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Research Output 1994 2019

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Article
2019

A genetical metabolomics approach for bioprospecting plant biosynthetic gene clusters

Witjes, L., Kooke, R., Van Der Hooft, J. J. J., De Vos, R. C. H., Keurentjes, J. J. B., Medema, M. H. & Nijveen, H., 2 Apr 2019, In : BMC Research Notes. 12, 1, 194.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Plant Genes
Metabolomics
Multigene Family
Genes
Metabolites
1 Citation (Scopus)

Association between vitamin content, plant morphology and geographical origin in a worldwide collection of the orphan crop Gynandropsis gynandra (Cleomaceae)

Sogbohossou, E. O. D., Kortekaas, D., Achigan-Dako, E. G., Maundu, P., Stoilova, T., Van Deynze, A., de Vos, C. H. & Schranz, M. E., Sep 2019, In : Planta. 250, 3, p. 933-947 15 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Cleomaceae
Gynandropsis gynandra
vitamin content
Tocopherols
plant morphology

Epigenetic mapping of the Arabidopsis metabolome reveals mediators of the epigenotype-phenotype map

Kooke, R., Morgado, L. N., Becker, F. F. M., van Eekelen, H. D. L. M., Hazarika, R., Zhang, Q., de Vos, C. H., Johannes, F. & Keurentjes, J. J. B., 2019, In : Genome Research. 29, 1, p. 96-106

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Metabolome
Arabidopsis
Epigenomics
Phenotype
RNA
4 Citations (Scopus)

Genetic variation in phytochemicals in leaves of pepper (Capsicum) in relation to thrips resistance

Maharijaya, A., Vosman, B., Pelgrom, K., Wahyuni, Y., de Vos, R. C. H. & Voorrips, R. E., Feb 2019, In : Arthropod-Plant Interactions. 13, 1, p. 1-9

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
thrips
Capsicum
sweet peppers
Thysanoptera
phytopharmaceuticals

Glucosinolate variability between turnip organs during development

Bonnema, G., Lee, J. G., Shuhang, W., Lagarrigue, D., Bucher, J., Wehrens, R., De Vos, R. & Beekwilder, J., 1 Jun 2019, In : PLoS ONE. 14, 6, e0217862.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Glucosinolates
Brassica napus
turnips
glucosinolates
tubers

Light-Induced Vitamin C Accumulation in Tomato Fruits is Independent of Carbohydrate Availability

Ntagkas, N., Woltering, E. J., Bouras, S., de Vos, C. H., Dieleman, J. A., Nicole, C., Labrie, C. W. & Marcelis, L. F. M., 3 Apr 2019, In : Plants. 8, 4, 86.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
ascorbic acid
tomatoes
carbohydrates
fruits
myo-inositol
1 Citation (Scopus)

Metabolomics of Thrips Resistance in Pepper (Capsicum spp.) Reveals Monomer and Dimer Acyclic Diterpene Glycosides as Potential Chemical Defenses

Macel, M., Visschers, I. S. G., Peters, J., Kappers, I. F., de Vos, C. H. & van Dam, N. M., Jun 2019, In : Journal of Chemical Ecology. 45, 5-6, p. 490-501 12 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Thysanoptera
Thrips (Thripidae)
Capsicum
thrips
Metabolomics

Pyrethric acid of natural pyrethrin insecticide: complete pathway elucidation and reconstitution in Nicotiana benthamiana

Xu, H., Li, W., Schilmiller, A. L., van Eekelen, H. D. L. M., de Vos, C. H., Jongsma, M. A. & Pichersky, E., Jul 2019, In : New Phytologist. 223, 2, p. 751-765

Research output: Contribution to journalArticleAcademicpeer-review

Pyrethrins
Nicotiana benthamiana
Insecticides
pyrethrins
Tobacco
1 Citation (Scopus)

QTL mapping of insect resistance components of Solanum galapagense

Vosman, B., Kashaninia, A., van’t Westende, W., Meijer-Dekens, F., van Eekelen, H., Visser, R. G. F., de Vos, R. C. H. & Voorrips, R. E., Feb 2019, In : Theoretical and Applied Genetics. 132, 2, p. 531–541

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Solanum galapagense
Trichomes
Solanum
trichomes
Insects

The effect of isolation methods of tomato pollen on the results of metabolic profiling

Paupière, M. J., Tikunov, Y. M., Firon, N., de Vos, R. C. H., Maliepaard, C., Visser, R. G. F. & Bovy, A. G., 1 Jan 2019, In : Metabolomics. 15, 1, 11.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Lycopersicon esculentum
Metabolites
Pollen
Metabolomics
Contamination
3 Citations (Scopus)

