Research output per year
Research output per year
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Dive into the research topics where John Bastiaansen is active. These topic labels come from the works of this person. Together they form a unique fingerprint.
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Collaborations and top research areas from the last five years
Recent external collaboration on country/territory level. Dive into details by clicking on the dots or
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From Pond Dynamics to Profitability: A Multispecies Bioeconomic Model for Tilapia-Shrimp Polyculture
Margarita, M. L., Komen, H., van den Burg, S. W. K., Meuwissen, M. P. M. & Bastiaansen, J. W. M., 4 Mar 2025, WIAS Annual Conference 2025. Wageningen University, p. 39-39Research output: Chapter in Book/Report/Conference proceeding › Abstract
Open Access -
Genetic analysis of swimming performance in rainbow trout (Oncorhynchus mykiss) using image traits derived from deep learning
Xue, Y., Palstra, A. P., Blonk, R., Mussgnug, R., Khan, H. A., Komen, H. & Bastiaansen, J. W. M., 15 Aug 2025, In: Aquaculture. 606, 742607.Research output: Contribution to journal › Article › Academic › peer-review
Open Access -
Genotype-by-environment interaction in production traits of yellowtail kingfish (Seriola lalandi) reared in RAS and flow through systems
Jacob, N. K., Camara, M., Setiawan, A. & Bastiaansen, J. W. M., 15 Aug 2025, In: Aquaculture. 606, 742592.Research output: Contribution to journal › Article › Academic › peer-review
Open Access -
Genetic Analysis of Swimming Performance in Rainbow Trout (Oncorhynchus Mykiss) Using Image Traits Derived from Deep Learning
Xue, Y., Palstra, A., Blonk, R., Mussgnug, R., Khan, H. A., Komen, H. & Bastiaansen, J., 28 May 2024, SSRN.Research output: Working paper › Preprint
Open Access -
Genome-wide association analyses reveal genotype-by-environment interactions of growth and organ weights in gilthead seabream (Sparus aurata)
Yu, X., Bastiaansen, J. W. M., Gulzari, B., Camara, M., Mulder, H. A., Komen, H., Groenen, M. A. M. & Megens, H. J., 30 Aug 2024, In: Aquaculture. 589, 740984.Research output: Contribution to journal › Article › Academic › peer-review
Open Access1 Citation (Scopus)
Datasets
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Genomic analysis of saline-tolerant Nile tilapia strain shows signatures of selection and introgression from blue tilapia (Oreochromis aureus)
Yu, X. (Creator), Setyawan, P. (Creator), Bastiaansen, J. W. M. (Creator), Liu, L. (Creator), Imron, I. (Creator), Groenen, M. A. M. (Creator), Komen, H. (Creator) & Megens, H. J. (Creator), Wageningen University & Research, 3 Jan 2023
https://www.ebi.ac.uk/ena/browser/view/PRJEB50266
Dataset
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Adaptive phenotypic and genetic variation in chickens: a landscape genomics approach
Kebede, F. (Creator), Derks, M. (Creator), Dessie, T. (Creator), Hanotte, O. (Creator), Moitinho de Almeida Pita Barros, C. (Creator), Crooijmans, R. (Creator), Komen, H. (Creator) & Bastiaansen, J. (Creator), Wageningen University & Research, 26 May 2022
Dataset
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Data from: Artificial selection on introduced Asian haplotypes shaped the genetic architecture in European commercial pigs
Bosse, M. (Creator), Soares Lopes, M. (Creator), Madsen, O. (Creator), Megens, H.-J. (Creator), Crooijmans, R. (Creator), Frantz, L. (Creator), Harlizius, B. (Creator), Bastiaansen, J. (Creator) & Groenen, M. (Creator), Wageningen University & Research, 2 Dec 2015
DOI: 10.5061/dryad.g40f0
Dataset
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Hypermobility and short stature in Friesian horses is associated with an Ehlers-Danlos linkeropathy splice site mutation in B4GALT7
