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Research Output 1991 2019

2019

Overexpression of the MYB29 transcription factor affects aliphatic glucosinolate synthesis in Brassica oleracea

Zuluaga, D. L., Graham, N. S., Klinder, A., van Ommen Kloeke, E. A., Marcotrigiano, A. R., Wagstaff, C., Verkerk, R., Sonnante, G. & Aarts, M. G. M., Sep 2019, In : Plant Molecular Biology. 101, 1-2, p. 65-79

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Glucosinolates
Brassica
glucosinolates
Brassica oleracea
Transcription Factors

Photosynthesis 2.0

Aarts, M. G. M., van Amerongen, H., Bock, R., Carmo-Silva, E., Croce, R., Finazzi, G., Foyer, C., Genty, B., Harbinson, J., Hibberd, J., Klein Lankhorst, R. M., Schranz, M. E., Struik, P. C. & Weijers, D., 2019, 5 p. Wageningen University and Research.

Research output: Other contributionPamphlet

Open Access

QTL and candidate genes associated with leaf anion concentrations in response to phosphate supply in Arabidopsis thaliana

El-Soda, M., Neris Moreira, C., Goredema-Matongera, N., Jamar, D., Koornneef, M. & Aarts, M. G. M., 18 Sep 2019, In : BMC Plant Biology. 19, 1, 410.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
anions
quantitative trait loci
Arabidopsis thaliana
phosphates
sulfates

Spatially-resolved localization and chemical speciation of nickel and zinc in Noccaea tymphaea and Bornmuellera emarginata

van der Ent, A., Spiers, K. M., Brueckner, D., Echevarria, G., Aarts, M. G. M. & Montargès-Pelletier, E., 11 Dec 2019, In : Metallomics. 11, 12, p. 2052-2065 14 p.

Research output: Contribution to journalArticleAcademicpeer-review

Chemical speciation
Nickel
Zinc
Seed
Seeds
1 Citation (Scopus)

Transcriptional effects of cadmium on iron homeostasis differ in calamine accessions of Noccaea caerulescens

Halimaa, P., Blande, D., Baltzi, E., Aarts, M. G. M., Granlund, L., Keinänen, M., Kärenlampi, S. O., Kozhevnikova, A. D., Peräniemi, S., Schat, H., Seregin, I. V., Tuomainen, M. & Tervahauta, A. I., Jan 2019, In : Plant Journal. 97, 2, p. 306-320

Research output: Contribution to journalArticleAcademicpeer-review

Cadmium
cadmium
homeostasis
Homeostasis
Iron
2018
2 Citations (Scopus)

Cadmium associates with oxalate in calcium oxalate crystals and competes with calcium for translocation to stems in the cadmium bioindicator Gomphrena claussenii

Pongrac, P., Serra, T. S., Castillo-Michel, H., Vogel-Mikuš, K., Arčon, I., Kelemen, M., Jenčič, B., Kavčič, A., Villafort Carvalho, M. T. & Aarts, M. G. M., 1 Nov 2018, In : Metallomics. 10, 11, p. 1576-1584

Research output: Contribution to journalArticleAcademicpeer-review

Calcium Oxalate
Oxalates
Biomarkers
Cadmium
Calcium
8 Citations (Scopus)

Converging phenomics and genomics to study natural variation in plant photosynthetic efficiency

van Bezouw, R. F. H. M., Keurentjes, J. J. B., Harbinson, J. & Aarts, M. G. M., 12 Dec 2018, In : The Plant Journal. 97, 1, p. 112-133

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Photosynthesis
Genomics
Plant Development
genomics
phenotype
6 Citations (Scopus)

Local fitness landscapes predict yeast evolutionary dynamics in directionally changing environments

Gorter, F. A., Aarts, M. G. M., Zwaan, B. J. & de Visser, J. A. G. M., 1 Jan 2018, In : Genetics. 208, 1, p. 307-322

