20052019
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Research Output 2005 2019

2019

Alternative Oxidase (AOX) Senses Stress Levels to Coordinate Auxin-Induced Reprogramming From Seed Germination to Somatic Embryogenesis—A Role Relevant for Seed Vigor Prediction and Plant Robustness

Mohanapriya, G., Bharadwaj, R., Noceda, C., Costa, J. H., Kumar, S. R., Sathishkumar, R., Thiers, K. L. L., Santos Macedo, E., Silva, S., Annicchiarico, P., Groot, S. P. C., Kodde, J., Kumari, A., Gupta, K. J. & Arnholdt-Schmitt, B., 20 Sep 2019, In : Frontiers in Plant Science. 10, 1134.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
vigor
auxins
seed germination
somatic embryogenesis
prediction

Seed maturation and post-harvest ripening negatively affect arabidopsis somatic embryogenesis

Wu, H., Chen, B., Fiers, M., Wróbel-Marek, J., Kodde, J., Groot, S. P. C., Angenent, G., Feng, H., Bentsink, L. & Boutilier, K., Oct 2019, In : Plant Cell, Tissue and Organ Culture. 139, 1, p. 17-27

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
seed maturation
somatic embryogenesis
ripening
Arabidopsis
embryo (plant)
2018

A seed treatment to prevent shoot apical meristem arrest in Brassica oleracea

de Jonge, J., Goffman, F. D., Kodde, J., Angenent, G. C. & Groot, S. P. C., 26 Jan 2018, In : Scientia Horticulturae. 228, p. 76-80

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
shoot meristems
apical meristems
Brassica oleracea
seed treatment
seeds
2 Citations (Scopus)

Rapid loss of seed viability in ex situ conserved wheat and barley at 4°C as compared to −20°C storage

van Treuren, R., Bas, N., Kodde, J., Groot, S. P. C. & Kik, C., 25 Jun 2018, In : Conservation Physiology. 6, 1, coy033.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Hordeum
barley
Triticum
Seeds
viability
1 Citation (Scopus)

Seed dormancy release accelerated by elevated partial pressure of oxygen is associated with DOG loci

Buijs, G., Kodde, J., Groot, S. P. C. & Bentsink, L., 27 Jun 2018, In : Journal of Experimental Botany. 69, 15, p. 3601-3608

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Plant Dormancy
Partial Pressure
seed dormancy
after-ripening
Oxygen
2016
13 Citations (Scopus)

Barley seed aging: Genetics behind the dry elevated pressure of oxygen aging and moist controlled deterioration

Nagel, M., Kodde, J., Pistrick, S., Mascher, M., Börner, A. & Groot, S. P. C., 2016, In : Frontiers in Plant Science. 7, 388.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
deterioration
barley
oxygen
seeds
quantitative trait loci
2 Citations (Scopus)

Low Temperature Affects Stem Cell Maintenance in Brassica oleracea Seedlings

de Jonge, J., Kodde, J., Severing, E. I., Bonnema, G., Angenent, G. C., Immink, R. G. H. & Groot, S. P. C., 2016, In : Frontiers in Plant Science. 7, 800.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Brassica oleracea
stem cells
blindness
seedlings
temperature
2015
23 Citations (Scopus)

Prolonging the longevity of ex situ conserved seeds by storage under anoxia

Groot, S. P. C., de Groot, L., Kodde, J. & van Treuren, R., 2015, In : Plant genetic resources: characterization and utilization. 13, 1, p. 18-26

Research output: Contribution to journalArticleAcademicpeer-review

hypoxia
Seeds
seeds
seed storage
deterioration
1 Citation (Scopus)

Quality improvement of aged cabbage (Brassica oleracea var. capitata) seeds using chlorophyll fluorescence sensor

Yadav, S. K., Jalink, H., Groot, S. P. C., Van Der Schoor, R., Dadlani, M. & Kodde, J., 25 Jun 2015, In : Scientia Horticulturae. 189, p. 81-85 5 p.

Research output: Contribution to journalArticleAcademicpeer-review

Brassica oleracea var. capitata
cabbage
fluorescence
chlorophyll
seeds
2014

Chlorophyll fluorescence and X-ray analyses to characterise and improve paddy rice seed quality

Costa, D. S., Kodde, J. & Groot, S. P. C., 2014, In : Seed Science and Technology. 42, 3, p. 449-453

Research output: Contribution to journalArticleAcademicpeer-review

seed quality
X-radiation
fluorescence
chlorophyll
rice
13 Citations (Scopus)

Regulatory Network of Secondary Metabolism in Brassica rapa: Insight into the Glucosinolate Pathway

Pino del Carpio, D., Kumar, R., Arends, D., Lin, K., de Vos, R. C. H., Muth, D., Kodde, J., Boutilier, K. A., Bucher, J., Wang, X., Jansen, R. C. & Bonnema, G., 2014, In : PLoS ONE. 9, 9, 11 p., e107123.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Secondary Metabolism
Glucosinolates
Brassica rapa
glucosinolates
Regulator Genes
2012
17 Citations (Scopus)