Translocation and de novo synthesis of eicosapentaenoic acid (EPA) during nitrogen starvation in Nannochloropsis gaditana

Janssen, J. H., Lamers, P. P., de Vos, C. H., Wijffels, R. H. & Barbosa, M. J., Jan 2019, In : Algal Research. 37, p. 138-144

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Nannochloropsis
eicosapentaenoic acid
starvation
triacylglycerols
synthesis
2018
8 Citations (Scopus)
Open Access
Solanum galapagense
Lycopersicon esculentum
Trichomes
Insects
Solanum
3 Citations (Scopus)

Health effects of feeding genetically modified (GM) crops to livestock animals: A review

de Vos, C. J. & Swanenburg, M., Jul 2018, In : Food and Chemical Toxicology. 117, p. 3-12

Research output: Contribution to journalArticleAcademicpeer-review

Livestock
Farms
Crops
Animals
glyphosate
1 Citation (Scopus)

Kauniolide synthase is a P450 with unusual hydroxylation and cyclization-elimination activity

Liu, Q., Beyraghdar Kashkooli, A., Manzano, D., Pateraki, I., Richard, L., Kolkman, P., Lucas, M. F., Guallar, V., de Vos, R. C. H., Franssen, M. C. R., van der Krol, A. & Bouwmeester, H., 7 Nov 2018, In : Nature Communications. 9, 1, 4657.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Tanacetum parthenium
Hydroxylation
biosynthesis
cytochromes
Cyclization
4 Citations (Scopus)

Metabolic responses of Eucalyptus species to different temperature regimes

Mokochinski, J. B., Mazzafera, P., Sawaya, A. C. H. F., Mumm, R., de Vos, R. C. H. & Hall, R. D., May 2018, In : Journal of Integrative Plant Biology. 60, 5, p. 397-411

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Eucalyptus
Temperature
Metabolomics
Liquid chromatography
metabolomics
2 Citations (Scopus)

Metabolite variation in the lettuce gene pool: towards healthier crop varieties and food

van Treuren, R., van Eekelen, H. D. L. M., Wehrens, R. & de Vos, R. C. H., 1 Nov 2018, In : Metabolomics. 14, 11, 146.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Gene Pool
Lettuce
Phytochemicals
Metabolites
Crops
5 Citations (Scopus)
Open Access
metabolome
Phaeodactylum tricornutum
Bacillariophyceae
proteome
transcriptome
2016
6 Citations (Scopus)

Arabidopsis myrosinases link the glucosinolate-myrosinase system and the cuticle

Ahuja, I., de Vos, R. C. H., Rohloff, J., Stoopen, G. M., Halle, K. K., Ahmad, S. J. N., Hoang, L., Hall, R. D. & Bones, A. M., 2016, In : Scientific Reports. 6, 38990.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
thioglucosidase
glucosinolates
Arabidopsis
mutants
fatty acid esters
5 Citations (Scopus)

Chemical composition and anti-inflammatory activity of the leaves of Byrsonima verbascifolia

Saldanha, A. A., Do Carmo, L. F., Do Nascimento, S. B., de Matos, N. A., de Carvalho Veloso, C., Castro, A. H. F., de Vos, R. C. H., Klein, A., de Siqueira, J. M., Carollo, C. A., Do Nascimento, T. V., Toffoli-Kadri, M. C. & Soares, A. C., 2016, In : Journal of Natural Medicines. 70, 4, p. 760-768

Research output: Contribution to journalArticleAcademicpeer-review

Anti-Inflammatory Agents
Flavonoids
Proanthocyanidins
Chemical analysis
Triterpenes
4 Citations (Scopus)

Effects of digested onion extracts on intestinal gene expression: an interspecies comparison using different intestine models

de Wit, N. J. W., Hulst, M. M., Govers, C. C. F. M., van der Meulen, J., van Hoef, A. M. A., Stoopen, G. M., Hamers, A. R. M., Hoekman, A. J. W., de Vos, C. H., Bovee, T. F. H., Smits, M. A., Mes, J. J. & Hendriksen, P. J. M., 15 Sep 2016, In : PLoS ONE. 11, 9, 18 p., e0160719.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Onions
Gene expression
onions
Intestines
intestines
11 Citations (Scopus)
Open Access
Solanum chmielewskii
Solanum lycopersicum
introgression
secondary metabolites
tomatoes
51 Citations (Scopus)

