Research Output per year
Fingerprint Dive into the research topics where John van der Oost is active. These topic labels come from the works of this person. Together they form a unique fingerprint. If staff member(s) published prior to his/her WUR affiliation, it is possible that the publication overview, Fingerprint and network diagram are incomplete.
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Research Output
Adaptation and application of a two-plasmid inducible CRISPR-Cas9 system in Clostridium beijerinckii
Diallo, M., Hocq, R., Collas, F., Chartier, G., Wasels, F., Wijaya, H. S., Werten, M. W. T., Wolbert, E. J. H., Kengen, S. W. M., van der Oost, J., Ferreira, N. L. & López-Contreras, A. M., 1 Feb 2020, In : Methods. 172, p. 51-60 10 p.Research output: Contribution to journal › Article › Academic › peer-review
Open Access
2
Citations
(Scopus)
Evolutionary classification of CRISPR–Cas systems: a burst of class 2 and derived variants
Makarova, K. S., Wolf, Y. I., Iranzo, J., Shmakov, S. A., Alkhnbashi, O. S., Brouns, S. J. J., Charpentier, E., Cheng, D., Haft, D. H., Horvath, P., Moineau, S., Mojica, F. J. M., Scott, D., Shah, S. A., Siksnys, V., Terns, M. P., Venclovas, Č., White, M. F., Yakunin, A. F., Yan, W. & 6 others, , Feb 2020, In : Nature Reviews Microbiology. 18, p. 67-83 16 p.Research output: Contribution to journal › Article › Academic › peer-review
9
Citations
(Scopus)
First structural insights into CRISPR-Cas-guided DNA transposition
van der Oost, J. & Mougiakos, I., 3 Mar 2020, In : Cell Research. 30, p. 193-194Research output: Contribution to journal › Comment/Letter to the editor › Academic
Open Access
Good guide, bad guide: spacer sequence-dependent cleavage efficiency of Cas12a
Creutzburg, S. C. A., Wu, W., Mohanraju, P., Swartjes, T., Alkan, F., Gorodkin, J., Staals, R. H. J. & van der Oost, J., 6 Apr 2020, In : Nucleic acids research. 48, 6, p. 3228–3243 gkz1240.Research output: Contribution to journal › Article › Academic › peer-review
Open Access
1
Citation
(Scopus)
Highly specific enrichment of rare nucleic acid fractions using Thermus thermophilus argonaute with applications in cancer diagnostics
Song, J., Hegge, J. W., Mauk, M. G., Chen, J., Till, J. E., Bhagwat, N., Azink, L. T., Peng, J., Sen, M., Mays, J., Carpenter, E. L., van der Oost, J. & Bau, H. H., 28 Feb 2020, In : Nucleic acids research. 48, 4, p. e19Research output: Contribution to journal › Article › Academic › peer-review
Open Access
Datasets
Monascus ruber as cell factory for lactic acid production at low pH
Weusthuis, R. (Creator), Mars, A. (Creator), Springer, J. (Creator), Wolbert, E. (Creator), van der Wal, H. (Creator), de Vrije, T. (Creator), Levisson, M. (Creator), Leprince, A. (Creator), Houweling-Tan, G. B. N. (Creator), Moers, A. P. H. A. (Creator), Hendriks, S. (Creator), Mendes, O. (Creator), Griekspoor, Y. (Creator), Werten, M. W. T. (Creator), Schaap, P. (Creator), van der Oost, J. (Creator), Eggink, G. (Creator), Wageningen University, 29 Jun 2017
https://www.ebi.ac.uk/ena/data/view/PRJEB20852
Dataset
Thermus thermophilus HB27 WT vs HB27Δago RNAseq
Swarts, D. (Creator), Westra, E. (Creator), van der Oost, J. (Creator), Wageningen UR, 17 Feb 2014
https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52738
Dataset
RNA-targeting by the Type III-A CRISPR-Cas complex of Thermus thermophilus
Staals, R. (Creator), Zhu, Y. (Creator), Taylor, D. W. (Creator), Kornfeld, J. E. (Creator), Sharma, K. (Creator), Barendregt, A. (Creator), Koehorst, J. (Creator), Vlot, M. (Creator), Neupane, N. (Creator), Varossieau, K. (Creator), Sakamoto, K. (Creator), Suzuki, T. (Creator), Schaap, P. (Creator), Urlaub, H. (Creator), Heck, A. J. R. (Creator), Nogales, E. (Creator), Doudna, J. A. (Creator), Shinkai, A. (Creator), van der Oost, J. (Creator), Wageningen University, 9 Oct 2014
http://www.ebi.ac.uk/ena/data/view/PRJEB7461
Dataset
Effects of Argonaute on gene expression in Thermus thermophilus
Swarts, D. (Creator), Koehorst, J. (Creator), Westra, E. R. (Creator), Schaap, P. (Creator), van der Oost, J. (Creator), Wageningen University, 23 Apr 2015
https://www.ebi.ac.uk/ena/data/view/PRJEB8709
Dataset
Structural basis for guide RNA processing and seed-dependent DNA targeting and cleavage by CRISPR-Cas12a
Swarts, D. C. (Creator), van der Oost, J. (Creator), Jinek, M. (Creator), University of Zurich, 28 Apr 2017
Dataset
Press / Media
CRISPR-Cas kansrijke veredelingstool: bacterieel immuunsysteem als biotechnologisch gereedschap
1/11/19
1 Media contribution
Press/Media: Expert Comment
Discussion at the international conference crisprcon: Talking about CRISPR-Cas
J. van der Oost & L.O. Fresco
1/09/19
2 Media contributions
Press/Media: Public Engagement Activities
Hoe is complex leven ontstaan?
Thijs Ettema, W.M. de Vos & J. van der Oost
14/02/19
1 Media contribution
Press/Media: Research
100 jaar Wageningen
B.G. Heusinkveld, L.F.M. Marcelis, C.A. Kessler, G.W.W. Wamelink, C.A. Mücher, A.J.H. van Vliet, J. van der Oost, A.J.M. Timmermans & R.H. Wijffels
15/01/19
1 Media contribution
Press/Media: Expert Comment
Prizes
Spinoza Prize 2018
J. van der Oost (Recipient), 12 Sep 2018
Prize: Prize (including medals and awards)
Projects
The quest of the Argonautes - from myth to reality (ARGO)
Bouzetos, E., Staals, R. & van der Oost, J.
1/10/19 → …
Project: PhD
Building a synthetic cell (BaSyC).
Olivi, L., Claassens, N., Staals, R. & van der Oost, J.
1/09/19 → …
Project: PhD