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Research Output 1996 2020

2020

Breeding top genotypes and accelerating response to recurrent selection by selecting parents with greater gametic variance

Bijma, P., Wientjes, Y. C. J. & Calus, M. P. L., 1 Jan 2020, In : Genetics. 214, 1, p. 91-107 17 p.

Research output: Contribution to journalArticleAcademicpeer-review

Human Herpesvirus 4
Breeding
Genotype
Germ Cells
Population

The economic value of R0 for selective breeding against microparasitic diseases

Janssen, K. & Bijma, P., 31 Jan 2020, In : Genetics, selection, evolution : GSE. 52, 1, 1 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
selective breeding
selection methods
economic valuation
genetic improvement
Economics
2019
1 Citation (Scopus)

A genome-wide association study for susceptibility and infectivity of Holstein Friesian dairy cattle to digital dermatitis

Biemans, F., de Jong, M. C. M. & Bijma, P., Jul 2019, In : Journal of Dairy Science. 102, 7, p. 6248-6262

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Digital Dermatitis
Genome-Wide Association Study
dermatitis
dairy cattle
Single Nucleotide Polymorphism

Animal breeding: the concept of inbreeding | WURcast

Bijma, P., 19 Mar 2019

Research output: Non-textual formDigital or Visual Products

Open Access
animal breeding
inbreeding
alleles

A note on genetic parameters and accuracy of estimated breeding values in honey bees

Brascamp, E. W. & Bijma, P., 27 Nov 2019, In : Genetics Selection Evolution. 51, 1, 71.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Honey
Bees
honey
breeding value
queen insects

Can breeders solve mortality due to feather pecking in laying hens?

Ellen, E. D. & Bijma, P., 1 Sep 2019, In : Poultry Science. 98, 9, p. 3431-3442 12 p.

Research output: Contribution to journalArticleAcademicpeer-review

feather pecking
laying hens
marker-assisted selection
breeding
poultry industry

Correction to: Validation of genomic predictions for body weight in broilers using crossbred information and considering breed-of-origin of alleles

Duenk, P., Calus, M. P. L., Wientjes, Y. C. J., Breen, V. P., Henshall, J. M., Hawken, R. & Bijma, P., 11 Nov 2019, In : Genetics, selection, evolution : GSE. 51, 1, 1 p., 63.

Research output: Contribution to journalComment/Letter to the editorAcademic

Open Access
Publications
genomics
crossbreds
allele
broiler chickens

Effects of group mate relatedness on body weight and variability of body weight in Nile tilapia

Marjanovic, J., Khaw, H. L., Mulder, H. A. & Bijma, P., 28 Aug 2019, Book of Abstracts of the 70th Annual Meeting of the European Federation of Animal Science. Wageningen: Wageningen Academic Publishers, p. 513

Research output: Chapter in Book/Report/Conference proceedingAbstractAcademic

group effect
Oreochromis niloticus
body weight
kin selection
rearing
2 Citations (Scopus)

Estimating the purebred-crossbred genetic correlation of body weight in broiler chickens with pedigree or genomic relationships

Duenk, P., Calus, M. P. L., Wientjes, Y. C. J., Breen, V. P., Henshall, J. M., Hawken, R. & Bijma, P., 19 Feb 2019, In : Genetics Selection Evolution. 51, 1, 447.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Pedigree
purebreds
pedigree
genetic correlation
Chickens

GBS-based genomic prediction for the improvement of natural enemies in biocontrol

Xia, S., Pannebakker, B. A., Groenen, M., Zwaan, B. J. & Bijma, P., 26 Aug 2019, Book of Abstracts of the 70th Annual Meeting of the European Federation of Animal Science. Wageningen: Wageningen Academic Publishers, p. 162-162 (Book of Abstracts).

Research output: Chapter in Book/Report/Conference proceedingAbstractAcademic

natural enemies
genotyping
biological control
genomics
prediction
Open Access
Digital Dermatitis
Basic Reproduction Number
infectivity
dermatitis
breeding value

Genetic solutions to reduce injurious pecking in laying hens

Ellen, E. D. & Bijma, P. (ed.), 15 May 2019, Poultry feathers and skin: the poultry integument in health and welfare. Olukosi, O. A., Olori, V. E. & Helmbrecht, A. (eds.). CABI, p. 47-56

Research output: Chapter in Book/Report/Conference proceedingChapterAcademicpeer-review

feather pecking
pecking
laying hens
marker-assisted selection
selection intensity

Hygienic behaviour in honeybees: a comparison of two recording methods and estimation of genetic parameters

Facchini, E., Bijma, P., Pagnacco, G., Rizzi, R. & Brascamp, E. W., 25 Apr 2019, In : Apidologie. 50, 2, p. 163-172 10 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
honey bees
heritability
repeatability
apiaries
methodology

