Richard Crooijmans

Search results

• Parallel genetic origin of foot feathering in birds

  Bortoluzzi, C. (Creator), Megens, H. (Creator), Bosse, M. (Creator), Derks, M. (Creator), Dibbits, B. (Creator), Laport, K. (Creator), Weigend, S. (Creator), Groenen, M. A. M. (Creator) & Crooijmans, R. (Creator), Wageningen University, 14 Feb 2020

  https://www.ebi.ac.uk/ena/data/view/PRJEB36674

  Dataset

• Using genome-wide measures of coancestry to maintain diversity and fitness in endangered and domestic pig populations

  Bosse, M. (Creator), Megens, H. (Creator), Madsen, O. (Creator), Crooijmans, R. (Creator), Ryder, O. A. (Creator), Austerlitz, F. (Creator), Groenen, M. A. M. (Creator) & de Cara, M. A. R. (Creator), Wageningen University, 13 May 2015

  https://www.ebi.ac.uk/ena/data/view/PRJEB9326

  Dataset

• Population bottlenecks and deleterious variation in small populations

  Bortoluzzi, C. (Creator), Bosse, M. (Creator), Derks, M. (Creator), Crooijmans, R. (Creator), Groenen, M. A. M. (Creator) & Megens, H. (Creator), Wageningen University, 15 Sep 2019

  https://www.ebi.ac.uk/ena/data/view/PRJEB34245

  Dataset

• Replicated high-density genetic maps of two great tit populations reveal fine-scale genomic departures from sex-equal recombination rates

  van Oers, K. (Creator), Santure, A. W. (Creator), de Cauwer, I. (Creator), van Bers, N. E. M. (Creator), Crooijmans, R. (Creator), Sheldon, B. C. (Creator), Visser, M. (Creator), Slate, J. (Creator) & Groenen, M. A. M. (Creator), Wageningen UR, 24 Sep 2013

  DOI: 10.5061/dryad.j7260

  Dataset

• Data from: Untangling the hybrid nature of modern pig genomes: a mosaic derived from biogeographically distinct and highly divergent Sus scrofa populations

  Bosse, M. (Creator), Megens, H. (Creator), Madsen, O. (Creator), Frantz, L. A. F. (Creator), Paudel, Y. (Creator), Crooijmans, R. (Creator) & Groenen, M. A. M. (Creator), Wageningen UR, 3 Jun 2014

  DOI: 10.5061/dryad.33982

  Dataset

• Large scale variation in copy number in chicken breeds

  Crooijmans, R. (Creator), Fife, M. S. (Creator), Fitzgerald, T. (Creator), Strickland, S. (Creator), Cheng, H. H. (Creator), Kaiser, P. (Creator), Redon, R. (Creator) & Groenen, M. A. M. (Creator), Wageningen University, 21 Aug 2013

  https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE47623

  Dataset

• Data from: Admixture between released and wild game birds: a changing genetic landscape in European mallards (Anas platyrhynchos)

  Söderquist, P. (Creator), Elmberg, J. (Creator), Thulin, C. G. (Creator), Champagnon, J. (Creator), Guillemain, M. (Creator), Kreisinger, J. (Creator), Prins, H. (Creator), Crooijmans, R. (Creator) & Kraus, R. H. S. (Creator), 5 Dec 2017

  DOI: 10.5061/dryad.74gd7

  Dataset

• Data from: Genome-wide single nucleotide polymorphism (SNP) identification and characterization in a non-model organism, the African buffalo (Syncerus caffer), using next generation sequencing

  Smitz, N. (Creator), van Hooft, P. (Creator), Heller, R. (Creator), Cornélis, D. (Creator), Chardonnet, P. (Creator), Kraus, R. (Creator), Greyling, B. (Creator), Crooijmans, R. (Creator) & Michaux, J. (Creator), Wageningen University & Research, 26 Sep 2016

  DOI: 10.5061/dryad.q8q11

  Dataset

• A survey of gene expression in adult chicken tissues using a chicken 20K oligonucleotide microarray [Gallus gallus]

  van Schothorst, E. (Creator), Keijer, J. (Creator), Nie, H. (Creator), Crooijmans, R. (Creator), Lammers, A. (Creator), Leunissen, J. A. M. (Creator), Megens, H. (Creator) & Groenen, M. A. M. (Creator), Wageningen UR, 8 Mar 2010

  http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE17108

  Dataset

• Data from: Genome-wide single nucleotide polymorphism analysis reveals recent genetic introgression from domestic pigs into Northwest European wild boar populations

