1988 …2020

Research output per year

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Research Output

Natural variation in Monoamine Oxidase A modulates RAS/MAPK pathway activity during C. elegans vulval development

Schmid, T., Snoek, L. B., Rodriguez, M., van der Bent, L., Despot Slade, E., Kammenga, J. E. & Hajnal, A., 2013, Proceedings of the 5th EMBO meeting, 21-24 September 2013, Amsterdam, the Netherlands. p. 49-49

Research output: Chapter in Book/Report/Conference proceedingAbstract

Natural Variation in Stress Response in C. elegans using a Novel Recombinant Inbred Panel

Stastna, J., Snoek, L. B., Riksen, J. A. G., Vujakovic, A., Schulenburg, H., Kammenga, J. E. & Harvey, S. C., Jul 2016.

Research output: Contribution to conferenceAbstractAcademic

Natural variation of genome-wide transcription underlying longevity and stress response in C. Elegans

Rodriguez Sanchez, M., Snoek, L. B., Riksen, J. A. G. & Kammenga, J. E., 2010, Scientific Conference on Evolutionary Biology of Caenorhabditis and other Nematodes, Hinxton, Cambridge, UK, 5-8 June 2010. p. P49-P49

Research output: Chapter in Book/Report/Conference proceedingAbstract

Natural variation of the dynamics of global gene transcription: regulation in aging worms

Viñuela Rodriguez, A., Snoek, L. B., Riksen, J. A. G. & Kammenga, J. E., 2009, Program and abstracts of the 17th International C. Elegans meeting, University of California, Los Angeles, June 24-28, 2009. Los Angeles, p. 355 (832A)

Research output: Chapter in Book/Report/Conference proceedingAbstract

Open Access

Natural variation of the dynamics of global gene transcription: regulation in aging worms

Viñuela Rodriguez, A., Snoek, L. B., Riksen, J. A. G. & Kammenga, J. E., 2009, European Conference on Complex Systems' 09, Warwick, UK, 21-25 September 2009. Warwick, p. 144-144

Research output: Chapter in Book/Report/Conference proceedingAbstract

Open Access

Natural variation of the dynamics of global gene transcription regulation in aging worms

Viñuela Rodriguez, A., Snoek, L. B., Riksen, J. A. G. & Kammenga, J. E., 2009, Abstract book of the 1 symposium on Systems Genetics: from man to microbe, from genotype to phenotype, Groningen, The Netherlands, 1-2 October 2009. p. 56

Research output: Chapter in Book/Report/Conference proceedingAbstract

Natural variation of the dynamics of global gene transcription regulation in aging worms

Viñuela Rodriguez, A., Snoek, L. B., Riksen, J. A. G. & Kammenga, J. E., 2010.

Research output: Contribution to conferencePosterProfessional

Natural variation reveals the autophagy gene unc-51 as a key connection between sex and death in C. Elegans

Snoek, L. B., Viñuela Rodriguez, A., Gutteling, E. W., Riksen, J. A. G. & Kammenga, J. E., 2009, Program and abstracts of the 17th International C. Elegans meeting, University of California, Los Angeles, June 24-28, 2009. Los Angeles, p. 184 (328A)

Research output: Chapter in Book/Report/Conference proceedingAbstract

Open Access

Nematicidal activity of plant extracts against the root-knot nematode, Meloidogyne incognita

Wiratno, Taniwiryono, D., van den Berg, J. H. J., Riksen, J. A. G., Rietjens, I., Djiwanti, S. R., Kammenga, J. E. & Murk, A. J., 2009, In : The Open Natural Products Journal. 2, p. 77-85

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Nematode endogenous small RNA pathways

Hoogstrate, S. W., Volkers, R. J. M., Sterken, M. G., Kammenga, J. E. & Snoek, L. B., 2014, In : Worm. 3, 1, 10 p., e28234.

