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Research Output 1994 2020

Abstract

An unsupervised approach for the differential analysis of multiple LC/MS derived metabolic profiles

Vorst, O. F. J., Lommen, A., de Vos, C. H., Staps, R. V., Visser, R. G. F., Bino, R. J. & Hall, R. D., 2004, Book of abstracts third international congress on plant metabolomics, Ames, Iowa, 3-6 June 2004. Ames, Iowa, USA, p. 38-38

Research output: Chapter in Book/Report/Conference proceedingAbstractAcademic

Open Access

Coffee Metabolomics – a real kick!

de Vos, R. C. H., Borem, F. M., Bouwmeester, H. J., Hageman, J., Lindinger, C., Blanc, I., Bino, R. J. & Hall, R. D., 2009, Metabomeeting 2009, 5-8 July 2009, Norwich, UK. Norwich, UK.: Norwich BioScience Institutes, Institute of Food Research/John Innes Centre, p. 69

Research output: Chapter in Book/Report/Conference proceedingAbstractAcademic

metabolomics
coffee beans
metabolites
postharvest treatment
Coffea arabica

Flavonoid pathway engineering for improved food quality

Schijlen, E. G. W. M., de Vos, C. H., Jonker, H. H., Molthoff, J. W., van Tunen, A. J. & Bovy, A. G., 2004, Book of abstracts of the 10th Netherlands Biotechnology Congress, Ede, The Netherlands, 11-12 March 2004. p. 88

Research output: Chapter in Book/Report/Conference proceedingAbstract

High resolution QTOF MS as a screening tool for plant metabolomics

Hall, R. D., Verhoeven, H. A., de Vos, C. H., Lommen, A. & Bino, R. J., 2003.

Research output: Contribution to conferenceAbstractAcademic

Integrated metabolomics approaches as a complement to genomics tools in tomato and potato

de Vos, C. H., Bovy, A. G., Schijlen, E. G. W. M., Lommen, A., Tikunov, Y. M., Bouwmeester, H. J., Liberman, M., Levin, I., Hall, R. D. & Bino, R. J., 2004, Book of abstracts of the 1st Solanaceae Genome Workshop, Wageningen, The Netherlands, 19-21 September 2004. p. 108

Research output: Chapter in Book/Report/Conference proceedingAbstractAcademic

Metabolic profiling of a mutant Medicago population over-expressing Arabidopsis transcription factors.

van der Meer, I. M., de Vos, C. H., Bino, R. J., Lommen, A., Hall, R. D., Sumner, L. W., Huhman, D., Broeckling, C., Angenent, G. C. & Bosch, D., 2004, Book of abstracts third international congress on plant metabolomics, Ames, Iowa, 2004. Ames, Iowa, USA, p. 32-32

Research output: Chapter in Book/Report/Conference proceedingAbstract

Open Access

Metabolomic profiling of activation-tagged Arabidopsis mutants using QTOF-MS

de Vos, C. H., Verhoeven, H. A., Aharoni, A., Pereira, A. B., Bino, R. J. & Hall, R. D., 2003.

Research output: Contribution to conferenceAbstractAcademic

Metabolomics of tomato fruit volatile compounds

Tikunov, Y. M., de Vos, C. H., Lommen, A., Bino, R. J., Hall, R. D. & Bovy, A. G., 2004, Book of abstracts third international congress on plant metabolomics, Ames, Iowa, USA, 3-6 June 2004. Ames, Iowa, USA, p. 23

Research output: Chapter in Book/Report/Conference proceedingAbstractAcademic

metabolomics
volatile compounds
tomatoes
fruits
sensory properties

Metabolomics of tomato fruit volatile compounds

Tikunov, Y. M., de Vos, C. H., Lommen, A., Bino, R. J., Hall, R. D. & Bovy, A. G., 2004, Book of abstracts of the 1st Solanaceae Genome Workshop, 19-21 September 2004, Wageningen, The Netherlands. p. 107

Research output: Chapter in Book/Report/Conference proceedingAbstractAcademic

metabolomics
volatile compounds
tomatoes
fruits
sensory properties

Metabolomics research on potato and tomato

Hall, R. D., de Vos, C. H., Verhoeven, H., Tikunov, Y. M., Bouwmeester, H. J., Verstappen, F. W. A., Rani, K., Bovy, A. G., Vorst, O. F. J., Maliepaard, C. A., Lommen, A. & Bino, R. J., 2004, Book of abstracts 1st Solanaceae genome workshop, Wageningen, 19-21 September 2004. Wageningen, the Netherlands, p. 34-34

Research output: Chapter in Book/Report/Conference proceedingAbstractAcademic

Metabormatics for MS and development ideas

Lommen, A., Laue, G., Verhoeven, H. A., Nielen, M., Bouwmeester, H. J., de Vos, C. H., Hall, R. D., Gassmann, E. & Bino, R. J., 2003.