Research output: Contribution to journalArticleAcademicpeer-review

Nickel
Yeasts
Metals
Cadmium
Zinc
13 Citations (Scopus)

LPCAT1 controls phosphate homeostasis in a zinc-dependent manner

Kisko, M., Bouain, N., Safi, A., Medici, A., Akkers, R. C., Secco, D., Fouret, G., Krouk, G., Aarts, M. G. M., Busch, W. & Rouached, H., 17 Feb 2018, In : eLife. 7, e32077.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Transferases
Phosphatidylcholines
Zinc
Homeostasis
Phosphates
2 Citations (Scopus)

Photosynthetic response to increased irradiance correlates to variation in transcriptional response of lipid-remodeling and heat-shock genes

van Rooijen, R., Harbinson, J. & Aarts, M. G. M., 1 Jul 2018, In : Plant Direct. 2, 7, e00069.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
heat shock
irradiance
heat stress
Shock
Hot Temperature
2017
13 Citations (Scopus)

De novo transcriptome assemblies of four accessions of the metal hyperaccumulator plant Noccaea caerulescens

Blande, D., Halimaa, P., Tervahauta, A. I., Aarts, M. G. M. & Kärenlampi, S. O., 2017, In : Scientific Data. 4, 160131.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
tolerance
Metals
Protein Sequence
nutrition
Tolerance
49 Citations (Scopus)

Genetic architecture of plant stress resistance: multi-trait genome-wide association mapping

Thoen, H. P. M., Davila Olivas, N. H., Kloth, K. J., Coolen, S., Huang, P., Aarts, M. G. M., Molenaar, J. A., Bakker, J., Bouwmeester, H. J., Broekgaarden, C., Bucher, J., Busscher-Lange, J., Cheng, X., van Dijk-Fradin, E. F., Jongsma, M. A., Julkowska, M. M., Keurentjes, J. J. B., Ligterink, W., Pieterse, C. M. J., Ruyter-Spira, C. P. & 13 others, Smant, G., van Schaik, C. C., van Wees, S. C. M., Visser, R. G. F., Voorrips, R. E., Vosman, B., Vreugdenhil, D., Warmerdam, S., Wiegers, G. L., van Heerwaarden, J., Kruijer, W. T., van Eeuwijk, F. A. & Dicke, M., 2017, In : New Phytologist. 213, 3, p. 1346-1362

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
plant stress
stress tolerance
chromosome mapping
Genome
single nucleotide polymorphism
13 Citations (Scopus)

Genome-wide identification, cloning and functional analysis of the Zinc/Iron-regulated transporter-like protein (ZIP) gene family in trifoliate orange (poncirus trifoliata L. Raf.)

Fu, X. Z., Zhou, X., Xing, F., Ling, L. L., Chun, C. P., Cao, L., Aarts, M. G. M. & Peng, L. Z., 2017, In : Frontiers in Plant Science. 8, 588.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Poncirus trifoliata
transporters
molecular cloning
zinc
iron
4 Citations (Scopus)

Natural variation in Arabidopsis thaliana reveals shoot ionome, biomass, and gene expression changes as biomarkers for zinc deficiency tolerance

Campos, A. C. A. L., Kruijer, W. T., Alexander, R., Akkers, R. C., Danku, J., Salt, D. E. & Aarts, M. G. M., 15 Jun 2017, In : Journal of Experimental Botany. 68, 13, p. 3643-3656

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Arabidopsis
Biomass
Zinc
biomarkers
Arabidopsis thaliana
9 Citations (Scopus)

Natural variation of YELLOW SEEDLING1 affects photosynthetic acclimation of Arabidopsis thaliana

Van Rooijen, R., Kruijer, W., Boesten, R., Van Eeuwijk, F. A., Harbinson, J. & Aarts, M. G. M., 1 Dec 2017, In : Nature Communications. 8, 1, 9 p., 1421.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
photosynthesis
Acclimatization
Photosynthesis
Arabidopsis
genes

Op weg naar gewassen die groeien als kool, of nog vele malen beter: Gewassen kunnen lichtenergie tot wel 50% beter benutten