Improving accuracy of direct and maternal genetic effects in genomic evaluations using pooled boar semen: a simulation study

Maiorano, A. M., Assen, A., Bijma, P., Chen, C. Y., Silva, J. A. I. V., Herring, W. O., Tsuruta, S., Misztal, I. & Lourenco, D. A. L., 30 Jul 2019, In : Journal of Animal Science. 97, 8, p. 3237-3245

Research output: Contribution to journalArticleAcademicpeer-review

Semen
boars
semen
Mothers
genomics

Inbreeding depression due to recent and ancient inbreeding in Dutch Holstein-Friesian dairy cattle

Doekes, H. P., Veerkamp, R. F., Bijma, P., de Jong, G., Hiemstra, S. J. & Windig, J. J., 27 Sep 2019, In : Genetics, selection, evolution : GSE. 51, 1, 16 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
inbreeding depression
Inbreeding
inbreeding
dairy cattle
cattle

Models with indirect genetic effects depending on group sizes: A simulation study assessing the precision of the estimates of the dilution parameter

Heidaritabar, M., Bijma, P., Janss, L., Bortoluzzi, C., Nielsen, H. M., Madsen, P., Ask, B. & Christensen, O. F., 30 May 2019, In : Genetics Selection Evolution. 51, 1, 24.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
group size
Interpersonal Relations
dilution
Confidence Intervals
Phenotype

Not all inbreeding is depressing

Doekes, H. P., Veerkamp, R. F., Bijma, P., Hiemstra, S. J., de Jong, G. & Windig, J. J., 26 Aug 2019, Book of Abstracts of the 70th Annual Meeting of the European Federation of Animal Science. Wageningen: Wageningen Academic Publishers, p. 142-142 (Book of Abstracts).

Research output: Chapter in Book/Report/Conference proceedingAbstractAcademic

inbreeding
inbreeding depression
homozygosity
ancestry
calving interval

Optimizing genomic breeding program designs to improve crossbred performance

Wientjes, Y. C. J., Bijma, P. & Calus, M. P. L., 27 Aug 2019, Book of Abstracts of the 70th Annual Meeting of the European Federation of Animal Science. Wageningen: Wageningen Academic Publishers, Vol. 25. p. 289-289 (EAAP Book of Abstracts; vol. 25).

Research output: Chapter in Book/Report/Conference proceedingAbstractAcademic

purebreds
crossbreds
genomics
breeding
sires

The evolution of the genetic architecture of traits under artificial selection

Wientjes, Y. C. J., Bijma, P., Calus, M. P. L., Zwaan, B. J. & Van Den Heuvel, J., 20 Aug 2019, p. S10.P13.

Research output: Contribution to conferencePosterAcademic

Open Access
artificial selection
loci
marker-assisted selection
genetic variation
gene frequency
1 Citation (Scopus)

Validation of genomic predictions for body weight in broilers using crossbred information and considering breed-of-origin of alleles

Duenk, P., Calus, M. P. L., Wientjes, Y. C. J., Breen, V. P., Henshall, J. M., Hawken, R. & Bijma, P., 8 Jul 2019, In : Genetics Selection Evolution. 51, 1, 38.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Breeding
genomics
crossbreds
allele
broiler chickens

Value of gene bank material for the commercial breeding population of Dutch Holstein Friesian cattle

Windig, J. J., Doekes, H. P. (ed.), Veerkamp, R. F. (ed.), Bijma, P. (ed.) & Hiemstra, S. J. (ed.), 26 Aug 2019, Value of gene bank material for the commercial breeding population of Dutch Holstein Friesian cattle. Wageningen: Wageningen Academic Publishers, p. 368-368 (Book of Abstracts).

Research output: Chapter in Book/Report/Conference proceedingAbstractAcademic

2018

Accuracy of genomic estimated breeding values for crossbred performance in broilers using a purebred or crossbred reference population

Duenk, P., Calus, M. P. L., Wientjes, Y. C. J., Breen, V., Henshall, J., Hawken, R. & Bijma, P., 11 Feb 2018, Proceedings of the 11th World Congress on Genetics Applied to Livestock Production: Volume Methods and Tools - Prediction 3. WCGALP, 5 p. 220

Research output: Chapter in Book/Report/Conference proceedingConference paper

Open Access
purebreds
breeding value
crossbreds
broiler chickens
genomics

Breeding programs to improve survival time in laying hens

Ellen, E. D. & Bijma, P., Aug 2018, Book of Abstracts of the 69th Annual Meeting of the European Federation of Animal Science. Wageningen Academic Publishers, Vol. 24. p. 526-526

Research output: Chapter in Book/Report/Conference proceedingAbstractAcademic

laying hens
breeding
genotype
selection index
selection methods

Capturing indirect genetic effects on phenotypic variability

Marjanovic, J., Mulder, H. A., Ronnegard, L., de Koning, D. J. & Bijma, P., Aug 2018, Book of Abstracts of the 69th Annual Meeting of the European Federation of Animal Science. Wageningen Academic Publishers, p. 577-577 (Book of abstracts; vol. 24).

