Research output per year
Research output per year
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Dive into the research topics where John Bastiaansen is active. These topic labels come from the works of this person. Together they form a unique fingerprint.
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Collaborations and top research areas from the last five years
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From Pond Dynamics to Profitability: A Multispecies Bioeconomic Model for Tilapia-Shrimp Polyculture
Margarita, M. L., Komen, H., van den Burg, S. W. K., Meuwissen, M. P. M. & Bastiaansen, J. W. M., 4 Mar 2025, WIAS Annual Conference 2025. Wageningen University, p. 39-39Research output: Chapter in Book/Report/Conference proceeding › Abstract
Open Access -
Genetic analysis of swimming performance in rainbow trout (Oncorhynchus mykiss) using image traits derived from deep learning
Xue, Y., Palstra, A. P., Blonk, R., Mussgnug, R., Khan, H. A., Komen, H. & Bastiaansen, J. W. M., 15 Aug 2025, In: Aquaculture. 606, 742607.Research output: Contribution to journal › Article › Academic › peer-review
Open Access1 Citation (Scopus) -
Genotype-by-environment interaction in production traits of yellowtail kingfish (Seriola lalandi) reared in RAS and flow through systems
Jacob, N. K., Camara, M., Setiawan, A. & Bastiaansen, J. W. M., 15 Aug 2025, In: Aquaculture. 606, 742592.Research output: Contribution to journal › Article › Academic › peer-review
Open Access1 Citation (Scopus) -
Gill transcriptome profiling reveals adaptation to brackish water in a selectively bred hybrid tilapia (Oreochromis niloticus x O. aureus) strain
Yu, X., Ariñez, J. B., Setyawan, P., Wu, Z., Aththar, M. H. F., Camara, M., Fang, Y., Groenen, M. A. M., Komen, H., Bastiaansen, J. W. M. & Megens, H. J., 15 Sept 2025, In: Aquaculture Reports. 43, 13 p., 103001.Research output: Contribution to journal › Article › Academic › peer-review
Open Access -
Seaweed@WUR: Integrated Aquatic Food Systems
van den Burg, S. W. K., Roessink, I., Nauta, R. W., Bastiaansen, J. W. M. & Margarita, M. L., 2025Research output: Non-textual form › Digital or Visual Products
Open Access
Datasets
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Whole Genome SNP Discovery and Analysis of Genetic Diversity in Turkey (Meleagris gallopavo)
Aslam, M. L. (Creator), Bastiaansen, J. W. M. (Creator), Elferink, M. G. (Creator), Megens, H. J. W. C. (Creator), Crooijmans, R. P. M. A. (Creator), Blomberg, L. A. (Creator), Fleischer, R. C. (Creator), van Tassell, C. P. (Creator), Sonstegard, T. S. (Creator), Schroeder, S. G. (Creator), Groenen, M. (Creator) & Long, J. A. (Creator), Wageningen University, 4 Feb 2014
https://www.ncbi.nlm.nih.gov//bioproject/PRJNA237339
Dataset
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Genomic analysis of saline-tolerant Nile tilapia strain shows signatures of selection and introgression from blue tilapia (Oreochromis aureus)
Yu, X. (Creator), Setyawan, P. (Creator), Bastiaansen, J. W. M. (Creator), Liu, L. (Creator), Imron, I. (Creator), Groenen, M. A. M. (Creator), Komen, H. (Creator) & Megens, H. J. (Creator), Wageningen University & Research, 3 Jan 2023
https://www.ebi.ac.uk/ena/browser/view/PRJEB50266
Dataset
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Genome-wide association analysis of adaptation to oxygen stress in Nile tilapia (Oreochromis niloticus)
Yu, X. (Creator), Megens, H.-J. (Creator), Mengistu, S. B. (Creator), Bastiaansen, J. (Creator), Mulder, H. (Creator), Benzie, J. A. H. (Creator), Groenen, M. A. M. (Creator) & Komen, H. (Creator), Wageningen University & Research, 10 Jun 2021
DOI: 10.6084/m9.figshare.c.5460611
Dataset
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Hypermobility and short stature in Friesian horses is associated with an Ehlers-Danlos linkeropathy splice site mutation in B4GALT7
