Richard Crooijmans

Search results

• Data from: Genome-wide single nucleotide polymorphism (SNP) identification and characterization in a non-model organism, the African buffalo (Syncerus caffer), using next generation sequencing

  Smitz, N. (Creator), van Hooft, W. F. (Creator), Heller, R. (Creator), Cornélis, D. (Creator), Chardonnet, P. (Creator), Kraus, R. (Creator), Greyling, B. (Creator), Crooijmans, R. P. M. A. (Creator) & Michaux, J. (Creator), Wageningen University & Research, 26 Sept 2016

  DOI: 10.5061/dryad.q8q11

  Dataset

• Large scale variation in copy number in chicken breeds

  Crooijmans, R. (Creator), Fife, M. S. (Creator), Fitzgerald, T. (Creator), Strickland, S. (Creator), Cheng, H. H. (Creator), Kaiser, P. (Creator), Redon, R. (Creator) & Groenen, M. (Creator), Wageningen University, 21 Aug 2013

  https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE47623

  Dataset

• Gallus gallus D-loop, partial sequence; mitochondrial

  Mullu, N. D. (Creator), Megens, H. J. W. C. (Creator), Crooijmans, R. P. M. A. (Creator), Hanotte, O. (Creator), Mwacharo, J. (Creator), Groenen, M. A. M. (Creator) & van Arendonk, J. A. M. (Creator), Wageningen University & Research, 14 Mar 2011

  https://www.ncbi.nlm.nih.gov/popset/295917202

  Dataset

• Using genome-wide measures of coancestry to maintain diversity and fitness in endangered and domestic pig populations

  Bosse, M. (Creator), Megens, H. J. W. C. (Creator), Madsen, O. (Creator), Crooijmans, R. P. M. A. (Creator), Ryder, O. A. (Creator), Austerlitz, F. (Creator), Groenen, M. (Creator) & de Cara, M. A. R. (Creator), Wageningen University, 13 May 2015

  https://www.ebi.ac.uk/ena/data/view/PRJEB9326

  Dataset

• Data from: Distinguishing migration events of different timing for wild boar in the Balkans

  Alexandri, P. (Creator), Megens, H. J. W. C. (Creator), Crooijmans, R. P. M. A. (Creator), Groenen, M. (Creator), Goedbloed, D. J. (Creator), Herrero Medrano, J. M. (Creator), Rund, L. A. (Creator), Schook, L. B. (Creator), Chatzinikos, E. (Creator), Triantaphyllidis, C. (Creator) & Triantafyllidis, A. (Creator), Wageningen University & Research, 31 Oct 2016

  DOI: 10.5061/dryad.t722h

  Dataset

• Data from: Genomic diversity and differentiation of a managed island wild boar population

  Iacolina, L. (Creator), Scandura, M. (Creator), Goedbloed, D. J. (Creator), Alexandri, P. (Creator), Crooijmans, R. P. M. A. (Creator), Larson, G. (Creator), Archibald, A. L. (Creator), Apollonio, M. (Creator), Schook, L. B. (Creator), Groenen, M. (Creator) & Megens, H. J. W. C. (Creator), Wageningen University & Research, 2015

  DOI: 10.5061/dryad.8bf48

  Dataset

• A Phylogenomic Perspective on the Evolutionary History of the True Geese

  Ottenburghs, J. (Creator), Megens, H. J. W. C. (Creator), Kraus, R. H. S. (Creator), van Hooft, W. F. (Creator), van Wieren, S. E. (Creator), Crooijmans, R. P. M. A. (Creator), Ydenberg, R. C. (Creator), Groenen, M. (Creator) & Prins, H. H. T. (Creator), Wageningen University, 9 Jun 2017

  https://www.ebi.ac.uk/ena/data/view/PRJEB20373

  Dataset

• QTL mapping and selection signatures in Groningen White Headed cattle (Optibov Project)

  Gonzalez-Prendes, R. (Creator), Ginja, C. (Creator), Kantanen, J. (Creator), Ghanem, N. (Creator), Kugonza, D. R. (Creator), Makgahlela, M. L. (Creator), Groenen, M. A. M. (Creator) & Crooijmans, R. P. M. A. (Creator), Wageningen University & Research, 27 Oct 2022

  https://www.ebi.ac.uk/ena/browser/view/PRJEB56301

  Dataset

• Data from: Genetic diversity of Nile tilapia (Oreochromis niloticus) throughout West Africa