Research output: Chapter in Book/Report/Conference proceedingAbstractAcademic

plant competition
genetic variation
quantitative traits
statistical models
aquaculture
3 Citations (Scopus)

Correction to: Heritabilities and genetic correlations for honey yield, gentleness, calmness and swarming behaviour in Austrian honey bees

Brascamp, E. W., Willam, A., Boigenzahn, C., Bijma, P. & Veerkamp, R. F., Aug 2018, In : Apidologie. 49, 4, p. 462-463

Research output: Contribution to journalComment/Letter to the editorAcademic

Open Access
swarming
phenotypic variation
honey
genetic correlation
honey bees

Derivation of the economic value of r0 for macroparasites: application to sea lice in salmon

Janssen, K. P. E., Komen, J., Saatkamp, H. W., de Jong, M. C. M. & Bijma, P., Jul 2018.

Research output: Contribution to conferencePosterAcademic

louse
economics
sea
3 Citations (Scopus)

Derivation of the economic value of R0 for macroparasitic diseases and application to sea lice in salmon

Janssen, K., Komen, H., Saatkamp, H. W., de Jong, M. C. M. & Bijma, P., 3 Oct 2018, In : Genetics Selection Evolution. 50, 1, 47.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Copepoda
Caligidae
louse
economic valuation
Oceans and Seas
5 Citations (Scopus)

Digital Dermatitis in dairy cattle: The contribution of different disease classes to transmission

Biemans, F., Bijma, P., Boots, N. M. & de Jong, M. C. M., Jun 2018, In : Epidemics. 23, p. 76-84

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Digital Dermatitis
Infection
Foot
Basic Reproduction Number
Hoof and Claw

Genomic selection and inbreeding and kinship in Dutch-Flemish Holstein Friesian cattle

Doekes, H. P., Veerkamp, R. F., Bijma, P., Hiemstra, S. J., Ursinus, W. W., van der Beek, S. & Windig, J. J., 2018, Proceedings of the 11th World Congress on Genetics Applied to Livestock Production: Volume Theory to Application 2. 5 p. 11.90

Research output: Chapter in Book/Report/Conference proceedingConference paperAcademic

Open Access
kinship
marker-assisted selection
inbreeding
Holstein
cattle

Increasing genetic gain by selecting for higher Mendelian sampling variance

Bijma, P., Wientjes, Y. C. J. & Calus, M. P. L., 1 Feb 2018, Proceedings of the 11th World Congress on Genetics Applied to Livestock Production: Volume Genetic Gain - Breeding Strategies 2. WCGALP, 5 p. 47

Research output: Chapter in Book/Report/Conference proceedingConference paperAcademicpeer-review

Open Access
genetic improvement
germ cells
breeding
dairy cattle
linkage (genetics)
2 Citations (Scopus)

Indirect Genetic Effects for Growth in Pigs Affect Behaviour and Weight Around Weaning

Camerlink, I., Ursinus, W. W., Bartels, A. C., Bijma, P. & Bolhuis, J. E., Sep 2018, In : Behavior Genetics. 48, 5, p. 413-420

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
weaning
weaning weight
Weaning
pig
Swine

Maternal Effects in a Wild Songbird Are Environmentally Plastic but Only Marginally Alter the Rate of Adaptation

Ramakers, J. J. C., Cobben, M. M. P., Bijma, P., Reed, T. E., Visser, M. E. & Gienapp, P., 26 Mar 2018, In : American Naturalist. 191, 5, p. E000 – E000

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
maternal effect
songbird
songbirds
plastics
plastic
5 Citations (Scopus)

Modelling the co-evolution of indirect genetic effects and inherited variability

Marjanovic, J., Mulder, H. A., Rönnegård, L. & Bijma, P., 28 Mar 2018, In : Heredity. 121, p. 631–647

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Molecular Evolution
Genetic Models
Phenotype
Aquaculture
Agriculture

Models with indirect genetic effects depeding on group sizes - A simulation study assessing the precision of the estimates of the dilution

Heidaritabar, M., Bijma, P., Janss, L. G., Bortoluzzi, C., Nielsen, H. M., Ask, B. & Christensen, O. F., Feb 2018, Proceedings of the World Congress on Genetics Applied to Livestock Production: Volume Biology - Behaviour. WCGALP, 38