Leegwater, P. A. J. (Creator), Vos-Loohuis, M. (Creator), Ducro, B. J. (Creator), Boegheim, I. J. (Creator), Bastiaansen, J. W. M. (Creator), Dibbits, B. W. (Creator) & Schurink, A. (Creator), University Medical Center Utrecht (UMCU), 3 Jul 2016
http://www.ebi.ac.uk/ena/data/view/PRJEB13863
Dataset
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Data from: Artificial selection on introduced Asian haplotypes shaped the genetic architecture in European commercial pigs
Bosse, M. (Creator), Soares Lopes, M. (Creator), Madsen, O. (Creator), Megens, H.-J. (Creator), Crooijmans, R. (Creator), Frantz, L. (Creator), Harlizius, B. (Creator), Bastiaansen, J. (Creator) & Groenen, M. (Creator), Wageningen University & Research, 2 Dec 2015
DOI: 10.5061/dryad.g40f0
Dataset
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Individual re-identification of salmon using images and triplet loss Siamese network
Xue-Hijmans, Y. (Speaker), Bastiaansen, J. (Speaker), Kootstra, G. (Speaker) & Komen, H. (Speaker)
25 Apr 2024 → 26 Apr 2024Activity: Talk/presentation/lecture › Oral presentation › Academic
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Catch the wave: a workflow to implement images and artificial intelligence for selective breeding
Xue-Hijmans, Y. (Speaker), Palstra, A. (Contributor), Komen, H. (Contributor), Blonk, R. (Contributor) & Bastiaansen, J. (Contributor)
29 Aug 2024Activity: Talk/presentation/lecture › Oral presentation › Academic
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Can the student become the teacher? - The role of activation map on discovery of novel traits using convolutional neural network for prediction
Bastiaansen, J. (Speaker), Khan, H. A. (Speaker) & Komen, H. (Speaker)
20 Apr 2023 → 21 Apr 2023Activity: Talk/presentation/lecture › Oral presentation › Academic
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DISCOVER NOVEL TRAITS FOR BREEDING USING IMAGE ANALYSIS AND CLASS ACTIVATION MAPS IN FISH
Palstra, A. (Speaker), Blonk, R. (Speaker), Komen, H. (Speaker), Khan, H. A. (Speaker) & Bastiaansen, J. (Speaker)
18 Sept 2023 → 21 Sept 2023Activity: Talk/presentation/lecture › Oral presentation › Academic
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Genome editing in livestock breeding programs: opportunities and challenges
Mulder, H. A. (Speaker), Bastiaansen, J. W. M. (Contributor) & Bovenhuis, H. (Contributor)
19 Oct 2017Activity: Talk/presentation/lecture › Lecture/seminar/webinar › Other
Press/Media
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Gene-editing nog niet de kip met gouden eieren
Bovenhuis, H., Bastiaansen, J. W. M. & Mulder, H. A.
15/10/18
1 Media contribution
Press/Media: Research › Other
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Performance and robustness of tilapia-shrimp polyculture in Java
Margarita, M. (PhD candidate), Meuwissen, M. (Promotor) & Bastiaansen, J. (Co-promotor)
1/10/22 → …
Project: PhD
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Modelling the relationship of exterior traits with metabolic and health phenotypes using image analysis and big data methods to develop automated, non-invasive phenotyping of fish
Xue-Hijmans, Y. (PhD candidate), Bovenhuis, H. (Promotor) & Bastiaansen, J. (Co-promotor)
1/01/21 → …
Project: PhD
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Prospect for genomic selection of reproduction in salinity tolerant Tilapia
Aththar, F. (PhD candidate), Komen, H. (Promotor) & Bastiaansen, J. (Co-promotor)
12/08/19 → 2/12/24
Project: PhD
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Integrated breeding in aquaculture
Gulzari, B. (PhD candidate), Komen, H. (Promotor) & Bastiaansen, J. (Co-promotor)
1/01/19 → 2/10/23
Project: PhD
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Optimized design of a breeding program for saline tolerant tilapia
Setyawan, P. (PhD candidate), Komen, H. (Promotor), Bastiaansen, J. (Co-promotor) & Camara, M. (Co-promotor)
4/06/18 → 2/10/23
Project: PhD