Research output: Contribution to conferenceAbstractAcademic

Plant metabolomics for plant breeding

Bino, R. J., Verhoeven, H. A., de Vos, C. H. & Hall, R. D., 2003, p. 1-11.

Research output: Contribution to conferenceAbstractAcademic

Screening tomato fruit for flavour and health using integrated metabolomics approaches

de Vos, C. H., Lommen, A., Jonker, H. H., Verstappen, F. W. A., Bouwmeester, H. J., Bino, R. J., Hall, R. D. & Bovy, A. G., 2004, Book of abstracts of the Third International Congress on Plant Metabolomics, Ames, Iowa, USA, 3-6 June 2004. p. 34

Research output: Chapter in Book/Report/Conference proceedingAbstractAcademic

Open Access

Tomatinase from Cladosporium fulvum is required for full virulence by degrading a-tomatine during tomato infection

Ökmen, B., Etalo, D. W., Collemare, J., Stergiopoulos, I., de Vos, R. C. H., Joosten, M. H. A. J. & de Wit, P. J. G. M., 2011, Book of Abstracts of the EPS PhD Autumn School 'Host-Microbe Interactomics', Wageningen, The Netherlands, 1-3 November 2011. Wageningen, The Netherlands, p. 37-38

Research output: Chapter in Book/Report/Conference proceedingAbstractAcademic

Passalora fulva
virulence
tomatoes
infection
Fusarium oxysporum

Untargeted metabolomics as a novel tool in coffee research

de Vos, C. H., Borém, F. M., Bouwmeester, H. J. & Bino, R. J., 2007.

Research output: Contribution to conferenceAbstractAcademic

Open Access
Article
21 Citations (Scopus)

Accurate mass error correction in liquid chromatography time-of-flight mass spectrometry based metabolomics

Mihaleva, V. V., Vorst, O. F. J., Maliepaard, C. A., Verhoeven, H. A., de Vos, C. H., Hall, R. D. & van Ham, R. C. H. J., 2008, In : Metabolomics. 4, 2, p. 171-182

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Boidae
Metabolomics
Automation
Liquid chromatography
Error correction
24 Citations (Scopus)

Activation of antioxidant response element in mouse primary cortical cultures with sesquiterpene lactones isolated from Tanacetum parthenium

Fischedick, J. T., Standiford, M., Johnson, D. A., de Vos, R. C. H., Todorovic, S., Banjanac, T., Verpoorte, R. & Johnson, J. A., 2012, In : Planta Medica. 78, 16, p. 1725-1730

Research output: Contribution to journalArticleAcademicpeer-review

Tanacetum parthenium
Antioxidant Response Elements
Sesquiterpenes
Lactones
Chemical activation

Ageing of tomato seeds is coupled to glutathione oxidation

de Vos, C. H. R., Kraak, H. L. & Bino, R. J., 1995, In : Physiologia Plantarum. 92, p. 131-139

Research output: Contribution to journalArticleAcademicpeer-review

A genetical metabolomics approach for bioprospecting plant biosynthetic gene clusters

Witjes, L., Kooke, R., van der Hooft, J. J. J., de Vos, R. C. H., Keurentjes, J. J. B., Medema, M. H. & Nijveen, H., 2 Apr 2019, In : BMC Research Notes. 12, 1, 194.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Plant Genes
Metabolomics
Multigene Family
Genes
Metabolites
31 Citations (Scopus)

A genomics and multi-platform metabolomics approach to identify new traits of rice quality in traditional and improved varieties

Callingacion, M. N., Boualaphanh, C., Daygon, V. D., Anacleto, R., Sackville Hamilton, R., Biais, B., Deborde, C., Maucourt, M., Moing, A., Mumm, R., de Vos, C. H., Erban, A., Kopka, J., Hansen, T. H., Laursen, K. H., Schjoerring, J. K., Hall, R. D. & Fitzgerald, M. A., 2012, In : Metabolomics. 8, 5, p. 771-783

