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Research Output 1988 2019

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Poster
2019

Detection of reciprocal translocations using short read sequencing

Bouwman, A. C., te Pas, M. F. W., Derks, M. F. L., Groenen, M., Veerkamp, R. F., Broekhuijse, M. L. W. J. & Harlizius, B., 10 Feb 2019.

Research output: Contribution to conferencePosterAcademic

Open Access
genomics
homozygosity
inbreeding
population size
genome
2018
Open Access
Open Access
homozygosity
demography
poultry
genome
2017

Acomprehensive set of lncRNAs on porcine chromosomeX

Madsen, O. & Groenen, M., 15 Jan 2017.

Research output: Contribution to conferencePosterAcademic

Long Noncoding RNA
Swine
Quantitative Trait Loci
Neurogenesis
Gene Expression Regulation

A Study of Pig Chromosome X lncRNA Expression

Djebali, S., Palasca, O., Anthon, C., Derrien, T., Madsen, O., Thomas, M., Floden, E., Havgaard, J. H., Seemann, S. E., Gonzales, J. M., Junge, A., Pacholewska, A., Billis, K., Alkan, F., Eory, L., Amaral, A., Prieto Barja, P., Stadler, P. F., Notredame, C., Groenen, M. & 2 others, Harrow, J. & Gorodkin, J., Jan 2017.

Research output: Contribution to conferencePosterAcademic

A survey of deleterious variants in highly managed commercial layer lines

Derks, M. F. L., Megens, H. J. W. C., Bosse, M., Gross, C., Reijnders, M., de Ridder, D. & Groenen, M., 2017.

Research output: Contribution to conferencePosterAcademic

Open Access

Comprehensive analysis of RNA-editing in pigs suggest evolutionary conservation of RNA-editing in mammals

Madsen, O., Crooijmans, R. P. M. A., Schachtschneider, K. M. & Groenen, M., 23 Aug 2017.

Research output: Contribution to conferencePosterAcademic

Survey of deleterious variants in highly managed commercial layer lines

Derks, M. F. L., Megens, H. J. W. C., Bosse, M., Gross, C., Reijnders, M., de Ridder, D. & Groenen, M., Apr 2017.

Research output: Contribution to conferencePosterAcademic

2016

Communications as an important Component of the Functional Annotation of Animal Genomes (FAANG) Consortium

Groenen, M., Archibald, A. L. & Tuggle, C. K., Jan 2016.

Research output: Contribution to conferencePosterAcademic

Detection of deleterious genomic variation in domesticated animals

Derks, M. F. L., Megens, H. J. W. C., Bosse, M., Gross, C., Reijnders, M., de Ridder, D. & Groenen, M., 19 Apr 2016.

Research output: Contribution to conferencePosterAcademic

Open Access

Predicting Impact of Variation in Livestock

Gross, C., Reinders, M., de Ridder, D., Derks, M. F. L., Bosse, M., Megens, H. J. W. C. & Groenen, M., 19 Apr 2016.

Research output: Contribution to conferencePosterAcademic

Predicting the impact of genetic variation in livestock

Gross, C., Reinders, M., de Ridder, D., Derks, M. F. L., Bosse, M., Megens, H. J. W. C. & Groenen, M., 3 Sep 2016.

Research output: Contribution to conferencePosterAcademic

The copy number variations at genes related to neuronal functions under selection in great tit

da Silva, V., Groenen, M., Bosse, M., Crooijmans, R. P. M. A., Laine, V. N., van Oers, K., Gienapp, P. & Visser, M. E., 4 Feb 2016.

Research output: Contribution to conferencePosterAcademic

Open Access
2015

Finding the genes which make great tits innovators

Laine, V., Gossmann, T. I., Schachtschneider, K. M., Madsen, O., Megens, H. J. W. C., Crooijmans, R. P. M. A., van Oers, K., Visser, M. E. & Groenen, M., 2015.

Research output: Contribution to conferencePosterAcademic

Genome Wide Analysis of Porcine miRNA Editing

Arya, A., Crooijmans, R. P. M. A., Giuffra, E., Groenen, M. & Madsen, O., Jan 2015.

Research output: Contribution to conferencePosterAcademic

Open Access

The genomics of avian breeding time – an ecologically relevant trait for adaptation to climate change

Gienapp, P., Calus, M. P. L., Laine, V., van Oers, K., Groenen, M., Slate, J. & Visser, M. E., Aug 2015.

Research output: Contribution to conferencePosterAcademic

2014

A small number of key ancestors provides high imputation accuracy in layer chicken

Heidaritabar, M., Vereijken, A., Calus, M. P. L., Groenen, M. & Bastiaansen, J. W. M., 2014.

Research output: Contribution to conferencePosterProfessional

2013

Fine mapping for androstenone level on pig chromosome 6

Hidalgo, A. M., Bastiaansen, J. W. M., Harlizius, B., Megens, H. J. W. C. & Groenen, M. A. M., 2013.

Research output: Contribution to conferencePosterProfessional

2012

genome diversity after genomic and pedigree BLUP selection in layer chicken

Heidaritabar, M., Bastiaansen, J. W. M. & Groenen, M. A. M., 2012.

Research output: Contribution to conferencePosterProfessional

2011

Detection of porcine imprinted genes through high-throughput cDNA-sequencing (RNA-seq)

Madsen, O., Crooijmans, R. P. M. A., Rund, L. A., Schook, L. B. & Groenen, M. A. M., 2011.

Research output: Contribution to conferencePosterProfessional

sequence analysis
swine
mammals
genes
genomic imprinting
2009

Finding selection footprints in the swine genome using massive parallel sequencing.

Amaral, A. J., Feretti, L., Megens, H. J. W. C., Crooijmans, R. P. M. A., Nie, H. & Groenen, M. A. M., 2009.

Research output: Contribution to conferencePosterProfessional

wild boars
swine
genome
swine breeds
olfactory receptors

Haplotype sharing at quantitative trait loci regions for pulmonary hypertension syndrome in chicken

Elferink, M. G., Bovenhuis, H., Vereijken, A., Closter, A. M., van As, P., Crooijmans, R. P. M. A. & Groenen, M. A. M., 2009.

Research output: Contribution to conferencePosterProfessional

Regional regulation of transcription in the chicken genome

Nie, H., Crooijmans, R. P. M. A., Bastiaansen, J. W. M., Megens, H. J. W. C. & Groenen, M. A. M., 2009.

Research output: Contribution to conferencePosterProfessional

2008

High throughput SNP discovery in unsequenced genomes using 2nd generation sequencing technology

Kerstens, H. H. D., Amaral, A. J., Megens, H. J. W. C., Hemmatian, K., Crooijmans, R. P. M. A., den Dunnen, J. T. & Groenen, M. A. M., 2008.

Research output: Contribution to conferencePosterProfessional