Research output: Contribution to journalArticleAcademicpeer-review

Next-gen genetical genomics; RNA-sequencing of a new multi-parent recombinant inbred line population of Caenorhabditis elegans

Snoek, L. B., Volkers, R. J. M., Nijveen, H., Sterken, M. G., Riksen, J. A. G., Braeckman, B., Schulenburg, H. J. G. & Kammenga, J. E., 2014, Proceedings of Evolutionary Biology of Caenorhabditis and other Nematodes. p. 77-77

Research output: Chapter in Book/Report/Conference proceedingAbstractAcademic

Next-gen transcriptiome sequencing reveals polymorphisms and expression differences between two C.elegans wildtype isolates, CB4856 and N2

Snoek, L. B., Riksen, J. A. G. & Kammenga, J. E., 2010, Scientific Conference on Evolutionary Biology of Caenorhabditis and other Nematodes, Hinxton, Cambridge, UK, 5-8 June 2010. p. P67-P67

Research output: Chapter in Book/Report/Conference proceedingAbstract

On predicting regulatory genes by analysis of functional networks in C. elegans

Valba, O. V., Nechaev, S., Sterken, M. G., Snoek, L. B., Kammenga, J. E. & Vasieva, O., 2015, In : BioData Mining. 8, 1, 16 p., 33.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Ontwikkelingen op het gebied van de mengseltoxiciteit in het terrestrische milieu.

Kammenga, J. E., 1998, Symposium Mengseltoxiciteit, Ned. Ver. Toxicol., Amserdam, The Netherlands (1998).

Research output: Chapter in Book/Report/Conference proceedingAbstract

Ontwikkeling van een toxiciteitstoets met vrijlevende nematoden.

Kammenga, J. E., 1990, Abstract 3e Nat. Symp. Speerpuntprogramma Bodemonderzoek. p. 3

Research output: Chapter in Book/Report/Conference proceedingAbstract

Opposite immune responses in Caenorhabditis elegans caused by a single gene, the neuropeptide receptor gene npr-1

Nakad, R., Snoek, L. B., Yang, W., Dierking, K., Rosenstiel, P. C., Kammenga, J. E. & Schulenburg, H., 2015, Proceedings of the 20th International C. elegans Meeting. Los Angeles, USA, p. 62-62

Research output: Chapter in Book/Report/Conference proceedingAbstract

Orsay Virus infection dynamics in Caenorhabditis elegans

Sterken, M. G., Snoek, L. B., Bosman, K., Daamen, J., Riksen, J. A. G., Bakker, J., Pijlman, G. P. & Kammenga, J. E., 2013, Proceedings of the 5th EMBO meeting 2013, 21-24 September 2013, Amsterdam, the Netherlands. p. 113-114

Research output: Chapter in Book/Report/Conference proceedingAbstract

Orsay virus replication kinetics in C. elegans strain Bristol N2

Sterken, M. G., Bosman, K., Snoek, L. B., Daamen, J., Riksen, J. A. G., Bakker, J., Pijlman, G. P. & Kammenga, J. E., 2013, Proceedings of the 19th International C.elegans Meeting, 26-30 June 2013, Los Angeles, California, USA. p. 341-341

Research output: Chapter in Book/Report/Conference proceedingAbstract

60 Citations (Scopus)

Pedological Characterisation of Sites Along a Transect from a Primary Cadmium/ Lead/ Zinc Smelting Works

Filzek, P. D. B., Spurgeon, D. J., Broll, G. E., Svendsen, C., Hankard, P. K., Kammenga, J. E., Donker, M. H. & Weeks, J. M., 2004, In : Ecotoxicology. 13, p. 725-737

Research output: Contribution to journalArticleAcademicpeer-review

46 Citations (Scopus)

Phenotypic plasticity and fitness as parameters in ecotoxicology.

Kammenga, J., 1996, Abstract 5th SECOTOX Conf., Metz, France (1996).