Aarts, M., Harbinson, J., Heuvelink, E. & Kierkels, T., 2017, In : Onder Glas. 14, 11, p. 24-25

Research output: Contribution to journalArticleProfessional

2016
17 Citations (Scopus)

Disaggregating polyploidy, parental genome dosage and hybridity contributions to heterosis in Arabidopsis thaliana

Fort, A., Ryder, P., Mckeown, P. C., Wijnen, C., Aarts, M. G., Sulpice, R. & Spillane, C., 2016, In : New Phytologist. 209, 2, p. 590-599

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Hybrid Vigor
Polyploidy
heterosis
Arabidopsis
polyploidy
7 Citations (Scopus)

Dynamics of adaptation in experimental yeast populations exposed to gradual and abrupt change in heavy metal concentration

Gorter, F. A., Aarts, M. M. G., Zwaan, B. J. & de Visser, A., 2016, In : American Naturalist. 187, 1, p. 110-119

Research output: Contribution to journalArticleAcademicpeer-review

at-risk population
yeast
heavy metals
metals
heavy metal
22 Citations (Scopus)

Effect of prior drought and pathogen stress on Arabidopsis transcriptome changes to caterpillar herbivory

Davila Olivas, N. H., Coolen, S., Huang, P., Severing, E., van Verk, M. C., Hickman, R., Wittenberg, A. H. J., de Vos, M., Prins, M., van Loon, J. J. A., Aarts, M. G. M., van Wees, S. C. M., Pieterse, C. M. J. & Dicke, M., 2016, In : New Phytologist. 210, 4, p. 1344-1356

Research output: Contribution to journalArticleAcademicpeer-review

Herbivory
Droughts
Pieris rapae
Transcriptome
Arabidopsis
21 Citations (Scopus)

Expression of the Znt1 zinc transporter from the metal hyperaccumulator noccaea caerulescens confers enhanced zinc and cadmium tolerance and accumulation to arabidopsis thaliana

Lin, Y. F., Hassan, Z., Talukdar, S., Schat, H. & Aarts, M. G. M., 2016, In : PLoS ONE. 11, 3, e0149750.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
hyperaccumulators
Cadmium
Arabidopsis
transporters
Zinc
19 Citations (Scopus)

Multi-element bioimaging of Arabidopsis thaliana roots

Persson, D. P., Chen, A., Aarts, M. G. M., Salt, D. E., Schjoerring, J. K. & Husted, S., 2016, In : Plant Physiology. 172, 2, p. 835-847

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Arabidopsis
Arabidopsis thaliana
atomic absorption spectrometry
mutants
Plant Epidermis
35 Citations (Scopus)

Phenomics for photosynthesis, growth and reflectance in Arabidopsis thaliana reveals circadian and long-term fluctuations in heritability

Flood, P. J., Kruijer, W., Schnabel, S. K., Schoor, R., Jalink, H., Snel, J. F. H., Harbinson, J. & Aarts, M. G. M., 2016, In : Plant Methods. 12, 1, 14.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Photosynthesis
Arabidopsis
reflectance
heritability
Arabidopsis thaliana
50 Citations (Scopus)

Transcriptome dynamics of Arabidopsis during sequential biotic and abiotic stresses

Coolen, S., Proietti, S., Hickman, R., Davila Olivas, N. H., Huang, P., van Verk, M. C., van Pelt, J. A., Wittenberg, A. H. J., de Vos, M., Prins, M., van Loon, J. J. A., Aarts, M. G. M., Dicke, M., Pieterse, C. M. J. & van Wees, S. C. M., 2016, In : The Plant Journal. 86, 3, p. 249-267

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
biotic stress
Transcriptome
Arabidopsis
transcriptome
abiotic stress
7 Citations (Scopus)

Transcriptomic profiling of Arabidopsis gene expression in response to varying micronutrient zinc supply

Azevedo, H., Azinheiro, S. G., Muñoz-Mérida, A., Castro, P. H., Huettel, B., Aarts, M. M. G. & Assunção, A. G. L., 2016, In : Genomics Data. 7, p. 256-258

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Micronutrients
Gene Expression Profiling
Arabidopsis
Gene expression
Zinc
9 Citations (Scopus)

Whole-Genome Hitchhiking on an Organelle Mutation

Flood, P. J., van Heerwaarden, J., Becker, F., de Snoo, C. B., Harbinson, J. & Aarts, M. G. M., 2016, In : Current Biology. p. 1306-1311 26.