Research output: Contribution to journalArticleAcademicpeer-review

Metabolomics
Genomics
Minerals
Nitrogen
Laos
363 Citations (Scopus)

A liquid chromatography-mass spectrometry-based metabolome database for tomato

Moco, S. I. A., Bino, R. J., Vorst, O. F. J., Verhoeven, H. A., de Groot, J. C. W., van Beek, T. A., Vervoort, J. J. M. & de Vos, C. H., 2006, In : Plant Physiology. 141, 4, p. 1205-1218

Research output: Contribution to journalArticleAcademicpeer-review

metabolome
Metabolome
Lycopersicon esculentum
Liquid Chromatography
liquid chromatography
15 Citations (Scopus)
Glucosinolates
thermal degradation
Metabolomics
Brassica
Vegetables
65 Citations (Scopus)

A non-directed approach to the differential analysis of multiple LC-MS-derived metabolic profiles

Vorst, O. F. J., de Vos, C. H., Lommen, A., Staps, R. V., Visser, R. G. F., Bino, R. J. & Hall, R. D., 2005, In : Metabolomics. 1, 2, p. 169-180

Research output: Contribution to journalArticleAcademicpeer-review

Metabolomics
Metabolome
Information Storage and Retrieval
Solanum tuberosum
Complex Mixtures
370 Citations (Scopus)
Metabolomics
metabolomics
Lycopersicon esculentum
Fruit
data analysis
308 Citations (Scopus)

Antioxidants, phenolic compounds, and nutritional quality of different strawberry genotypes

Tulipani, S., Mezzetti, B., Capocasa, F., Bompadre, S., Beekwilder, M. J., de Vos, C. H., Capanoglu, E., Bovy, A. G. & Battino, M., 2008, In : Journal of Agricultural and Food Chemistry. 56, 3, p. 696-704

Research output: Contribution to journalArticleAcademicpeer-review

Fragaria
Nutritive Value
strawberries
phenolic compounds
Antioxidants
137 Citations (Scopus)
raspberries
Metabolites
Fruits
Fruit
Antioxidants
8 Citations (Scopus)

Arabidopsis myrosinases link the glucosinolate-myrosinase system and the cuticle

Ahuja, I., de Vos, R. C. H., Rohloff, J., Stoopen, G. M., Halle, K. K., Ahmad, S. J. N., Hoang, L., Hall, R. D. & Bones, A. M., 2016, In : Scientific Reports. 6, 38990.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
thioglucosidase
glucosinolates
Arabidopsis
mutants
fatty acid esters
65 Citations (Scopus)
Open Access
phenylpropanoids
Lycopersicon esculentum
Fruit
tomatoes
fruits
5 Citations (Scopus)

A spatiotemporal model to assess the introduction risk of African horse sickness by import of animals and vectors in France

Faverjon, C., Leblond, A., Hendrikx, P., Balenghien, T., de Vos, C., Fischer, E. A. J. & de Koeijer, A. A., 4 Jun 2015, In : BMC Veterinary Research. 11, 1, 127.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
African Horse Sickness
African horse sickness
imports
France
Ceratopogonidae
1 Citation (Scopus)

Association between vitamin content, plant morphology and geographical origin in a worldwide collection of the orphan crop Gynandropsis gynandra (Cleomaceae)

Sogbohossou, E. O. D., Kortekaas, D., Achigan-Dako, E. G., Maundu, P., Stoilova, T., Van Deynze, A., de Vos, C. H. & Schranz, M. E., Sep 2019, In : Planta. 250, 3, p. 933-947 15 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Cleomaceae
Gynandropsis gynandra
vitamin content
Tocopherols
plant morphology
34 Citations (Scopus)
Plant extracts
Plant Extracts
Metabolites
Mass spectrometry
Nuclear magnetic resonance
25 Citations (Scopus)

Automated procedure for candidate compound selection in GCMS metabolomics based on prediction of Kovats retention index

Mihaleva, V. V., Verhoeven, H. A., de Vos, C. H., Hall, R. D. & van Ham, R. C. H. J., 2009, In : Bioinformatics. 25, 6, p. 787-794

Research output: Contribution to journalArticleAcademicpeer-review

Metabolomics
Gas Chromatography-Mass Spectrometry
Libraries
Hits
Prediction
66 Citations (Scopus)