  Lind, C. E. (Creator), Agyakwah, S. K. (Creator), Attipoe, F. Y. (Creator), Nugent, C. (Creator), Crooijmans, R. (Creator) & Toguyeni, A. (Creator), Commonwealth Scientific and Industrial Research Organization (CSIRO), 16 Nov 2019

  DOI: 10.5061/dryad.bk3j9kd6m

  Dataset

• Landscape genomics reveals regions associated with adaptive phenotypic and genetic variation in Ethiopian indigenous chickens

  Kebede, F. (Creator), Derks, M. (Creator), Dessie, T. (Creator), Hanotte, O. (Creator), Moitinho de Almeida Pita Barros, C. (Creator), Crooijmans, R. (Creator), Komen, H. (Creator) & Bastiaansen, J. (Creator), Springer, 11 Sept 2024

  DOI: 10.6084/m9.figshare.c.7127887

  Dataset

• Adaptive phenotypic and genetic variation in chickens: a landscape genomics approach

  Kebede, F. (Creator), Derks, M. (Creator), Dessie, T. (Creator), Hanotte, O. (Creator), Moitinho de Almeida Pita Barros, C. (Creator), Crooijmans, R. (Creator), Komen, H. (Creator) & Bastiaansen, J. (Creator), Wageningen University & Research, 26 May 2022

  DOI: 10.5281/zenodo.6583345

  Dataset

• Data from: Genome-wide SNP data unveils the globalization of domesticated pigs

  Yang, B. (Creator), Cui, L. (Creator), Pérez-Enciso, M. (Creator), Traspov, A. (Creator), Crooijmans, R. P. M. A. (Creator), Zinovieva, N. (Creator), Schook, L. B. (Creator), Gatphayak, K. (Creator), Knorr, C. (Creator), Triantafyllidis, A. (Creator), Alexandri, P. (Creator), Semiadi, G. (Creator), Hanotte, O. (Creator), Dias, D. (Creator), Dovč, P. (Creator), Uimari, P. (Creator), Iacolina, L. (Creator), Scandura, M. (Creator), Groenen, M. (Creator), Huang, L. (Creator) & Megens, H. J. W. C. (Creator), National Key Laboratory for Pig Genetic Improvement and Production Technology, 25 Sept 2017

  DOI: 10.5061/dryad.30tk6

  Dataset

• Reduced Representation Bisulfite Sequencing of hearts of Cobb Broiler chicks collected at 6hr post-hatch and incubated at different egg shell temperatures and CO2 concentrations

  Corbett, R. (Creator), te Pas, M. (Creator), van den Brand, H. (Creator), Groenen, M. A. M. (Creator), Crooijmans, R. (Creator), Ernst, C. W. (Creator) & Madsen, O. (Creator), Wageningen University & Research, 25 Sept 2020

  https://www.ebi.ac.uk/ena/browser/view/PRJEB39999

  Dataset

• Deleterious Mutations in the TPO Gene Associated with Familial Thyroid Follicular Cell Carcinoma in Dutch German Longhaired Pointers

  Yu, Y. (Creator), Bovenhuis, H. (Creator), Wu, Z. (Creator), Laport, K. (Creator), Groenen, M. A. M. (Creator) & Crooijmans, R. (Creator), Wageningen University, 29 Jun 2021