Research output: Chapter in Book/Report/Conference proceedingAbstract

Open Access

Physiological modes of action of toxic chemicals in the nematode acrobeloides nanus

Alda Alvarez, O., Jager, T., Redondo, E. M. & Kammenga, J. E., 2006, In : Environmental Toxicology and Chemistry. 25, 12, p. 3230-3237

Research output: Contribution to journalArticleAcademicpeer-review

54 Citations (Scopus)

Polymorphic regions and genes affecting gene transcription regulation of stress response and prolonged lifespan

Sterken, M. G., Snoek, L. B., Bevers, R. P. J., Volkers, R. J. M., van 't Hof, A., Brenchley, R., van Cleef, E., Bartels, R., Laven, Y., Riksen, J. A. G., Valba, O., Chavali, S., Lang, B., Francesconi, M., Bot, J., Nechaev, S., Vasieva, O., Babu, M., Lehner, B., Cossins, A. & 1 others, Kammenga, J. E., 2014, Proceedings of Evolutionary Biology of Caenorhabditis and other Nematodes. p. 33-33

Research output: Chapter in Book/Report/Conference proceedingAbstract

Population complexity trumps model complexity in understanding trait variation

Sterken, M. G., Snoek, L. B., Bevers, R. P. J., Volkers, J. M., Riksen, J. A. G. & Kammenga, J. E., 16 May 2018.

Research output: Contribution to conferencePosterAcademic

Potential and limitations of soil invertebrate biomarkers : final report of the EU BIOPRINT field project

Kammenga, J. E., 2001, Abstract book of the 11th Annual meeting of SETAC Europe 6-10 May 2001, Madrid, Spain. From basic science to decision-making: "The environmental Odyssey" : Madrid, 2001. Brussels, Belgium: SETAC Europe, p. 46-47

Research output: Chapter in Book/Report/Conference proceedingAbstract

Predicting individual differences in viral susceptibility caused by natural genetic variation within species

van Sluijs, L., Sterken, M. G., Wang, Y. A., Ritmahan, W., Gultom, M., Pankok, F., Blokhina, T., Riksen, J. A. G., Volkers, J. M., Snoek, L. B., Pijlman, G. P. & Kammenga, J. E., 17 Jun 2018.

Research output: Contribution to conferencePoster

Progress Report 1997 of BIOPRINT II. Second Technical Report, Detailed report of the contractors

Kammenga, J. E. & Arts, M. S. J., 1997, Denemarken: Ministry of Environment and Energy. 36 p.

Research output: Book/ReportReportProfessional

Progress report of EC-project SECOFASE, Second technical report.

Wiles, J. A., Kammenga, J. E. & L_kke, H., 1994, Unknown Publisher. 94 p.

Research output: Book/ReportReportAcademic

QTLs and Implications for Network Analysis

Snoek, L. B., Sterken, M. G., Bevers, R. P. J., Ashelford, K., van 't Hoff, C. A., Vasieva, O., Cossins, A. R. & Kammenga, J. E., 2011, Abstract Book of the 12th International Conference on Systems Biology, Heidelberg/Mannheim, Germany, 28 August - 1 September 2011. Heidelberg: IBM System Storage Solutions, p. 119-119

Research output: Chapter in Book/Report/Conference proceedingAbstractAcademic

Quantifying copper and cadmium impacts on intrinsic rate of population increase in the terrestrial oligochaete lumbricus rubellus

Spurgeon, D. J., Svendsen, C., Weeks, J. M., Hankard, P. K., Stubberud, H. E. & Kammenga, J. E., 2003, In : Environmental Toxicology and Chemistry. 22, 7, p. 1465-1472

Research output: Contribution to journalArticleAcademicpeer-review

38 Citations (Scopus)

Quantifying resilience of humans and other animals

Scheffer, M., Bolhuis, J. E., Borsboom, D., Buchman, T. G., Gijzel, S. M. W., Goulson, D., Kammenga, J. E., Kemp, B., van de Leemput, I. A., Levin, S., Martin, C. M., Melis, R. J. F., van Nes, E. H., Romero, L. M. & Olde Rikkert, M. G. M., 20 Nov 2018, In : Proceedings of the National Academy of Sciences of the United States of America. 115, 47, p. 11883-11890

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
28 Citations (Scopus)

Quantitative pathway analysis of natural variation in complex disease signaling in C. elegans

Zheng, C., Li, X., Laczko, E., Elvin, M., Poulin, G., Snoek, L. B., Kammenga, J. E., Jovanovic, M., Schrimpf, S. & Hengartner, M., 2011.

