. E., Guerra, S., Flores, S. G., Gurevich, A., Gutiérrez-García, K., Hart, L., Haslinger, K., He, B., Hebra, T., Hemmann, J. L., Hindra, H., Höing, L., Holland, D. C., Holme, J. E., Horch, T., Hrab, P., Hu, J., Huynh, T. H., Hwang, J. Y., Iacovelli, R., Iftime, D., Iorio, M., Jayachandran, S., Jeong, E., Jing, J., Jung, J. J., Kakumu, Y., Kalkreuter, E., Kang, K. B., Kang, S., Kim, W., Kim, G. J., Kim, H., Kim, H. U., Klapper, M., Koetsier, R. A., Kollten, C., Kovács, Á. T., Kriukova, Y., Kubach, N., Kunjapur, A. M., Kushnareva, A. K., Kust, A., Lamber, J., Larralde, M., Larsen, N. J., Launay, A. P., Le, N. T. H., Lebeer, S., Lee, B. T., Lee, K., Lev, K. L., Li, S. M., Li, Y. X., Licona-Cassani, C., Lien, A., Liu, J., Lopez, J. A. V., Machushynets, N. V., Macias, M. I., Mahmud, T., Maleckis, M., Martinez-Martinez, A. M., Mast, Y., Maximo, M. F., McBride, C. M., McLellan, R. M., Bhatt, K. M., Melkonian, C., Merrild, A., Metsä-Ketelä, M., Mitchell, D. A., Müller, A. V., Nguyen, G. S., Nguyen, H. T., Niedermeyer, T. H. J., O’Hare, J. H., Ossowicki, A., Ostash, B. O., Otani, H., Padva, L., Paliyal, S., Pan, X., Panghal, M., Parade, D. S., Park, J., Parra, J., Rubio, M. P., Pham, H. T., Pidot, S. J., Piel, J., Pourmohsenin, B., Rakhmanov, M., Ramesh, S., Rasmussen, M. H., Rego, A., Reher, R., Rice, A. J., Rigolet, A., Romero-Otero, A., Rosas-Becerra, L. R., Rosiles, P. Y., Rutz, A., Ryu, B., Sahadeo, L. A., Saldanha, M., Salvi, L., Sánchez-Carvajal, E., Santos-Medellin, C., Sbaraini, N., Schoellhorn, S. M., Schumm, C., Sehnal, L., Selem, N., Shah, A. D., Shishido, T. K., Sieber, S., Silviani, V., Singh, G., Singh, H., Sokolova, N., Sonnenschein, E. C., Sosio, M., Sowa, S. T., Steffen, K., Stegmann, E., Streiff, A. B., Strüder, A., Surup, F., Svenningsen, T., Sweeney, D., Szenei, J., Tagirdzhanov, A., Tan, B., Tarnowski, M. J., Terlouw, B. R., Rey, T., Thome, N. U., Ortega, L. R. T., Tørring, T., Trindade, M., Truman, A. W., Tvilum, M., Udwary, D. W., Ulbricht, C., Vader, L., van Wezel, G. P., Walmsley, M., Warnasinghe, R., Weddeling, H. G., Weir, A. N. M., Williams, K., Williams, S. E., Witte, T. E., Wood Rocca, S. M., Yamada, K., Yang, D., Yang, D., Yu, J., Zhou, Z., Ziemert, N., Zimmer, L., Zimmermann, A., Zimmermann, C., van der Hooft, J. J. J., Linington, R. G., Weber, T. & Medema, M. H., 6 Jan 2025, In: Nucleic acids research. 53, D1, 13 p.

      Research output: Contribution to journal › Article › Academic › peer-review

      Open Access
      70 Citations (Scopus)

    • R script to automatically visualize annotations of molecular networks in CytoScape

      Koetsier, R. A., Mildau, K. A. (Contributor) & van der Hooft, J. J. J. (Contributor), 17 Jul 2024

      Research output: Non-textual form › Software

      Open Access

    • The Minimum Information about a Biosynthetic Gene Cluster (MIBiG) data repository