Improved batch correction in untargeted MS-based metabolomics

Wehrens, R., Hageman, J. A., van Eeuwijk, F., Kooke, R., Flood, P. J., Wijnker, E., Keurentjes, J. J. B., Lommen, A., van Eekelen, H. D. L. M., Hall, R. D., Mumm, R. & de Vos, R. C. H., 2016, In : Metabolomics. 12, 5, 88.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Metabolomics
Mass spectrometry
Mass Spectrometry
Quality control
Quality Control
5 Citations (Scopus)
Open Access
Metabolomics
Microfluidics
Biosensing Techniques
Biosensors
Assays
10 Citations (Scopus)

Multi-platform metabolomics analyses of a broad collection of fragrant and non-fragrant rice varieties reveals the high complexity of grain quality characteristics

Mumm, R., Hageman, J. A., Calingacion, M. N., de Vos, C. H., Jonker, H. H., Erban, A., Kopka, J., Hansen, T. H., Laursen, K. H., Schjoerring, J. K., Ward, J. L., Beale, M. H., Jongee, S., Rauf, A., Habibi, F., Indrasari, S. D., Sakhan, S., Ramli, A., Romero, M., Reinke, R. & 4 othersOhtsubo, K., Boualaphanh, C., Fitzgerald, M. A. & Hall, R. D., 23 Jan 2016, In : Metabolomics. 12, 2, 19 p., 38.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Metabolomics
Jasminum
Flavors
Genotype
Oryza
2015
5 Citations (Scopus)

A spatiotemporal model to assess the introduction risk of African horse sickness by import of animals and vectors in France

Faverjon, C., Leblond, A., Hendrikx, P., Balenghien, T., de Vos, C., Fischer, E. A. J. & de Koeijer, A. A., 4 Jun 2015, In : BMC Veterinary Research. 11, 1, 127.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
African Horse Sickness
African horse sickness
imports
France
Ceratopogonidae
1 Citation (Scopus)
Metabolomics
Phytochemicals
Transcription
Lycopersicon esculentum
Fruits
30 Citations (Scopus)

Comprehensive metabolomics to evaluate the impact of industrial processing on the phytochemical composition of vegetable purees

Lopez-Sanchez, P., de Vos, R. C. H., Jonker, H. H., Mumm, R., Hall, R. D., Bialek, L., Leenman, R., Strassburg, K., Vreeken, R., Hankemeier, T., Schumm, S. & van Duynhoven, J. P. M., 2015, In : Food Chemistry. 168, p. 348-355

Research output: Contribution to journalArticleAcademicpeer-review

Metabolomics
Brassica
Vegetables
Phytochemicals
metabolomics
25 Citations (Scopus)
Open Access
Metabolomics
Electrospray Ionization Mass Spectrometry
metabolomics
Laser Therapy
ionization
30 Citations (Scopus)

Towards Elucidating Carnosic Acid Biosynthesis in Lamiaceae: Funtional Characterization of the Three First Steps of the Pathway in Slavia Fruicosa and Rosmarinus officinalis

Bozic, D., Papaefthimiou, D., Brückner, K., de Vos, C. H. R., Tsoleridis, C. A., Katsarou, D., Papanikolaou, A., Pateraki, I., Chatzopoulou, F. M., Dimitriadou, E., Kostas, S., Manzano, D., Scheler, U., Ferrer, A., Tissier, A., Makris, A. M., Kampranis, S. C. & Kanellis, A., 2015, In : PLoS ONE. 10, 5, 28 p., e0124106.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Rosmarinus
Lamiaceae
Rosmarinus officinalis
Biosynthesis
Genes
2014
14 Citations (Scopus)
Glucosinolates
thermal degradation
Metabolomics
Brassica
Vegetables
44 Citations (Scopus)

Characterization of two genes for the biosynthesis of abietane-type diterpenes in rosemary (Rosmarinus officinalis) glandular trichomes

Brückner, K., Bozic, D., Manzano, D., Papaefthimiou, D., Pateraki, I., Scheler, U., Ferrer, A., de Vos, R. C. H., Kanellis, A. K. & Tissier, A., 2014, In : Phytochemistry. 101, p. 52-64

Research output: Contribution to journalArticleAcademicpeer-review

Abietane Diterpenes
Rosmarinus
Trichomes
Rosmarinus officinalis
Diterpenes
17 Citations (Scopus)

Control of anthocyanin and non-flavonoid compounds by anthocyanin-regulating MYB and bHLH transcription factors in Nicotiana benthamiana leaves

Outchkourov, N. S., Carollo, C. A., Gomez Roldan, M. V., de Vos, C. H., Bosch, H. J., Hall, R. D. & Beekwilder, M. J., 2014, In : Frontiers in Plant Science. 5, 9 p., 519.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
delphinidin
Nicotiana benthamiana
rutin
anthocyanins
transcription factors
32 Citations (Scopus)