  Goedbloed, D. J. (Creator), Megens, H. (Creator), van Hooft, P. (Creator), Herrero-Medrano, J. (Creator), Lutz, W. (Creator), Alexandri, P. (Creator), Crooijmans, R. (Creator), Groenen, M. A. M. (Creator), van Wieren, S. (Creator), Ydenberg, R. C. (Creator) & Prins, H. (Creator), Wageningen UR, 14 May 2012

  DOI: 10.5061/dryad.v6f1g

  Dataset

• A Phylogenomic Perspective on the Evolutionary History of the True Geese

  Ottenburghs, J. (Creator), Megens, H. (Creator), Kraus, R. H. S. (Creator), van Hooft, P. (Creator), van Wieren, S. (Creator), Crooijmans, R. (Creator), Ydenberg, R. C. (Creator), Groenen, M. A. M. (Creator) & Prins, H. (Creator), Wageningen University, 9 Jun 2017

  https://www.ebi.ac.uk/ena/data/view/PRJEB20373

  Dataset

• Data from: Genomic diversity and differentiation of a managed island wild boar population

  Iacolina, L. (Creator), Scandura, M. (Creator), Goedbloed, D. J. (Creator), Alexandri, P. (Creator), Crooijmans, R. (Creator), Larson, G. (Creator), Archibald, A. L. (Creator), Apollonio, M. (Creator), Schook, L. B. (Creator), Groenen, M. A. M. (Creator) & Megens, H. (Creator), Wageningen University & Research, 2015

  DOI: 10.5061/dryad.8bf48

  Dataset

• Analyses of Eurasian wild and domestic pig genomes reveal long-term gene flow and selection during domestication

  Frantz, L. A. F. (Creator), Schraiber, J. G. (Creator), Madsen, O. (Creator), Megens, H. (Creator), Cagan, A. (Creator), Bosse, M. (Creator), Paudel, Y. (Creator), Crooijmans, R. (Creator), Larson, G. (Creator) & Groenen, M. A. M. (Creator), Wageningen University, 27 Aug 2015

  https://www.ebi.ac.uk/ena/data/view/PRJEB9922

  Dataset

• Data from: Distribution and functionality of copy number variation across European cattle populations

  Upadhyay, M. R. (Creator), Da Silva, V. (Creator), Megens, H. (Creator), Visker, M. H. P. W. (Creator), Ajmone-Marsan, P. (Creator), Bâlteanu, V. A. (Creator), Dunner, S. (Creator), Garcia, J. F. (Creator), Ginja, C. (Creator), Kantanen, J. (Creator), Groenen, M. A. M. (Creator) & Crooijmans, R. (Creator), Wageningen University & Research, 24 Aug 2017

  DOI: 10.5061/dryad.s57d6

  Dataset

• Data from: Distinguishing migration events of different timing for wild boar in the Balkans

  Alexandri, P. (Creator), Megens, H. (Creator), Crooijmans, R. (Creator), Groenen, M. A. M. (Creator), Goedbloed, D. J. (Creator), Herrero Medrano, J. M. (Creator), Rund, L. A. (Creator), Schook, L. B. (Creator), Chatzinikos, E. (Creator), Triantaphyllidis, C. (Creator) & Triantafyllidis, A. (Creator), Wageningen University & Research, 31 Oct 2016

  DOI: 10.5061/dryad.t722h

  Dataset

• Signatures of Diversifying Selection in European Pig Breeds

  Wilkinson, S. (Creator), Lu, Z. H. (Creator), Megens, H. (Creator), Archibald, A. L. (Creator), Haley, C. (Creator), Jackson, I. J. (Creator), Groenen, M. A. M. (Creator), Crooijmans, R. (Creator), Ogden, R. (Creator) & Wiener, P. (Creator), Wageningen UR, 2013

  DOI: 10.5061/dryad.c2124

  Dataset

• Autosomal dwarfism study in chicken

  Wu, Z. (Creator), Derks, M. (Creator), Dibbits, B. (Creator), Megens, H. (Creator), Groenen, M. A. M. (Creator) & Crooijmans, R. (Creator), Wageningen University & Research, 16 May 2018

  https://www.ebi.ac.uk/ena/data/view/PRJEB25937

  Dataset

• Data from: Porcine colonization of the Americas: a 60k SNP story

  Burgos-Paz, W. (Creator), Souza, C. (Creator), Megens, H. (Creator), Ramayo-Caldas, Y. (Creator), Crooijmans, R. (Creator) & Groenen, M. A. M. (Creator), 16 Nov 2012