      Zdouc, M. M. (Creator), Blin, K. (Creator), Louwen, N. L. L. (Creator), Navarro, J. (Creator), Loureiro, C. (Creator), Bader, C. D. (Creator), Bailey, C. B. (Creator), Barra, L. (Creator), Booth, T. J. (Creator), Bozhüyük, K. A. J. (Creator), Cediel-Becerra, J. D. D. (Creator), Charlop-Powers, Z. (Creator), Chevrette, M. G. (Creator), Chooi, Y. H. (Creator), D’Agostino, P. M. (Creator), de Rond, T. (Creator), Pup, E. D. (Creator), Duncan, K. R. (Creator), Gu, W. (Creator), Hanif, N. (Creator), Helfrich, E. (Creator), Jenner, M. (Creator), Katsuyama, Y. (Creator), Korenskaia, A. (Creator), Krug, D. (Creator), Libis, V. (Creator), Lund, G. A. (Creator), Mantri, S. (Creator), Morgan, K. D. (Creator), Owen, C. (Creator), Phan, C. S. (Creator), Philmus, B. (Creator), Reitz, Z. (Creator), Robinson, S. L. (Creator), Singh, K. S. (Creator), Teufel, R. (Creator), Tong, Y. (Creator), Tugizimana, F. (Creator), Ulanova, D. (Creator), Winter, J. (Creator), Aguilar, C. (Creator), Akiyama, D. Y. (Creator), Al-Salihi, S. (Creator), Alanjary, M. (Creator), Alberti, F. (Creator), Aleti, G. (Creator), Alharthi, S. A. (Creator), Arias Rojo, M. Y. (Creator), Arishi, A. (Creator), Augustijn, H. E. (Creator), Avalon, N. E. (Creator), Avelar-Rivas, A. (Creator), Axt, K. K. (Creator), Barbieri, H. B. (Creator), Barbosa, J. C. J. (Creator), Segato, L. G. B. (Creator), Barrett, S. E. (Creator), Baunach, M. (Creator), Beemelmanns, C. (Creator), Beqaj, D. (Creator), Berger, T. (Creator), Bernaldo-Agüero, J. (Creator), Bettenbühl, S. M. (Creator), Bielinski, V. A. (Creator), Biermann, F. (Creator), Borges, R. M. (Creator), Borriss, R. (Creator), Breitenbach, M. (Creator), Bretscher, K. M. (Creator), Brigham, M. W. (Creator), Buedenbender, L. (Creator), Bulcock, B. W. (Creator), Cano-Prieto, C. (Creator), Capela, J. (Creator), Carrion, V. J. (Creator), Carter, R. S. (Creator), Castelo-Branco, R. (Creator), Castro-Falcón, G. (Creator), Chagas, F. O. (Creator), Charria-Girón, E. (Creator), Chaudhri, A. A. (Creator), Chaudhry, V. (Creator), Choi, H. (Creator), Choi, Y. (Creator), Choupannejad, R. (Creator), Chromy, J. (Creator), Chue Donahey, M. S. (Creator), Collemare, J. (Creator), Connolly, J. A. (Creator), Creamer, K. E. (Creator), Crüsemann, M. (Creator), Cruz, A. A. (Creator), Cumsille, A. (Creator), Dallery, J. F. (Creator), Damas-Ramos, L. C. (Creator), Damiani, T. (Creator), de Kruijff, M. (Creator), Martín, B. D. (Creator), Sala, G. D. (Creator), Dillen, J. (Creator), Doering, D. T. (Creator), Dommaraju, S. R. (Creator), Durusu, S. (Creator), Egbert, S. (Creator), Ellerhorst, M. (Creator), Faussurier, B. (Creator), Fetter, A. (Creator), Feuermann, M. (Creator), Fewer, D. P. (Creator), Foldi, J. (Creator), Frediansyah, A. (Creator), Garza, E. A. (Creator), Gavriilidou, A. (Creator), Gentile, A. (Creator), Gerke, J. (Creator), Gerstmans, H. (Creator), Gomez-Escribano, J. P. (Creator), González-Salazar, L. A. (Creator), Grayson, N. E. (Creator), Greco, C. (Creator), Gris Gomez, J. E. (Creator), Guerra, S. (Creator), Flores, S. G. (Creator), Gurevich, A. (Creator), Gutiérrez-García, K. (Creator), Hart, L. (Creator), Haslinger, K. (Creator), He, B. (Creator), Hebra, T. (Creator), Hemmann, J. L. (Creator), Hindra, H. (Creator), Höing, L. (Creator), Holland, D. C. (Creator), Holme, J. E. (Creator), Horch, T. (Creator), Hrab, P. (Creator), Hu, J. (Creator), Huynh, T. H. (Creator), Hwang, J. Y. (Creator), Iacovelli, R. (Creator), Iftime, D. (Creator), Iorio, M. (Creator), Jayachandran, S. (Creator), Jeong, E. (Creator), Jing, J. (Creator), Jung, J. J. (Creator), Kakumu, Y. (Creator), Kalkreuter, E. (Creator), Kang, K. B. (Creator), Kang, S. (Creator), Kim, W. (Creator), Kim, G. J. (Creator), Kim, H. (Creator), Kim, H. U. (Creator), Klapper, M. (Creator), Koetsier, R. A. (Creator), Kollten, C. (Creator), Kovács, Á. T. (Creator), Kriukova, Y. (Creator), Kubach, N. (Creator), Kunjapur, A. M. (Creator), Kushnareva, A. K. (Creator), Kust, A. (Creator), Lamber, J. (Creator), Larralde, M. (Creator), Larsen, N. J. (Creator), Launay, A. P. (Creator), Le, N. T. H. (Creator), Lebeer, S. (Creator), Lee, B. T. (Creator), Lee, K. (Creator), Lev, K. L. (Creator), Li, S. M. (Creator), Li, Y. X. (Creator), Licona-Cassani, C. (Creator), Lien, A. (Creator), Liu, J. (Creator), Lopez, J. A. V. (Creator), Machushynets, N. V. (Creator), Macias, M. I. (Creator), Mahmud, T. (Creator), Maleckis, M. (Creator), Martinez-Martinez, A. M. (Creator), Mast, Y. (Creator), Maximo, M. F. (Creator), McBride, C. M. (Creator), McLellan, R. M. (Creator), Bhatt, K. M. (Creator), Melkonian, C. (Creator), Merrild, A. (Creator), Metsä-Ketelä, M. (Creator), Mitchell, D. A. (Creator), Müller, A. V. (Creator), Nguyen, G. S. (Creator), Nguyen, H. T. (Creator), Niedermeyer, T. H. J. (Creator), O’Hare, J. H. (Creator), Ossowicki, A. (Creator), Ostash, B. O. (Creator), Otani, H. (Creator), Padva, L. (Creator), Paliyal, S. (Creator), Pan, X. (Creator), Panghal, M. (Creator), Parade, D. S. (Creator), Park, J. (Creator), Parra, J. (Creator), Rubio, M. P. (Creator), Pham, H. T. (Creator), Pidot, S. J. (Creator), Piel, J. (Creator), Pourmohsenin, B. (Creator), Rakhmanov, M. (Creator), Ramesh, S. (Creator), Rasmussen, M. H. (Creator), Rego, A. (Creator), Reher, R. (Creator), Rice, A. J. (Creator), Rigolet, A. (Creator), Romero-Otero, A. (Creator), Rosas-Becerra, L. R. (Creator), Rosiles, P. Y. (Creator), Rutz, A. (Creator), Ryu, B. (Creator), Sahadeo, L. A. (Creator), Saldanha, M. (Creator), Salvi, L. (Creator), Sánchez-Carvajal, E. (Creator), Santos-Medellin, C. (Creator), Sbaraini, N. (Creator), Schoellhorn, S. M. (Creator), Schumm, C. (Creator), Sehnal, L. (Creator), Selem, N. (Creator), Shah, A. D. (Creator), Shishido, T. K. (Creator), Sieber, S. (Creator), Silviani, V. (Creator), Singh, G. (Creator), Singh, H. (Creator), Sokolova, N. (Creator), Sonnenschein, E. C. (Creator), Sosio, M. (Creator), Sowa, S. T. (Creator), Steffen, K. (Creator), Stegmann, E. (Creator), Streiff, A. B. (Creator), Strüder, A. (Creator), Surup, F. (Creator), Svenningsen, T. (Creator), Sweeney, D. (Creator), Szenei, J. (Creator), Tagirdzhanov, A. (Creator), Tan, B. (Creator), Tarnowski, M. J. (Creator), Terlouw, B. R. (Creator), Rey, T. (Creator), Thome, N. U. (Creator), Ortega, L. R. T. (Creator), Tørring, T. (Creator), Trindade, M. (Creator), Truman, A. W. (Creator), Tvilum, M. (Creator), Udwary, D. W. (Creator), Ulbricht, C. (Creator), Vader, L. (Creator), van Wezel, G. P. (Creator), Walmsley, M. (Creator), Warnasinghe, R. (Creator), Weddeling, H. G. (Creator), Weir, A. N. M. (Creator), Williams, K. (Creator), Williams, S. E. (Creator), Witte, T. E. (Creator), Wood Rocca, S. M. (Creator), Yamada, K. (Creator), Yang, D. (Creator), Yang, D. (Creator), Yu, J. (Creator), Zhou, Z. (Creator), Ziemert, N. (Creator), Zimmer, L. (Creator), Zimmermann, A. (Creator), Zimmermann, C. (Creator), van der Hooft, J. J. J. (Creator), Linington, R. G. (Creator), Weber, T. (Creator) & Medema, M. H. (Creator), Wageningen University & Research, 15 Nov 2024

      DOI: 10.5281/zenodo.13367755

      Dataset