Research output per year
Research output per year
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Dive into the research topics where Jasper Koehorst is active. These topic labels come from the works of this person. Together they form a unique fingerprint.
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Collaborations and top research areas from the last five years
Recent external collaboration on country/territory level. Dive into details by clicking on the dots or
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Implementation of a Clostridium luticellarii genome-scale model for upgrading syngas fermentations
Scott, W. T., Rockx, S. J., Mariën, Q., Regueira, A., Candry, P., Ganigué, R., Koehorst, J. J. & Schaap, P. J., 2025, In: Computational and Structural Biotechnology Journal. 27, p. 649 - 660Research output: Contribution to journal › Article › Academic › peer-review
Open Access -
Towards a machine learning operations (MLOps) soft sensor for real-time predictions in industrial-scale fed-batch fermentation
Metcalfe, B., Acosta-Pavas, J. C., Robles-Rodriguez, C. E., Georgakilas, G. K., Dalamagas, T., Aceves-Lara, C. A., Daboussi, F., Koehorst, J. J. & Corrales, D. C., Mar 2025, In: Computers and Chemical Engineering. 194, 13 p., 108991.Research output: Contribution to journal › Article › Academic › peer-review
1 Citation (Scopus) -
RAF-like protein kinases mediate a deeply conserved, rapid auxin response
Kuhn, A., Roosjen, M., Mutte, S., Dubey, S. M., Carrillo Carrasco, V. P., Boeren, S., Monzer, A., Koehorst, J., Kohchi, T., Nishihama, R., Fendrych, M., Sprakel, J., Friml, J. & Weijers, D., 4 Jan 2024, In: Cell. 187, 1, p. 130-148.e17Research output: Contribution to journal › Article › Academic › peer-review
Open Access35 Citations (Scopus) -
Author Correction: A protocol for adding knowledge to Wikidata: aligning resources on human coronaviruses
Waagmeester, A., Willighagen, E. L., Su, A. I., Kutmon, M., Gayo, J. E. L., Fernández-Álvarez, D., Groom, Q., Schaap, P. J., Verhagen, L. M. & Koehorst, J. J., 16 Nov 2023, In: BMC Biology. 21, 261.Research output: Contribution to journal › Comment/Letter to the editor › Academic
Open Access -
Digital twin maturity levels: a theoretical framework for defining capabilities and goals in the life and environmental sciences
Metcalfe, B., Boshuizen, H. C., Bulens, J. D. & Koehorst, J. J., 10 Aug 2023, In: F1000Research. 12, 961Research output: Contribution to journal › Article › Academic › peer-review
Open Access
Datasets
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Transcriptomics datasets for Clostridium autoethanogenum grown on CO in different environmental conditions
Diender, M. (Creator), Koehorst, J. J. (Creator) & Machado de Sousa, D. Z. (Creator), Wageningen University & Research, 25 Jan 2019
DOI: 10.4121/uuid:b6bd64a9-5bdb-4655-9829-520aa4600987
Dataset
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Expected and observed genotype complexity in prokaryotes: correlation between 16S-rRNA phylogeny and protein domain content
Koehorst, J. J. (Creator), Schaap, P. J. (Contributor) & Suarez Diez, M. (Contributor), Wageningen University & Research, 24 Oct 2018
DOI: 10.4121/uuid:37346f1e-f8cf-4112-ba4b-1223a3e4edda
Dataset
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Comparison of 432 Pseudomonas strains through integration of genomic, functional, metabolic and expression data
Koehorst, J. J. (Creator), van Dam, J. C. J. (Contributor), van Heck, R. G. A. (Contributor), Saccenti, E. (Contributor), Martins dos Santos, V. A. P. (Contributor), Suarez Diez, M. (Contributor) & Schaap, P. J. (Contributor), Wageningen University & Research, 25 Sept 2018
DOI: 10.4121/uuid:948c10fe-7ea5-47f3-bdb2-d5b0f908820b
Dataset
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Akkermansia muciniphila Genome sequencing and assembly
Ouwerkerk, J. P. (Creator), Tytgat, H. L. P. (Creator), Elzinga, J. (Creator), Koehorst, J. (Creator), Van den Abbeele, P. (Creator), Henrissat, B. (Creator), Gueimonde, M. (Creator), Cani, P. D. (Creator), Van de Wiele, T. (Creator), Belzer, C. (Creator) & de Vos, W. M. (Creator), Wageningen University & Research, 22 Jan 2019
https://www.ncbi.nlm.nih.gov/bioproject/270907
Dataset
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Conserved symbiosis between Akkermansia muciniphila and its mammalian host
Geerlings, S. (Creator), Ouwerkerk, J. (Creator), Koehorst, J. (Creator), Ritari, J. (Creator), Aalvink, S. (Creator), Stecher, B. (Creator), Schaap, P. (Creator), Paulin, L. (Creator), de Vos, W. (Creator) & Belzer, C. (Creator), Wageningen University, 28 Jul 2017
https://www.ebi.ac.uk/ena/browser/view/PRJEB21068
Dataset
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Integrative Metagenomic Analysis of Microbial Communities Utilizing Advanced Computational Methods
Ke, C. (PhD candidate), Suarez-Diez, M. (Promotor) & Koehorst, J. (Co-promotor)
15/11/24 → …
Project: PhD
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Computational Modeling & Digital Twins // Bioindustry 4.0
Martín Martín, I. (PhD candidate), Martins dos Santos, V. (Promotor), Suarez-Diez, M. (Promotor) & Koehorst, J. (Co-promotor)
1/04/24 → …
Project: PhD
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PIG-PARADIGM
Loomans, M. (PhD candidate), Suarez-Diez, M. (Promotor) & Koehorst, J. (Co-promotor)
1/08/23 → …
Project: PhD
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Improving outcome of necrotizing fasciitis: Elucidation of complex host and pathogen signatures that dictate severity of tissue infection.
Koehorst, J. (PhD candidate), Martins dos Santos, V. (Promotor), Saccenti, E. (Co-promotor) & Schaap, P. (Co-promotor)
1/10/12 → 25/01/19
Project: PhD