Automatic Chemical Structure Annotation of an LC-MSn Based Metabolic Profile from Green Tea

Ridder, L. O., van der Hooft, J. J. J., Verhoeven, S., de Vos, C. H., Bino, R. J. & Vervoort, J., 2013, In : Analytical Chemistry. 85, 12, p. 6033-6040

Research output: Contribution to journalArticleAcademicpeer-review

Metabolites
Molecules
Ions
Liquid chromatography
Complex Mixtures
165 Citations (Scopus)

Biochemical and molecular analysis of pink tomatoes: deregulated expression of the gene encoding transcription factor SlMYB12 leads to pink tomato fruit colour

Ballester, A. R., Molthoff, J. W., de Vos, C. H., Lintel Hekkert, B., Orzaez, D., Fernandez-Moreno, J. P., Tripodi, S., Grandillo, S., Martin, C., Heldens, J., Ykema, M., Granell, A. & Bovy, A. G., 2010, In : Plant Physiology. 152, p. 71-84

Research output: Contribution to journalArticleAcademicpeer-review

Lycopersicon esculentum
Fruit
Transcription Factors
transcription factors
Color
61 Citations (Scopus)

Biosynthesis and localization of parthenolide in glandular trichomes of feverfew (Tanacetum parthenium L. Schulz Bip.)

Majdi, M., Liu, Q., Karimzadeh, G., Malboobi, M. A., Beekwilder, J., Cankar, K., de Vos, C. H., Todorovic, S., Simonovic, A. & Bouwmeester, H. J., 2011, In : Phytochemistry. 72, 14-15, p. 1739-1750

Research output: Contribution to journalArticleAcademicpeer-review

Tanacetum parthenium
Trichomes
Biosynthesis
trichomes
biosynthesis
9 Citations (Scopus)
Open Access
Solanum galapagense
Lycopersicon esculentum
Trichomes
Insects
Solanum
129 Citations (Scopus)

Carotenoid and Fatty Acid Metabolism in Light-Stressed Dunaliella salina

Lamers, P. P., Laak, C. W., Kaasenbrood, P. S., Lorier, J., Janssen, M. G. J., de Vos, C. H., Bino, R. J. & Wijffels, R. H., 2010, In : Biotechnology and Bioengineering. 106, 4, p. 638-648

Research output: Contribution to journalArticleAcademicpeer-review

Carotenoids
Fatty acids
Metabolism
Fatty Acids
Light
97 Citations (Scopus)

Carotenoid and fatty acid metabolism in nitrogen-starved Dunaliella salina, a unicellular green microalga

Lamers, P. P., Janssen, M., de Vos, R. C. H., Bino, R. J. & Wijffels, R. H., 2012, In : Journal of Biotechnology. 162, 1, p. 21-27

Research output: Contribution to journalArticleAcademicpeer-review

Carotenoids
Fatty acids
Metabolism
Nitrogen
Fatty Acids
188 Citations (Scopus)

Changes in antioxidant and metabolite profiles during production of tomato paste

Capanoglu, E., Beekwilder, M. J., Boyacioglu, D., Hall, R. D. & de Vos, C. H., 2008, In : Journal of Agricultural and Food Chemistry. 56, 3, p. 964-973

Research output: Contribution to journalArticleAcademicpeer-review

tomato paste
Lycopersicon esculentum
Ointments
Metabolites
Fruits
32 Citations (Scopus)

Changes in polyphenol content during production of grape juice concentrate

Capanoglu, E., de Vos, R. C. H., Hall, R. D., Boyacioglu, D. & Beekwilder, M. J., 2013, In : Food Chemistry. 139, 1-4, p. 521-526

Research output: Contribution to journalArticleAcademicpeer-review

juice concentrates
grape juice
Anthocyanins
Vitis
Polyphenols
41 Citations (Scopus)

Changes in sour cherry (Prunus cerasus L.) antioxidants during nectar processing and in vitro gastrointestinal digestion.

Toydemir, G., Capanoglu, E., Kamiloglu, S., Boyacioglu, D., de Vos, C. H., Hall, R. D. & Beekwilder, M. J., 2013, In : Journal of Functional Foods. 5, 3, p. 1402-1413

Research output: Contribution to journalArticleAcademicpeer-review

Plant Nectar
Prunus cerasus
nectar
Digestion
Antioxidants
136 Citations (Scopus)

Characterization of major enzymes and genes involved in flavonoid and proanthocyanidin biosynthesis during fruit development in strawberry (Fragaria x ananassa).