  DOI: 10.5061/dryad.t1r3d

  Dataset

• Affymetrix SNP array data for wild Dutch great tits (Parus major)

  Da Silva, V. (Creator), Laine, V. N. (Creator), Bosse, M. (Creator), van Oers, K. (Creator), Dibbits, B. (Creator), Visser, M. (Creator), Crooijmans, R. (Creator) & Groenen, M. A. M. (Creator), NIOO-KNAW, 19 Feb 2018

  https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE105131

  Dataset

• Parus major Genome sequencing and assembly

  Laine, V. N. (Creator), Gossmann, T. I. (Creator), Schachtschneider, K. (Creator), Garroway, C. J. (Creator), Madsen, O. (Creator), Verhoeven, K. J. F. (Creator), De Jager, V. (Creator), Megens, H. (Creator), Warren, W. C. (Creator), Minx, P. (Creator), Crooijmans, R. (Creator), Corcoran, P. (Creator), Adriaensen, F. (Creator), Belda, E. (Creator), Bushuev, A. (Creator), Cichon, M. (Creator), Charmantier, A. (Creator), Dingemanse, N. (Creator), Doligez, B. (Creator), Eeva, T. (Creator), Erikstad, K. E. (Creator), Fedorov, S. (Creator), Hau, M. (Creator), Hille, S. (Creator), Hinde, C. (Creator), Kempenaers, B. (Creator), Kerimov, A. (Creator), Krist, M. (Creator), Mand, R. (Creator), Matthysen, E. (Creator), Nager, R. (Creator), Norte, C. (Creator), Orell, M. (Creator), Richner, H. (Creator), Slagsvold, T. (Creator), Tilgar, V. (Creator), Tinbergen, J. (Creator), Torok, J. (Creator), Tschirren, B. (Creator), Yuta, T. (Creator), Sheldon, B. C. (Creator), Slate, J. (Creator), Zeng, K. (Creator), van Oers, K. (Creator), Visser, M. (Creator) & Groenen, M. A. M. (Creator), Wageningen University, 17 Jun 2013

  https://www.ebi.ac.uk/ena/data/view/PRJNA208335

  Dataset

• Data from: Artificial selection on introduced Asian haplotypes shaped the genetic architecture in European commercial pigs

  Bosse, M. (Creator), Soares Lopes, M. (Creator), Madsen, O. (Creator), Megens, H. (Creator), Crooijmans, R. (Creator), Frantz, L. (Creator), Harlizius, B. (Creator), Bastiaansen, J. (Creator) & Groenen, M. A. M. (Creator), Wageningen University & Research, 2 Dec 2015

  DOI: 10.5061/dryad.g40f0

  Dataset

• Transcriptome profiling of porcine jejunum tissue, its derived organoids over long-term culture, and transformed cell line IPECJ2 as reference model

  van der Hee, B. (Creator), Crooijmans, R. (Creator), Taverne, N. (Creator), Choudhury, R. (Creator), Loonen-Jaklofsky, L. (Creator), Madsen, O. (Creator), Smidt, H. (Creator) & Wells, J. (Creator), Wageningen University, 13 Mar 2020

  https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE146408

  Dataset

• Wageningen University Porcine re-sequencing Phase 1

  Groenen, M. A. M. (Creator), Megens, H. (Creator), Frantz, L. A. F. (Creator), Bosse, M. (Creator), Crooijmans, R. (Creator), Dibbits, B. (Creator), Madsen, O. (Creator) & Paudel, Y. (Creator), Wageningen University, 10 Oct 2012

  http://www.ebi.ac.uk/ena/data/view/PRJEB1683

  Dataset

• A new chicken 55K SNP genotyping array

  Liu, R. (Creator), Xing, S. (Creator), Wang, J. (Creator), Zheng, M. (Creator), Cui, H. (Creator), Crooijmans, R. (Creator), Li, Q. (Creator), Zhao, G. (Creator) & Wen, J. (Creator), Wageningen University and Research, 22 Mar 2019

  DOI: 10.6084/m9.figshare.c.4514534

  Dataset

• Genomic relatedness and diversity of Swedish native cattle breeds

  Upadhyay, M. (Creator), Eriksson, S. (Creator), Mikko, S. (Creator), Strandberg, E. (Creator), Stålhammar, H. (Creator), Groenen, M. A. M. (Creator), Crooijmans, R. (Creator), Andersson, G. (Creator) & Johansson, A. M. (Creator), Swedish University of Agricultural Sciences, SLU, 23 Sep 2019

  DOI: 10.5061/dryad.wdbrv15j4

  Dataset