  https://www.ebi.ac.uk/ena/browser/view/PRJEB43017

  Dataset

• Gallus gallus breed:Silkie Genome sequencing and assembly

  Smith, J. (Creator), Alfieri, J. M. (Creator), Anthony, N. (Creator), Arensburger, P. (Creator), Athrey, G. N. (Creator), Balacco, J. (Creator), Balic, A. (Creator), Bardou, P. (Creator), Barela, P. (Creator), Bigot, Y. (Creator), Blackmon, H. (Creator), Borodin, P. M. (Creator), Carroll, R. (Creator), Casono, M. C. (Creator), Charles, M. (Creator), Cheng, H. (Creator), Chiodi, M. (Creator), Cigan, L. (Creator), Coghill, L. M. (Creator), Crooijmans, R. (Creator), Das, N. (Creator), Davey, S. (Creator), Davidian, A. (Creator), Degalez, F. (Creator), Dekkers, J. M. (Creator), Derks, M. (Creator), Diack, A. B. (Creator), Djikeng, A. (Creator), Drechsler, Y. (Creator), Dyomin, A. (Creator), Fedrigo, O. (Creator), Fiddaman, S. R. (Creator), Formenti, G. (Creator), Frantz, L. A. F. (Creator), Fulton, J. E. (Creator), Gaginskaya, E. (Creator), Galkina, S. (Creator), Gallardo, R. A. (Creator), Geibel, J. (Creator), Gheyas, A. A. (Creator), Godinez, C. J. P. (Creator), Goodell, A. (Creator), Graves, J. A. M. (Creator), Griffin, D. K. (Creator), Haase, B. (Creator), Han, J. L. (Creator), Hanotte, O. (Creator), Henderson, L. J. (Creator), Hou, Z. C. (Creator), Howe, K. (Creator), Huynh, L. (Creator), Ilatsia, E. (Creator), Jarvis, E. D. (Creator), Johnson, S. M. (Creator), Kaufman, J. (Creator), Kelly, T. (Creator), Kemp, S. (Creator), Kern, C. (Creator), Keroack, J. H. (Creator), Klopp, C. (Creator), Lagarrigue, S. (Creator), Lamont, S. J. (Creator), Lange, M. (Creator), Lanke, A. (Creator), Larkin, D. M. (Creator), Larson, G. (Creator), Layos, J. K. N. (Creator), Lebrasseur, O. (Creator), Malinovskaya, L. P. (Creator), Martin, R. J. (Creator), Cerezo, M. L. M. (Creator), Mason, A. S. (Creator), McCarthy, F. M. (Creator), McGrew, M. J. (Creator), Mountcastle, J. (Creator), Muhonja, C. K. (Creator), Muir, W. (Creator), Muret, K. (Creator), Murphy, T. D. (Creator), Ng'ang'a, I. (Creator), Nishibori, M. (Creator), O'Connor, R. E. (Creator), Ogugo, M. (Creator), Okimoto, R. (Creator), Ouko, O. (Creator), Patel, H. R. (Creator), Perini, F. (Creator), Pigozzi, M. I. (Creator), Potter, K. C. (Creator), Price, P. D. (Creator), Reimer, C. (Creator), Rice, E. S. (Creator), Rocos, N. (Creator), Rogers, T. F. (Creator), Saelao, P. (Creator), Schauer, J. (Creator), Schnabel, R. D. (Creator), Schneider, V. A. (Creator), Simianer, H. (Creator), Smith, A. (Creator), Stevens, M. P. (Creator), Stiers, K. (Creator), Tiambo, C. K. (Creator), Tixier-Boichard, M. (Creator), Torgasheva, A. A. (Creator), Tracey, A. (Creator), Tregaskes, C. A. (Creator), Vervelde, L. (Creator), Wang, Y. (Creator), Warren, W. C. (Creator), Waters, P. D. (Creator), Webb, D. (Creator), Weigend, S. (Creator), Wolc, A. (Creator), Wright, A. E. (Creator), Wright, D. (Creator), Wu, Z. (Creator), Yamagata, M. (Creator), Yang, C. (Creator), Yin, Z. T. (Creator), Young, M. C. (Creator), Zhang, G. (Creator), Zhao, B. (Creator) & Zhou, H. (Creator), China Agricultural University, 27 Oct 2023

  https://www.ncbi.nlm.nih.gov/bioproject/805080

  Dataset

• FAANG Pig IPECJ2 cell line

  de Vos, J. (Creator), Crooijmans, R. P. M. A. (Creator), Derks, M. F. L. (Creator), Kloet, S. L. (Creator), Dibbits, B. (Creator), Groenen, M. A. M. (Creator) & Madsen, O. (Creator), Wageningen University & Research, 28 Feb 2023

  https://www.ebi.ac.uk/ena/browser/view/PRJEB59474

  Dataset

• A new chicken 55K SNP genotyping array

  Liu, R. (Creator), Xing, S. (Creator), Wang, J. (Creator), Zheng, M. (Creator), Cui, H. (Creator), Crooijmans, R. (Creator), Li, Q. (Creator), Zhao, G. (Creator) & Wen, J. (Creator), Wageningen University & Research, 22 Mar 2019

  DOI: 10.6084/m9.figshare.c.4514534

  Dataset

• Data from: Porcine colonization of the Americas: a 60k SNP story

  Burgos-Paz, W. (Creator), Souza, C. (Creator), Megens, H.-J. (Creator), Ramayo-Caldas, Y. (Creator), Crooijmans, R. (Creator) & Groenen, M. (Creator), Autonomous University of Barcelona, 16 Nov 2012

  DOI: 10.5061/dryad.t1r3d

  Dataset

• Data from: Admixture between released and wild game birds: a changing genetic landscape in European mallards (Anas platyrhynchos)