Leegwater, P. A. J. (Creator), Vos-Loohuis, M. (Creator), Ducro, B. J. (Creator), Boegheim, I. J. (Creator), Bastiaansen, J. W. M. (Creator), Dibbits, B. W. (Creator) & Schurink, A. (Creator), University Medical Center Utrecht (UMCU), 3 Jul 2016
http://www.ebi.ac.uk/ena/data/view/PRJEB13863
Dataset
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Landscape genomics reveals regions associated with adaptive phenotypic and genetic variation in Ethiopian indigenous chickens
Kebede, F. (Creator), Derks, M. (Creator), Dessie, T. (Creator), Hanotte, O. (Creator), Moitinho de Almeida Pita Barros, C. (Creator), Crooijmans, R. (Creator), Komen, H. (Creator) & Bastiaansen, J. (Creator), Springer, 11 Sept 2024
DOI: 10.6084/m9.figshare.c.7127887
Dataset
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Catch the wave: a workflow to implement images and artificial intelligence for selective breeding
Xue-Hijmans, Y. (Speaker), Palstra, A. (Contributor), Komen, H. (Contributor), Blonk, R. (Contributor) & Bastiaansen, J. (Contributor)
29 Aug 2024Activity: Talk/presentation/lecture › Oral presentation › Academic
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Individual re-identification of salmon using images and triplet loss Siamese network
Xue-Hijmans, Y. (Speaker), Bastiaansen, J. (Speaker), Kootstra, G. (Speaker) & Komen, H. (Speaker)
25 Apr 2024 → 26 Apr 2024Activity: Talk/presentation/lecture › Oral presentation › Academic
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DISCOVER NOVEL TRAITS FOR BREEDING USING IMAGE ANALYSIS AND CLASS ACTIVATION MAPS IN FISH
Palstra, A. (Speaker), Blonk, R. (Speaker), Komen, H. (Speaker), Khan, H. A. (Speaker) & Bastiaansen, J. (Speaker)
18 Sept 2023 → 21 Sept 2023Activity: Talk/presentation/lecture › Oral presentation › Academic
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Can the student become the teacher? - The role of activation map on discovery of novel traits using convolutional neural network for prediction
Bastiaansen, J. (Speaker), Khan, H. A. (Speaker) & Komen, H. (Speaker)
20 Apr 2023 → 21 Apr 2023Activity: Talk/presentation/lecture › Oral presentation › Academic
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Genome editing in livestock breeding programs: opportunities and challenges
Mulder, H. A. (Speaker), Bastiaansen, J. W. M. (Contributor) & Bovenhuis, H. (Contributor)
19 Oct 2017Activity: Talk/presentation/lecture › Lecture/seminar/webinar › Other
Press/Media
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Gene-editing nog niet de kip met gouden eieren
Bovenhuis, H., Bastiaansen, J. W. M. & Mulder, H. A.
15/10/18
1 Media contribution
Press/Media: Research › Other
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Performance and robustness of tilapia-shrimp polyculture in Java
Margarita, M. (PhD candidate), Komen, H. (Promotor), Meuwissen, M. (Promotor) & Bastiaansen, J. (Co-promotor)
1/10/22 → …
Project: PhD
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Modelling the relationship of exterior traits with metabolic and health phenotypes using image analysis and big data methods to develop automated, non-invasive phenotyping of fish
Xue-Hijmans, Y. (PhD candidate), Komen, H. (Promotor), Bastiaansen, J. (Co-promotor) & Khan, H. A. (Other)
1/01/21 → …
Project: PhD
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Prospect for genomic selection of reproduction in salinity tolerant Tilapia
Aththar, F. (PhD candidate), Komen, H. (Promotor) & Bastiaansen, J. (Co-promotor)
12/08/19 → 2/12/24
Project: PhD
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Integrated breeding in aquaculture
Gulzari, B. (PhD candidate), Komen, H. (Promotor) & Bastiaansen, J. (Co-promotor)
1/01/19 → 2/10/23
Project: PhD
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Optimized design of a breeding program for saline tolerant tilapia
Setyawan, P. (PhD candidate), Komen, H. (Promotor), Bastiaansen, J. (Co-promotor) & Camara, M. (Co-promotor)
4/06/18 → 2/10/23
Project: PhD