Research output: Contribution to journalArticleAcademicpeer-review

Organelles
organelles
Genes
organelle genome
Genome
2015
10 Citations (Scopus)

A transposon insertion in FLOWERING LOCUS T is associated with delayed flowering in Brassica rapa

Zhang, X., Meng, L., Liu, B., Hu, Y., Cheng, F., Liang, J., Aarts, M. G. M., Wang, X. & Wu, J., 1 Dec 2015, In : Plant Science. 241, p. 211-220 10 p.

Research output: Contribution to journalArticleAcademicpeer-review

Brassica rapa
transposons
Alleles
flowering
Quantitative Trait Loci
3 Citations (Scopus)

Biofumigation using a wild Brassica oleracea accession with high glucosinolate content affects beneficial soil

Zuluaga, D. L., Ommen Kloeke van, A. E. E., Verkerk, R., Röling, W. F. M., Ellers, J., Roelofs, D. & Aarts, M. G. M., 2015, In : Plant and Soil. 394, p. 155-163

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
biofumigation
glucosinolates
Brassica oleracea
soil invertebrates
soil
10 Citations (Scopus)

Gomphrena claussenii, a novel metal-hypertolerant bioindicator species, sequesters cadmium, but not zinc, in vacuolar oxalate crystals

Villafort Carvalho, M. T., Pongrac, P., Mumm, R., van Arkel, J., van Aelst, A., Jeromel, L., Vavpetic, P., Pelicon, P. & Aarts, M. G. M., 2015, In : New Phytologist. 208, 3, p. 763-775

Research output: Contribution to journalArticleAcademicpeer-review

Gomphrena
Oxalates
oxalates
Cadmium
indicator species
20 Citations (Scopus)

Isolation and identification of 4-a-rhamnosyloxy benzyl glucosinolate in Noccaea caerulescens showing intraspecific variation

de Graaf, R. M., Krosse, S., Swolfs, A. E. M., te Brinke, E., Prill, N., Leimu, R., van Galen, P. M., Wang, Y., Aarts, M. G. M. & van Dam, N. M., 2015, In : Phytochemistry. 110, p. 166-171

Research output: Contribution to journalArticleAcademicpeer-review

Glucosinolates
glucosinolates
Brassicaceae
Moringa
Moringaceae
32 Citations (Scopus)

Natural genetic variation for acclimation of photosynthetic light use efficiency to growth irradiance in Arabidopsis

van Rooijen, R., Aarts, M. G. M. & Harbinson, J., 2015, In : Plant Physiology. 167, 4, p. 1412-1429

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Acclimatization
Arabidopsis
acclimation
Light
light intensity
23 Citations (Scopus)

Quantitative trait loci and candidate genes underlying genotype by environment interaction in the response of Arabidopsis thaliana to drought

El-Soda, M., Kruijer, W., Malosetti, M., Koornneef, M. & Aarts, M. G. M., 2015, In : Plant, Cell & Environment. 38, 3, p. 585-599

Research output: Contribution to journalArticleAcademicpeer-review

Quantitative Trait Loci
Droughts
Arabidopsis
quantitative trait loci
Arabidopsis thaliana
2014
19 Citations (Scopus)

A comprehensive set of transcript sequences of the heavy metal hyperaccumulator Noccaea caerulescens