Elucidation and in planta reconstitution of the parthenolide biosynthetic pathway

Liu, Q., Manzano, D., Tanic, N., Pesic, M., Bankovic, J., Pateraki, I., Ricard, L., Ferrer, A., de Vos, R. C. H., van der Krol, A. R. & Bouwmeester, H. J., 2014, In : Metabolic Engineering. 23, p. 145-153

Research output: Contribution to journalArticleAcademicpeer-review

Biosynthetic Pathways
Tanacetum parthenium
Genes
Biosynthesis
Gene encoding
18 Citations (Scopus)
Catechin
Methane
Ruminants
Greenhouse gases
Hydrogen
15 Citations (Scopus)

Genetic mapping of semi-polar metabolites in pepper fruits (Capsicum sp.): towards unravelling the molecular regulation of flavonoid quantitative trait loci

Wahyuni, Y., Stahl-Hermes, V., Ballester, A. R., de Vos, C. H., Voorrips, R. E., Maharijaya, A., Molthoff, J. W., Víquez Zamora, A. M., Sudarmonowati, E., Arisi, A. C. M., Bino, R. J. & Bovy, A. G., 2014, In : Molecular Breeding. 33, 3, p. 503-518

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Capsicum
Quantitative Trait Loci
sweet peppers
flavone
Flavonoids
24 Citations (Scopus)

In Silico Prediction and Automatic LC–MSn Annotation of Green Tea Metabolites in Urine

Ridder, L. O., van der Hooft, J. J. J., Verhoeven, S., de Vos, R. C. H., Vervoort, J. J. M. & Bino, R. J., 2014, In : Analytical Chemistry. 86, 10, p. 4767-4774

Research output: Contribution to journalArticleAcademicpeer-review

Metabolites
Tea
Ions
Liquid chromatography
Mass spectrometry
29 Citations (Scopus)

Metabolomics analysis of postharvest ripening heterogeneity of ‘Hass' avocadoes

Pedreschi, R., Munoz, P., Robledo, P., Becerra, C., Defilippi, B. G., van Eekelen, H. D. L. M., Mumm, R., Westra, E. H. & de Vos, R. C. H., 2014, In : Postharvest Biology and Technology. 92, p. 172-179

Research output: Contribution to journalArticleAcademicpeer-review

Persea
Metabolomics
avocados
metabolomics
ripening
39 Citations (Scopus)

Metabolomics as a Potential Chemotaxonomical Tool: Application in the Genus Vernonia Schreb

Martucci, M. E. P., de Vos, R. C. H. & Carollo, C. A., 2014, In : PLoS ONE. 9, 4, 8 p., e93149.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Vernonia
Metabolomics
Sesquiterpenes
sesquiterpenoid lactones
Phytochemicals
31 Citations (Scopus)

Metabolomics in melon: A new opportunity for aroma analysis

Allwood, J. W., Cheung, W. W. L., Xu, Y., Mumm, R., de Vos, C. H., Deborde, C., Biais, B., Maucourt, M., Berger, Y., Schaffer, A., Rolin, D., Moing, A., Hall, R. D. & Goodacre, R., 2014, In : Phytochemistry. 99, p. 61-72

Research output: Contribution to journalArticleAcademicpeer-review

Cucurbitaceae
Volatile Organic Compounds
Metabolomics
metabolomics
melons
14 Citations (Scopus)

Metabolomics reveals organ-specific metabolic rearrangements during early tomato seedling development

Gomez-Roldan, M. V., Engel, B., de Vos, R. C. H., Vereijken, P. F. G., Astola, L., Groenenboom, M. A. C., van de Geest, H. C., Bovy, A. G., Molenaar, J., van Eeuwijk, F. A. & Hall, R. D., 2014, In : Metabolomics. 10, 5, p. 958-974

Research output: Contribution to journalArticleAcademicpeer-review

Metabolomics
Lycopersicon esculentum
Metabolites
Seedlings
Hypocotyl
4 Citations (Scopus)

Metabolomic variation of brassica rapa var. rapa (var. raapstelen) and raphanus sativus l. at different developmental stages

Jahangir, M., Abdel-Farid, I. B., de Vos, C. H. R., Jonker, H. H., Choi, Y. H. & Verpoorte, R., 2014, In : Pakistan Journal of Botany. 46, 4, p. 1445-1452

Research output: Contribution to journalArticleAcademicpeer-review

Raphanus sativus
Brassica rapa
metabolomics
developmental stages
radishes
36 Citations (Scopus)

