Ole Madsen

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Research Output

40 Article
21 Abstract
9 Poster
2 Conference paper
5 More

Altered hippocampal epigenetic regulation underlying reduced cognitive development in response to early life environmental insults

Schachtschneider, K. M., Welge, M. E., Auvil, L. S., Chaki, S., Rund, L. A., Madsen, O., Elmore, M. R. P., Johnson, R. W., Groenen, M. A. M. & Schook, L. B., 4 Feb 2020, In : Genes. 11, 2, 162.

Research output: Contribution to journal › Article › Academic › peer-review

Open Access

Impact of genotype, body weight and sex on the prenatal muscle transcriptome of Iberian pigs

García-Contreras, C., Madsen, O., Groenen, M. A. M., López-García, A., Vázquez-Gómez, M., Astiz, S., Núñez, Y., Benítez, R., Fernández, A., Isabel, B., Rey, A. I., González-Bulnes, A. & Óvilo, C., 28 Jan 2020, In : PLoS ONE. 15, 1, e0227861.

Research output: Contribution to journal › Article › Academic › peer-review

Open Access

1 Citation (Scopus)

The chromosome-scale genome assembly of Visayan warty pig provides insight into porcine evolutionary history

Liu, L., Megens, H. J. W. C., Crooijmans, R. P. M. A., Groenen, M. & Madsen, O., 14 Feb 2020, WIAS Annual Conference 2020: Frontiers in Animal Sciences. WIAS, p. 25-25

Research output: Chapter in Book/Report/Conference proceeding › Abstract

Open Access

Altered hippocampal epigenetic regulation underlying reduced cognitive development in response to early life environmental insults

Schachtschneider, K. M., Welge, M. E., Auvil, L. S., Chaki, S., Rund, L. A., Madsen, O., Elmore, M. R. P., Johnson, R. W., Groenen, M. & Schook, L. B., 7 Jul 2019, ISAG 2019 Abstract Book: 37th International Society for Animal Genetics Conference, July 7-12, 2019 - Lleida, Spain. p. 158-158

Research output: Chapter in Book/Report/Conference proceeding › Abstract

Broadening the miRNA catalogue in livestock species: A contribution to the functional annotation of animal genomes.

Amaral, A. J., Anthon, C., Corsi, G., Vasconcelos, A., Marthey, S., Hoffmann, A., Lagnel, J., Haack, F., Pokharel, K., Palasca, O., Seemann, S. E., Gama, L., Groenen, M., Kantanen, J., Crooijmans, R. P. M. A., Rijnkels, M., Kalbfleisch, T., Giuffra, E., Stadler, P. F., Madsen, O. & 1 others, Gorodkin, J., 9 Jul 2019, ISAG 2019 Abstracts Book: 37th International Society for Animal Genetics Conference, July 7-12, 2019 - Lleida, Spain. p. 51-52

Research output: Chapter in Book/Report/Conference proceeding › Abstract

Datasets

Data from: Testing models of speciation from genome sequences: divergence and asymmetric admixture in Island Southeast Asian Sus species during the Plio-Pleistocene climatic fluctuations

Frantz, L. A. F. (Creator), Madsen, O. (Creator), Megens, H. (Creator), Groenen, M. (Creator), Lohse, H. (Creator), Wageningen UR, 9 Oct 2014

DOI: 10.5061/dryad.1q0h6

Dataset

Wageningen University & Research Animal Breeding and Genomics FAANG data from three boars

Derks, M. (Creator), Lopes, M. S. (Creator), Bosse, M. (Creator), Madsen, O. (Creator), Dibbits, B. (Creator), Harlizius, B. (Creator), Groenen, M. (Creator), Megens, H. (Creator), Wageningen University, 1 Feb 2017

https://www.ebi.ac.uk/ena/data/view/PRJEB19268

Dataset

Data from: Untangling the hybrid nature of modern pig genomes: a mosaic derived from biogeographically distinct and highly divergent Sus scrofa populations

Bosse, M. (Creator), Megens, H. (Creator), Madsen, O. (Creator), Frantz, L. A. F. (Creator), Paudel, Y. (Creator), Crooijmans, R. (Creator), Groenen, M. (Creator), Wageningen UR, 3 Jun 2014

DOI: 10.5061/dryad.33982

Dataset

Analyses of Eurasian wild and domestic pig genomes reveal long-term gene flow and selection during domestication

Frantz, L. A. F. (Creator), Schraiber, J. G. (Creator), Madsen, O. (Creator), Megens, H. (Creator), Cagan, A. (Creator), Bosse, M. (Creator), Paudel, Y. (Creator), Crooijmans, R. (Creator), Larson, G. (Creator), Groenen, M. (Creator), Wageningen University, 27 Aug 2015

https://www.ebi.ac.uk/ena/data/view/PRJEB9922

Dataset

WGS of pygmy hog and Babyrousa babyrussa

Liu, L. (Creator), Bosse, M. (Creator), Megens, H. (Creator), Frantz, L. A. F. (Creator), Lee, Y. L. (Creator), Irving-Pease, E. K. (Creator), Narayan, G. (Creator), Groenen, M. (Creator), Madsen, O. (Creator), Wageningen University & Research, 30 Apr 2019

https://www.ebi.ac.uk/ena/data/view/PRJEB30129

Dataset

Activities

10 Oral presentation
1 Public lecture/debate/seminar

Pig Genome Evolution: De Novo Assembly and Annotation of the Genome of the Visayan Warty Pig (Sus cebifrons)

Langqing Liu (Contributor), Ole Madsen (Contributor), Q. Huang (Contributor), Martijn Derks (Contributor), Hendrik-Jan Megens (Contributor), Richard Crooijmans (Contributor), Martien Groenen (Speaker)

11 Jan 2020 → 15 Jan 2020

Activity: Talk or presentation › Public lecture/debate/seminar

Longitudinal RNA-seq Analysis of Tissue Development Reveals the Hub genes that Influencing the Chicken Intramuscular Fat and Abdominal Fat Deposition

Siyuan Xing (Speaker), Ranran Liu (Contributor), Richard Crooijmans (Contributor), Lu Liu (Contributor), Ole Madsen (Contributor), Wu Zhou (Contributor), Huanxian Cui (Contributor), Qinghe Li (Contributor), Maiqing Zheng (Contributor), Guiping Zhao (Contributor), Martien Groenen (Contributor), Jie Wen (Contributor)

24 Jun 2019

Activity: Talk or presentation › Oral presentation

Broadening the miRNA Catalogue in Livestock Species

A.J. Amaral (Speaker), Sylvain Marthey (Contributor), A. Hoffmann (Contributor), Jacques Lagnel (Contributor), Fiete Haack (Contributor), Kisun Pokharel (Contributor), O. Palasca (Contributor), P.F. Stadler (Contributor), C. Anthon (Contributor), S.E. Seemann (Contributor), Anoop Arya (Contributor), Luis Gama (Contributor), Martien Groenen (Contributor), Juha Kantanen (Contributor), Richard Crooijmans (Contributor), Elisabetta Giuffra (Contributor), Ole Madsen (Contributor), J. Gorodkin (Contributor)

14 Jan 2018

Activity: Talk or presentation › Oral presentation