Lin, Y. F., Severing, E. I., te Lintel Hekkert, B., Schijlen, E. G. W. M. & Aarts, M. G. M., 2014, In : Frontiers in Plant Science. 5, 15 p., 261.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
hyperaccumulators
heavy metals
metals
Brassicaceae
unigenes
19 Citations (Scopus)

Comparative transcriptome analysis of the metal hyperaccumulator Noccaea caerulescens

Halimaa, P., Blande, D., Aarts, M. G. M., Tuomainen, M., Tervahauta, A. & Karenlampi, S., 2014, In : Frontiers in Plant Science. 5, 213.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
hyperaccumulators
transcriptomics
metals
RNA
Thlaspi arvense
16 Citations (Scopus)

Expression profiling reveals functionally redundant multiple-copy genes related to zinc, iron and cadmium responses in Brassica rapa

Li, J., Liu, B., Cheng, F., Wang, X., Aarts, M. G. M. & Wu, J., 2014, In : New Phytologist. 203, 1, p. 182-194

Research output: Contribution to journalArticleAcademicpeer-review

Brassica rapa
Cadmium
Zinc
cadmium
Iron
51 Citations (Scopus)

Gene Expression Differences between Noccaea caerulescens Ecotypes Help to Identify Candidate Genes for Metal Phytoremediation

Halimaa, P., Lin, Y. F., Ahonen, V. H., Blande, D., Clemens, S., Gyenesei, A., Haikio, E., Karenlampi, S. O., Laiho, A., Aarts, M. G. M., Pursiheimo, J. P., Schat, H., Schmidt, H., Tuomainen, M. H. & Tervahauta, A. I., 2014, In : Environmental Science and Technology. 48, 6, p. 3344-3353

Research output: Contribution to journalArticleAcademicpeer-review

ecotype
phytoremediation
Gene expression
gene expression
hyperaccumulation
17 Citations (Scopus)
Brassica rapa
genotype-environment interaction
Droughts
Quantitative Trait Loci
quantitative trait loci
101 Citations (Scopus)

Genotype x environment interaction QTL mapping in plants: lessons from Arabidopsis

El-Soda, M., Malosetti, M., Zwaan, B. J., Koornneef, M. & Aarts, M. G. M., 2014, In : Trends in Plant Science. 19, 6, p. 390-398

Research output: Contribution to journalArticleAcademicpeer-review

quantitative trait loci
Arabidopsis
botanical composition
genotype
plant breeding
4 Citations (Scopus)

Natural variation in phosphorylation of photosystem II proteins in Arabidopsis thaliana: is it caused by genetic variation in the STN kinases?

Flood, P. J., Yin, L., Herdean, A., Harbinson, J., Aarts, M. G. M. & Spetea, C., 2014, In : Philosophical Transactions of the Royal Society B. Biological sciences. 369, 1640, 9 p., 20130499.

Research output: Contribution to journalArticleAcademicpeer-review

Arabidopsis Proteins
Phosphorylation
Photosystem II Protein Complex
light harvesting complex
photosystem II

Nicotianamine Secretion for Zinc Excess Tolerance

Aarts, M. G. M., 2014, In : Plant Physiology. 166, 2, p. 751-752

Research output: Contribution to journalEditorialAcademicpeer-review

Zinc
zinc
secretion
Poaceae
uptake mechanisms
2013
9 Citations (Scopus)

Expression of HMA4 cDNAs of the zinc hyperaccumulator Noccaea caerulescens from endogenous NcHMA4 promoters does not complement the zinc-deficiency phenotype of the Arabidopsis thaliana hma2hma4 double mutant

Iqbal, M., Nawaz, I., Hassan, Z., Hakvoort, H. W. J., Bliek, M., Aarts, M. G. M. & Schat, H., 2013, In : Frontiers in Plant Science. 4, 404.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
hyperaccumulators
complement
Arabidopsis thaliana
zinc
promoter regions
6 Citations (Scopus)

Genetic Analysis of Health-Related Secondary Metabolites in a Brassica rapa Recombinant Inbred Line Population

