Research output per year
Research output per year
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Dive into the research topics where Niek de Jonge is active. These topic labels come from the works of this person. Together they form a unique fingerprint.
- 1 Similar Profiles
Collaborations and top research areas from the last five years
Recent external collaboration on country/territory level. Dive into details by clicking on the dots or
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Correction to: Studying Plant Specialized Metabolites Using Computational Metabolomics Strategies
Mutabdžija, L., Myoli, A., de Jonge, N. F., Damiani, T., Schmid, R., van der Hooft, J. J. J., Tugizimana, F. & Pluskal, T., 21 Nov 2024, Plant Functional Genomics: Methods and Protocols, Volume 2. Maghuly, F. (ed.). New York: Humana Press, p. C1-C2 (Methods in molecular biology; vol. 2788).Research output: Chapter in Book/Report/Conference proceeding › Foreword/postscript › Academic
Open Access -
Dual mode MS2Deepscore model
de Jonge, N. F., van der Hooft, J. J. J. & Huber, F., 13 Mar 2024Research output: Non-textual form › Software
Open Access -
Effective data visualization strategies in untargeted metabolomics
Mildau, K., Ehlers, H., Meisenburg, M., Del Pup, E., Koetsier, R. A., Torres Ortega, L. R., de Jonge, N. F., Singh, K. S., Ferreira, D., Othibeng, K., Tugizimana, F., Huber, F. & van der Hooft, J. J. J., 2 Dec 2024, (E-pub ahead of print) In: Natural Product Reports. 38 p.Research output: Contribution to journal › Literature review › peer-review
Open Access -
MassSpecGym: A benchmark for the discovery and identification of molecules
Bushuiev, R., Bushuiev, A., de Jonge, N. F., Young, A., Kretschmer, F., Samusevich, R., Heirman, J., Wang, F., Zhang, L., Dührkop, K., Ludwig, M., Haupt, N. A., Kalia, A., Brungs, C., Schmid, R., Greiner, R., Wang, B., Wishart, D. S., Liu, L. P. & Rousu, J. & 10 others, , 2024, 38th Conference on Neural Information Processing Systems (NeurIPS 2024). Globerson, A., Mackey, L., Belgrave, D., Fan, A., Paquet, U., Tomczak, J. & Zhang, C. (eds.). NeurIPS Foundation, 18 p. (Advances in Neural Information Processing Systems; vol. 37).Research output: Chapter in Book/Report/Conference proceeding › Conference paper › Academic › peer-review
Open Access1 Citation (Scopus) -
MS2Deepscore 2.0 model for running in Java (MZMine)
de Jonge, N. F., 8 Oct 2024Research output: Non-textual form › Software
Open Access
Datasets
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MS2Query negative mode model and library 15_12_21
de Jonge, N. (Creator), Wageningen University & Research, 22 Sept 2022
Dataset
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Ranunculales supplementary data
Mutabdžija, L. (Creator), Myoli, A. (Creator), de Jonge, N. (Creator), Damiani, T. (Creator), Schmid, R. (Creator), van der Hooft, J. (Creator), Tugizimana, F. (Creator) & Pluskal, T. (Creator), Zenodo, 30 Mar 2023
Dataset
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Matchms cleaned mass spectral library positive mode
de Jonge, N. (Creator), Wageningen University & Research, 26 Jun 2024
Dataset
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MS2Query results 20-fold cross validation
de Jonge, N. (Creator), Wageningen University & Research, 12 Dec 2022
Dataset
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Training split MS2Deepscore
de Jonge, N. (Creator), Wageningen University & Research, 15 Oct 2024
Dataset
Projects
- 1 Active
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Spec2Bed: Innovative Metabolite Grouping to Learn structure and Function from Metabolomics Profiles
de Jonge, N. (PhD candidate), de Ridder, D. (Promotor) & van der Hooft, J. (Co-promotor)
15/09/21 → …
Project: PhD