Research output: Chapter in Book/Report/Conference proceedingConference paperAcademic

Open Access
group size
group effect
phenotype
2 Citations (Scopus)
Open Access
genetic correlation
disequilibrium
Linkage Disequilibrium
Population
linkage disequilibrium
1 Citation (Scopus)

Sensitivity of the breeding values for growth rate and worm egg count to environmental worm burden in Australian Merino sheep

Hollema, B. L., Bijma, P. & van der Werf, J. H. J., Oct 2018, In : Journal of Animal Breeding and Genetics. 135, 5, p. 357-365

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Merino
breeding value
Breeding
Ovum
Sheep

Software Development for Deterministic Prediction of Selection Response in Livestock Breeding Programs Using Genomic Information

Su, H., Bijma, P., van der Werf, J. & Dekkers, J. C. M., Apr 2018, In : Journal of Animal Science. 96, Supplement 2, p. 19-19 35.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
selection response
livestock breeding
Livestock
Breeding
Software

The economic value of R0 for macroparasitic diseases

Janssen, K. P. E., Saatkamp, H. W., Bijma, P., de Jong, M. C. M. & Komen, J., 16 Feb 2018, Proceedings of the World Congress on Genetics Applied to Livestock Production: Volume Genetic gain - Breeding Objectives and Economics of Selection Schemes 2. WCGALP, 8 p. 1021

Research output: Chapter in Book/Report/Conference proceedingConference paperAcademicpeer-review

Open Access
economic valuation
Caligidae
breeding
salmon
epidemiology
2 Citations (Scopus)

The genetic architecture of socially-affected traits: a GWAS for direct and indirect genetic effects on survival time in laying hens showing cannibalism

Brinker, T., Bijma, P., Vereijken, A. & Ellen, E. D., 23 Jul 2018, In : Genetics Selection Evolution. 50, 1, 38.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Cannibalism
Genome-Wide Association Study
cannibalism
laying hens
Single Nucleotide Polymorphism
13 Citations (Scopus)
Open Access
Inbreeding
inbreeding
Breeding
Holstein
genome
6 Citations (Scopus)
Open Access
genetic merit
germplasm conservation
Breeding
Fertility
bulls
2017
6 Citations (Scopus)

A model to estimate effects of SNPs on host susceptibility and infectivity for an endemic infectious disease

Biemans, F., de Jong, M. C. M. & Bijma, P., 2017, In : Genetics, Selection, Evolution. 49, 13 p., 53.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Endemic Diseases
infectivity
infectious disease
single nucleotide polymorphism
infectious diseases
3 Citations (Scopus)

Benefits of dominance over additive models for the estimation of average effects in the presence of dominance

Duenk, P., Calus, M. P. L., Wientjes, Y. C. J. & Bijma, P., 1 Oct 2017, In : G3 : Genes Genomes Genetics. 7, 10, p. 3405-3414

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Gene Frequency
Genotype
Genetic Models
Sample Size
Population
Open Access
4 Citations (Scopus)

Estimation of total genetic effects for survival time in crossbred laying hens showing cannibalism, using pedigree or genomic information

Brinker, T., Raymond, B., Bijma, P., Vereijken, A. & Ellen, E. D., 2017, In : Journal of Animal Breeding and Genetics. 134, 1, p. 60-68

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Cannibalism
cannibalism
Pedigree
pedigree
laying hens

Genetic solutions to reduce injurious pecking

Ellen, E. D. & Bijma, P., Jul 2017.

Research output: Contribution to conferenceAbstractAcademic

Genome-wide association study for direct and indirect genetic effects on survival time in layers

Ellen, E. D., Brinker, T. & Bijma, P., 2017, Book of Abstracts of the 68th Annual Meeting of the European Federation of Animal Science. Wageningen: Wageningen Academic Publishers, p. 207-207 (Book of abstracts; no. 23).

Research output: Chapter in Book/Report/Conference proceedingAbstractAcademic

Models with indirect genetic e!ects depending on group sizes - simulation study

Heidaritabar, M., Bijma, P., Janss, L. G., Bortoluzzi, C., Nielsen, H. M., Ask, B. & Christensen, O. F., Aug 2017, Book of Abstracts of the 69th Annual Meeting of the European Federation of Animal Science. Wageningen Academic Publishers, Vol. 23. p. 207-207 (Book of abstracts; no. 23).

Research output: Chapter in Book/Report/Conference proceedingAbstractAcademic

Open Access
group size
group effect
population size
13 Citations (Scopus)
Metagenomics
Population
Dental Scaling
Population Genetics
Gene Frequency