If you made any changes in Pure these will be visible here soon.

Fingerprint Dive into the research topics where Marnix Medema is active. These topic labels come from the works of this person. Together they form a unique fingerprint.

  • 20 Similar Researchers
Multigene Family Medicine & Life Sciences
Biological Products Medicine & Life Sciences
Genome Medicine & Life Sciences
Genes Chemical Compounds
Bacterial Genomes Medicine & Life Sciences
Biosynthetic Pathways Medicine & Life Sciences
Anti-Bacterial Agents Medicine & Life Sciences
Microbial Genome Medicine & Life Sciences

Network Recent external collaboration on country level. Dive into details by clicking on the dots.

Research Output 2011 2019

A genetical metabolomics approach for bioprospecting plant biosynthetic gene clusters

Witjes, L., Kooke, R., Van Der Hooft, J. J. J., De Vos, R. C. H., Keurentjes, J. J. B., Medema, M. H. & Nijveen, H., 2 Apr 2019, In : BMC Research Notes. 12, 1, 194.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Plant Genes
Metabolomics
Multigene Family
Genes
Metabolites
6 Citations (Scopus)

antiSMASH 5.0: updates to the secondary metabolite genome mining pipeline

Blin, K., Shaw, S., Steinke, K., Villebro, R., Ziemert, N., Lee, S. Y., Medema, M. H. & Weber, T., 2 Jul 2019, In : Nucleic acids research. 47, W1, p. W81-W87

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Bacterial Genomes
Multigene Family
Fungal Genome
Halogenated Diphenyl Ethers
Genome

Assessing specialized metabolite diversity in the cosmopolitan plant genus Euphorbia l.

Ernst, M., Nothias, L. F., van der Hooft, J. J. J., Silva, R. R., Saslis-Lagoudakis, H. C., Grace, O. M., Martinez-Swatson, K., Hassemer, G., Funez, L. A., Simonsen, H. T., Medema, M. H., Staerk, D., Nilsson, N., Lovato, P., Dorrestein, P. C. & Rønsted, N., 2 Jul 2019, In : Frontiers in Plant Science. 10, 846.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Euphorbia
metabolites
herbivores
metabolomics
Eurasia

Comprehensive mass spectrometry-guided phenotyping of plant specialized metabolites reveals metabolic diversity in the cosmopolitan plant family Rhamnaceae

Kang, K. B., Ernst, M., van der Hooft, J. J. J., da Silva, R. R., Park, J., Medema, M. H., Sung, S. H. & Dorrestein, P. C., 20 Feb 2019, In : The Plant Journal.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Rhamnaceae
Mass Spectrometry
mass spectrometry
metabolites
phenotype

Molnetenhancer: Enhanced molecular networks by integrating metabolome mining and annotation tools

Ernst, M., Kang, K. B., Caraballo-Rodríguez, A. M., Nothias, L. F., Wandy, J., Chen, C., Wang, M., Rogers, S., Medema, M. H., Dorrestein, P. C. & van der Hooft, J. J. J., 16 Jul 2019, In : Metabolites. 9, 7, 144.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Metabolomics
Metabolome
Computer Simulation
Workflow
Mass Spectrometry

Projects 2016 2021

Datasets

CCDC 1535309: Experimental Crystal Structure Determination

Huang, A. C. (Creator), Kautsar, S. (Creator), Hong, Y. J. (Creator), Medema, M. (Creator), Bond, A. D. (Creator), Tantillo, D. J. (Creator), Osbourn, A. (Creator), 28 Feb 2017

Dataset

CCDC 1535307: Experimental Crystal Structure Determination

Huang, A. C. (Creator), Kautsar, S. (Creator), Hong, Y. J. (Creator), Medema, M. (Creator), Bond, A. D. (Creator), Tantillo, D. J. (Creator), Osbourn, A. (Creator), 28 Feb 2017

Dataset

Genome-based exploration of the specialized metabolic capacities of the genus Rhodococcus

Ceniceros, A. (Creator), Dijkhuizen, L. (Creator), Petrusma, M. (Creator), Medema, M. (Creator), University of Groningen, 9 Aug 2017

Dataset

Rothia nasimurium strain:PT-32 Genome sequencing and assembly

Gaiser, R. A. (Creator), Medema, M. (Creator), Kleerebezem, M. (Creator), van Baarlen, P. (Creator), Wells, J. (Creator), Wageningen University, 3 Sep 2016

Dataset

CCDC 1535308: Experimental Crystal Structure Determination

Huang, A. C. (Creator), Kautsar, S. (Creator), Hong, Y. J. (Creator), Medema, M. (Creator), Bond, A. D. (Creator), Tantillo, D. J. (Creator), Osbourn, A. (Creator), 28 Feb 2017

Dataset