Almeida, J. R., d'Amico, E., Preuss, A., Carbone, F. & de Vos, C. H., 2007, In : Archives of Biochemistry and Biophysics. 465, 1, p. 61-71

Research output: Contribution to journalArticleAcademicpeer-review

Fragaria
Biosynthesis
Fruits
Flavonoids
Fruit
47 Citations (Scopus)

Characterization of Rhamnosidases from Lactobacillus plantarum and Lactobacillus acidophilus.

Beekwilder, M. J., Marcozzi, D., Vecchi, S., de Vos, C. H., Janssen, P., Francke, C., van Hylckama Vlieg, J. E. T. & Hall, R. D., 2009, In : Applied and Environmental Microbiology. 75, 11, p. 3447-3454

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
alpha-L-rhamnosidase
Lactobacillus acidophilus
Lactobacillus plantarum
Lactobacillus
Lycopersicon esculentum
28 Citations (Scopus)

Characterization of the natural variation in Arabidopsis thaliana metabolome by the analysis of metabolic distance

Houshyani Hassanzadeh, B., Kabouw, P., Muth, D., de Vos, R. C. H., Bino, R. J. & Bouwmeester, H. J., 2012, In : Metabolomics. 8, suppl. 1, p. 131-145

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Metabolome
Arabidopsis
Metabolites
Plasticity
Multivariate Analysis
48 Citations (Scopus)

Characterization of two genes for the biosynthesis of abietane-type diterpenes in rosemary (Rosmarinus officinalis) glandular trichomes

Brückner, K., Bozic, D., Manzano, D., Papaefthimiou, D., Pateraki, I., Scheler, U., Ferrer, A., de Vos, R. C. H., Kanellis, A. K. & Tissier, A., 2014, In : Phytochemistry. 101, p. 52-64

Research output: Contribution to journalArticleAcademicpeer-review

Abietane Diterpenes
Rosmarinus
Trichomes
Rosmarinus officinalis
Diterpenes
7 Citations (Scopus)

Chemical composition and anti-inflammatory activity of the leaves of Byrsonima verbascifolia

Saldanha, A. A., Do Carmo, L. F., Do Nascimento, S. B., de Matos, N. A., de Carvalho Veloso, C., Castro, A. H. F., de Vos, R. C. H., Klein, A., de Siqueira, J. M., Carollo, C. A., Do Nascimento, T. V., Toffoli-Kadri, M. C. & Soares, A. C., 2016, In : Journal of Natural Medicines. 70, 4, p. 760-768

Research output: Contribution to journalArticleAcademicpeer-review

Anti-Inflammatory Agents
Flavonoids
Proanthocyanidins
Chemical analysis
Triterpenes
43 Citations (Scopus)

Citrus phenylpropanoids and defence against pathogens. Part I: Metabolic profiling in elicited fruits

Ballester, A. R., Lafuente, M. T., de Vos, R. C. H., Bovy, A. G. & González-Candelas, L., 2013, In : Food Chemistry. 136, 1, p. 178-185

Research output: Contribution to journalArticleAcademicpeer-review

Citrus fruits
Citrus
citrus fruits
metabolomics
phenylpropanoids
1 Citation (Scopus)
Metabolomics
Phytochemicals
Transcription
Lycopersicon esculentum
Fruits
26 Citations (Scopus)

Comparative methods for association studies: a case study on metabolite variation in a Brassica rapa core collection

Pino del Carpio, D., Basnet, R. K., de Vos, C. H., Maliepaard, C. A., Paulo, M. J. & Bonnema, A. B., 2011, In : PLoS ONE. 6, 5, e19624.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Brassica rapa
kinship
Metabolites
metabolites
case studies
11 Citations (Scopus)

Comparison of nuclear replication activity and protein expression patterns during tomato seed germination

Bino, R. J., Bergervoet, J. H. W., de Vos, C. H. R., Kraak, H. L., Lanteri, S., van der Burg, W. J. & Zheng, X. Y., 1996, In : Field Crops Research. 45, 1-3, p. 71-77

Research output: Contribution to journalArticleAcademicpeer-review

imbibition
germination
seed germination
protein synthesis
tubulin