Novel chemistry of invasive plants: exotic species have more unique metabolomic profiles than native congeners

Macel, M., de Vos, R. C. H., Jansen, J. J., van der Putten, W. H. & van Dam, N. M., 2014, In : Ecology and Evolution. 4, 13, p. 2777-2786

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
metabolomics
metabolite
chemistry
native species
metabolites
7 Citations (Scopus)

Nutrikinetic modeling reveals order of genistein phase II metabolites appearance in human plasma

Smit, S., Szymanska, E., Kunz, I., Gomez Roldan, V., van Tilborg, M. W. E. M., Weber, P., Prudence, K., van der Kloet, F. M., van Duynhoven, J. P. M., Smilde, A. K., de Vos, R. C. H. & Bendik, I., 2014, In : Molecular Nutrition & Food Research. 58, 11, p. 2111-2121

Research output: Contribution to journalArticleAcademicpeer-review

Genistein
genistein
metabolites
Glucuronides
sulfates
31 Citations (Scopus)

Rapid and sustained systemic circulation of conjugated gut microbiol catabolites after single-dose black tea extract consumption

van Duynhoven, J. P. M., van der Hooft, J. J. J., van Dorsten, F. A., Peters, S., Foltz, M., Gomez-Roldan, V., Vervoort, J. J. M. & de Vos, R. C. H., 2014, In : Journal of Proteome Research. 13, 5, p. 2668-2678

Research output: Contribution to journalArticleAcademicpeer-review

Tea
Polyphenols
Metabolites
Pharmacokinetics
Plasmas
13 Citations (Scopus)

Regulatory Network of Secondary Metabolism in Brassica rapa: Insight into the Glucosinolate Pathway

Pino del Carpio, D., Kumar, R., Arends, D., Lin, K., de Vos, R. C. H., Muth, D., Kodde, J., Boutilier, K. A., Bucher, J., Wang, X., Jansen, R. C. & Bonnema, G., 2014, In : PLoS ONE. 9, 9, 11 p., e107123.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Secondary Metabolism
Glucosinolates
Brassica rapa
glucosinolates
Regulator Genes
2013
62 Citations (Scopus)

Automatic Chemical Structure Annotation of an LC-MSn Based Metabolic Profile from Green Tea

Ridder, L. O., van der Hooft, J. J. J., Verhoeven, S., de Vos, C. H., Bino, R. J. & Vervoort, J., 2013, In : Analytical Chemistry. 85, 12, p. 6033-6040

Research output: Contribution to journalArticleAcademicpeer-review

Metabolites
Molecules
Ions
Liquid chromatography
Complex Mixtures
26 Citations (Scopus)

Changes in polyphenol content during production of grape juice concentrate

Capanoglu, E., de Vos, R. C. H., Hall, R. D., Boyacioglu, D. & Beekwilder, M. J., 2013, In : Food Chemistry. 139, 1-4, p. 521-526

Research output: Contribution to journalArticleAcademicpeer-review

juice concentrates
grape juice
Anthocyanins
Vitis
Polyphenols
38 Citations (Scopus)

Changes in sour cherry (Prunus cerasus L.) antioxidants during nectar processing and in vitro gastrointestinal digestion.

Toydemir, G., Capanoglu, E., Kamiloglu, S., Boyacioglu, D., de Vos, C. H., Hall, R. D. & Beekwilder, M. J., 2013, In : Journal of Functional Foods. 5, 3, p. 1402-1413

Research output: Contribution to journalArticleAcademicpeer-review

Plant Nectar
Prunus cerasus
nectar
Digestion
Antioxidants
42 Citations (Scopus)

Citrus phenylpropanoids and defence against pathogens. Part I: Metabolic profiling in elicited fruits

Ballester, A. R., Lafuente, M. T., de Vos, R. C. H., Bovy, A. G. & González-Candelas, L., 2013, In : Food Chemistry. 136, 1, p. 178-185

Research output: Contribution to journalArticleAcademicpeer-review

Citrus fruits
Citrus
citrus fruits
metabolomics
phenylpropanoids
46 Citations (Scopus)

Detoxification of a-tomatine by Cladosporium fulvum is required for full virulence on tomato

Ökmen, B., Etalo, D. W., Joosten, M. H. A. J., Bouwmeester, H. J., de Vos, R. C. H., Collemare, J. A. R. & de Wit, P. J. G. M., 2013, In : New Phytologist. 198, 4, p. 1203-1214

Research output: Contribution to journalArticleAcademicpeer-review

Tomatine
Passalora fulva
Cladosporium
Lycopersicon esculentum
Virulence