  Söderquist, P. (Creator), Elmberg, J. (Creator), Thulin, C. G. (Creator), Champagnon, J. (Creator), Guillemain, M. (Creator), Kreisinger, J. (Creator), Prins, H. H. T. (Creator), Crooijmans, R. P. M. A. (Creator) & Kraus, R. H. S. (Creator), Kristianstad University, 5 Dec 2017

  DOI: 10.5061/dryad.74gd7

  Dataset

• Sus scrofa control region, partial sequence; mitochondrial

  Goedbloed, D. J. (Creator), Megens, H. J. W. C. (Creator), van Hooft, W. F. (Creator), Herrero-Medrano, J. (Creator), Lutz, W. (Creator), Alexandri, P. (Creator), Crooijmans, R. P. M. A. (Creator), Groenen, M. A. M. (Creator), van Wieren, S. E. (Creator), Ydenberg, R. C. (Creator) & Prins, H. H. T. (Creator), Wageningen University & Research, 22 Jan 2013

  https://www.ncbi.nlm.nih.gov/popset/394782071

  Dataset

• Sus cebifrons genome assembly

  Liu, L. (Creator), Megens, H.-J. (Creator), Crooijmans, R. (Creator) & Bosse, M. (Creator), Wageningen University and Research Centre, 28 Apr 2022

  Dataset

• Data from: Artificial selection on introduced Asian haplotypes shaped the genetic architecture in European commercial pigs

  Bosse, M. (Creator), Soares Lopes, M. (Creator), Madsen, O. (Creator), Megens, H.-J. (Creator), Crooijmans, R. (Creator), Frantz, L. (Creator), Harlizius, B. (Creator), Bastiaansen, J. (Creator) & Groenen, M. (Creator), Wageningen University & Research, 2 Dec 2015

  DOI: 10.5061/dryad.g40f0

  Dataset

• Population bottlenecks and deleterious variation in small populations

  Bortoluzzi, C. (Creator), Bosse, M. (Creator), Derks, M. (Creator), Crooijmans, R. (Creator), Groenen, M. (Creator) & Megens, H.-J. (Creator), Wageningen University, 15 Sept 2019

  https://www.ebi.ac.uk/ena/data/view/PRJEB34245

  Dataset

• Parus major Genome sequencing and assembly

  Laine, V. N. (Creator), Gossmann, T. I. (Creator), Schachtschneider, K. (Creator), Garroway, C. J. (Creator), Madsen, O. (Creator), Verhoeven, K. J. F. (Creator), De Jager, V. (Creator), Megens, H.-J. (Creator), Warren, W. C. (Creator), Minx, P. (Creator), Crooijmans, R. (Creator), Corcoran, P. (Creator), Adriaensen, F. (Creator), Belda, E. (Creator), Bushuev, A. (Creator), Cichon, M. (Creator), Charmantier, A. (Creator), Dingemanse, N. (Creator), Doligez, B. (Creator), Eeva, T. (Creator), Erikstad, K. E. (Creator), Fedorov, S. (Creator), Hau, M. (Creator), Hille, S. (Creator), Hinde, C. (Creator), Kempenaers, B. (Creator), Kerimov, A. (Creator), Krist, M. (Creator), Mand, R. (Creator), Matthysen, E. (Creator), Nager, R. (Creator), Norte, C. (Creator), Orell, M. (Creator), Richner, H. (Creator), Slagsvold, T. (Creator), Tilgar, V. (Creator), Tinbergen, J. (Creator), Torok, J. (Creator), Tschirren, B. (Creator), Yuta, T. (Creator), Sheldon, B. C. (Creator), Slate, J. (Creator), Zeng, K. (Creator), van Oers, K. (Creator), Visser, M. (Creator) & Groenen, M. (Creator), Wageningen University, 17 Jun 2013

  https://www.ebi.ac.uk/ena/data/view/PRJNA208335

  Dataset

• Whole Genome SNP Discovery and Analysis of Genetic Diversity in Turkey (Meleagris gallopavo)

  Aslam, M. L. (Creator), Bastiaansen, J. W. M. (Creator), Elferink, M. G. (Creator), Megens, H. J. W. C. (Creator), Crooijmans, R. P. M. A. (Creator), Blomberg, L. A. (Creator), Fleischer, R. C. (Creator), van Tassell, C. P. (Creator), Sonstegard, T. S. (Creator), Schroeder, S. G. (Creator), Groenen, M. (Creator) & Long, J. A. (Creator), Wageningen University, 4 Feb 2014

  https://www.ncbi.nlm.nih.gov//bioproject/PRJNA237339

  Dataset