Bagheri, H., El Soda, M., Kim, H. K., Fritsche, S., Jung, C. & Aarts, M. G. M., 2013, In : International Journal of Molecular Sciences. 14, 8, p. 15561-15577

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Glucosinolates
Brassica rapa
Tocopherols
metabolites
Quantitative Trait Loci
11 Citations (Scopus)

Gomphrena claussenii, the first South-American metallophyte species with indicator-like Zn and Cd accumulation and extreme metal tolerance

Tomaz Villafort Carvalho, M., Amaral, D. C., Guilherme, L. R. & Aarts, M. G. M., 2013, In : Frontiers in Plant Science. 4, 10 p., 180.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Gomphrena
metal tolerance
cadmium
zinc
shoots
10 Citations (Scopus)

Identification of seed-related QTL in Brassica rapa

Bagheri, H., Pino del Carpio, D., Hanhart, C. J., Bonnema, A. B., Keurentjes, J. J. B. & Aarts, M. G. M., 2013, In : Spanish Journal of Agricultural Research. 11, 4, p. 1085-1093

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Brassica rapa
quantitative trait loci
seed oils
seeds
lipid content
23 Citations (Scopus)

Model of how plants sense zinc deficiency

Assuncao, A. G. L., Persson, D. P., Husted, S., Schjorring, J. K., Alexander, R. D. & Aarts, M. G. M., 2013, In : Metallomics. 5, 9, p. 1110-1116

Research output: Contribution to journalArticleAcademicpeer-review

Nutrients
Zinc
Poisons
Food
Basic-Leucine Zipper Transcription Factors
359 Citations (Scopus)

Plant science: the key to preventing slow cadmium poisoning

Clemens, S., Aarts, M. G. M., Thomine, S. & Verbruggen, N., 2013, In : Trends in Plant Science. 18, 2, p. 92-99

Research output: Contribution to journalArticleAcademicpeer-review

poisoning
cadmium
margin of safety
plant organs
human population
2012
17 Citations (Scopus)

Genetic analysis of morphological traits in a new, versatile, rapid-cycling Brassica rapa recombinant inbred line population

Bagheri, H., El-Soda, M., van Oorschot, I., Hanhart, C. J., Bonnema, A. B., Jansen-van den Bosch, T., Mank, R., Keurentjes, J. J. B., Meng, L., Wu, J., Koornneef, M. & Aarts, M. G. M., 16 Aug 2012, In : Frontiers in Plant Science. 3, 12 p., 183.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Brassica rapa
inbred lines
genetic techniques and protocols
quantitative trait loci
Brassica rapa subsp. trilocularis
5 Citations (Scopus)

Genetic analysis of the effect of zinc deficiency on Arabidopsis growth and mineral concentrations

Ghandilyan, A., Kutman, U. B., Kutman, B. Y., Cakmak, I. & Aarts, M. G. M., 2012, In : Plant and Soil. 361, 1-2, p. 227-239

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
genetic analysis
mineral content
genetic techniques and protocols
zinc
Arabidopsis
29 Citations (Scopus)
Optical Imaging
Chlorophyll
Crops
Screening
Fluorescence
7 Citations (Scopus)

Signals of speciation within Arabidopsis thaliana in comparison with its relatives

Alcazar, R., Pecinka, A., Aarts, M. G. M., Fransz, P. F. & Koornneef, M., 2012, In : Current Opinion in Plant Biology. 15, 2, p. 205-211

Research output: Contribution to journalArticleAcademicpeer-review

Arabidopsis thaliana
Arabidopsis
reproductive isolation
molecular genetics
hybridization
273 Citations (Scopus)

The molecular mechanism of zinc and cadmium stress response in plants

Lin, Y. F. & Aarts, M. G. M., 2012, In : Cellular and Molecular Life Sciences. 69, 19, p. 3187-3206

Research output: Contribution to journalArticleAcademicpeer-review

Cadmium
Zinc
Metals
Reactive Oxygen Species
Heavy Metals