A fast ethanol assay to detect seed deterioration

Kodde, J., Buckley, W. T., de Groot, C. C., Retiere, M., Víquez Zamora, A. M. & Groot, S. P. C., 2012, In : Seed Science Research. 22, p. 55-62

Research output: Contribution to journalArticleAcademicpeer-review

ethanol production
deterioration
ethanol
assays
seeds
37 Citations (Scopus)

Seed storage at elevated partial pressure of oxygen, a fast method for analysing seed ageing under dry conditions

Groot, S. P. C., Surki, A. A., de Vos, R. C. H. & Kodde, J., 2012, In : Annals of Botany. 110, 6, p. 1149-1159

Research output: Contribution to journalArticleAcademicpeer-review

seed storage
oxygen
seeds
methodology
lettuce
2010
127 Citations (Scopus)

Germinator: A software package for high-throughput scoring and curve fitting of Arabidopsis seed germination

Joosen, R. V. L., Kodde, J., Willems, L. A. J., Ligterink, W., van der Plas, L. H. W. & Hilhorst, H. W. M., 2010, In : The Plant Journal. 62, 1, p. 148-159

Research output: Contribution to journalArticleAcademicpeer-review

Germination
Arabidopsis
Seeds
seed germination
Software

The Germinator automated germination scoring system

Joosen, R. V. L., Kodde, J., Willems, L. A. J., Ligterink, W. & Hilhorst, H. W. M., 2010, In : Seed Testing International. 140, p. 4-8

Research output: Contribution to journalComment/Letter to the editorAcademic

Open Access
germination
seeds
Biological Sciences
seed development
microscopes

Verbetering detecteerbaarheid van Clavibacter in biologisch tomatenzaad

van der Wolf, J. M., van der Zouwen, P. S., Kodde, J., Groot, S. P. C., Jalink, H. & Hiddink, G., 2010, Wageningen: Plant Research International. 5 p. (PRI Onderzoekverslag)

Research output: Book/ReportReportProfessional

2009

Een alcoholtest voor zwakke zaden

Groot, S. P. C. & Kodde, J., 2009.

Research output: Contribution to conferencePosterProfessional

Open Access
2008

Molecular dissection of seed priming treatments

Ligterink, W., Kodde, J., Lammers, M., Willems, L., de Maagd, R. A. & Hilhorst, H. W. M., 2008, 9th ISSS Conference on Seed Biology, Olsztyn, Poland, 6 - 11 August, 2008. Vol. 5. p. 80

Research output: Chapter in Book/Report/Conference proceedingAbstractAcademic

2007

Alterations in gene expression and DNA during loss and re-establishment of desiccation-tolerance in germinating and germinated Medicago truncatula seeds

Faria, J. M. R., Lammers, M., Ligterink, W., Kodde, J. & Hilhorst, H. W. M., 2007, Seeds, Biology, Developments and Ecology. Adkins, S. W., Ashmore, S. & Navie, S. C. (eds.). Wallingford: CABI, p. 50-56 496 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Molecular dissection of priming

Ligterink, W., Kodde, J., Lammers, M., de Maagd, R. A. & Hilhorst, H. W. M., 2007.

Research output: Contribution to conferenceAbstractAcademic

Molecular dissection of seed priming treatments

Ligterink, W., Kodde, J., Lammers, M., de Maagd, R. A. & Hilhorst, H. W. M., 2007.

Research output: Contribution to conferenceAbstractAcademic

11 Citations (Scopus)

Stress inducible gene expression and its impact on seed and plant performance. A microarray approach

Ligterink, W., Kodde, J., Lammers, M., Dassen, J. H. A., van der Geest, A. H. M., de Maagd, R. A. & Hilhorst, H. W. M., 2007, Seeds, Biology, Developments and Ecology. Adkins, S. W., Ashmore, S. & Navie, S. C. (eds.). Wallingford, UK: CABI, p. 139-148 496 p.

Research output: Chapter in Book/Report/Conference proceedingChapterAcademicpeer-review

126 Citations (Scopus)
seed maturation
Brassica
Brassica oleracea
Germination
stress tolerance
85 Citations (Scopus)

Genomic cloning and linkage mapping of the Mal d 1 (PR-10) gene family in apple (Malus domestica)

Gao Zhongshan, van de Weg, W. E., Schaart, J. G., Schouten, H. J., Tran, D. H., Kodde, L. P., van der Meer, I. M., van der Geest, A. H. M., Kodde, J., Breiteneder, H., Hoffmann-Sommergruber, K., Bosch, H. J. & Gilissen, L. J. W. J., 2005, In : Theoretical and Applied Genetics. 111, 1, p. 171-183

Research output: Contribution to journalArticleAcademicpeer-review

Chromosome Mapping
Malus
Malus domestica
chromosome mapping
Organism Cloning

Optimization of seed priming by the seed conditioner

Kodde, J., Lammers, M., Ligterink, W., Dassen, J. H. A., van der Geest, L., de Maagd, R. A. & Hilhorst, H. W. M., 2005.

Research output: Contribution to conferenceAbstractAcademic