Research output: Contribution to conferencePosterProfessional

Rapid adaptive divergence of life-history traits in response to abiotic stress within a natural population of a parthenogenetic nematode

Doroszuk, A., Wojewodzic, M. W. & Kammenga, J. E., 2006, In : Proceedings of the Royal Society. B: Biological Sciences. 273, 1601, p. 2611-2618

Research output: Contribution to journalArticleAcademicpeer-review

11 Citations (Scopus)

Rapid Divergence of Genetic Variance-Covariance Matrix within a Natural Population

Doroszuk, A., Wojewodzic, M. W., Gort, G. & Kammenga, J. E., 2008, In : American Naturalist. 171, 3, p. 291-304

Research output: Contribution to journalArticleAcademicpeer-review

37 Citations (Scopus)

Rapid evolution of G matrices in nematode field populations

Doroszuk, A., Wojewodzic, M. W. & Kammenga, J. E., 2005, 10th Congress of European Society for Evolutionary Biology, Krakow, Poland, 15-20 August 2005. Krakow, Poland, p. 261-261

Research output: Chapter in Book/Report/Conference proceedingAbstract

Rapid evolution of G matrices in nematode field populations under stress

Doroszuk, A., Wojewodzic, M. W. & Kammenga, J. E., 2005.

Research output: Contribution to conferencePosterProfessional

Ras/MAPK Modifier Loci Revealed by eQTL in Caenorhabditis elegans

Sterken, M. G., van Bemmelen-van der Plaat, L., Riksen, J. A., Rodriguez, M., Schmid, T., Hajnal, A., Kammenga, J. E. & Snoek, B. L., 2017, In : G3 : Genes Genomes Genetics. 7, 9, p. 3185-3193

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
6 Citations (Scopus)

Reaction norms for life-history traits as the basis for the evaluation of critical effect levels of toxicants.

Kammenga, J. E., Korthals, G. W., Bongers, T. & Bakker, J., 1997, Ecol. Risk assessment of contaminants in soil. Van Straalen, N. M. & Loekke, H. (eds.). London: Chapman & Hall, p. 293-304

Research output: Chapter in Book/Report/Conference proceedingChapter

Reactions norms for life-history traits as the basis for the evaluation of criticaleffect levels.

Kammenga, J. E., 1994, Int. Workshop Soil ecotoxicological risk assessment systems. Papendal, The Netherlands (1994).

Research output: Chapter in Book/Report/Conference proceedingAbstract

reGenotyper: Detecting mislabeled samples in genetic data

Zych, K., Snoek, B. L., Elvin, M., Rodriguez, M., Van Der Velde, K. J., Arends, D., Westra, H-J., Swertz, M. A., Poulin, G., Kammenga, J. E., Breitling, R., Jansen, R. C. & Li, Y., 2017, In : PLoS ONE. 12, 2, e0171324.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
2 Citations (Scopus)

Remarkably divergent regions punctuate the genome assembly of the Caenorhabditis elegans Hawaiian strain CB4856

Thompson, O. A., Snoek, L. B., Nijveen, H., Sterken, M. G., Volkers, R. J. M., Brenchley, R., van 't Hof, A., Bevers, R. P. J., Cossins, A. R., Yanai, I., Hajnal, A., Schmid, T., Perkins, J. D., Spencer, D., Kruglyak, L., Andersen, E. C., Moerman, D. G., Hillier, L. W., Kammenga, J. E. & Waterston, R. H., 2015, In : Genetics. 200, 3, p. 975-989

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
43 Citations (Scopus)

Response of secondary production and its components to multiple stressors in nematode field populations.

Doroszuk, A., te Brake, E., Crespo-Gonzalez, D. & Kammenga, J. E., 2007, In : Journal of Applied Ecology. 44, 2, p. 446-455

Research output: Contribution to journalArticleAcademicpeer-review

15 Citations (Scopus)

Responses to stress of Caenorhabditis elegans populations with different reproductive strategies

Alda Alvarez, O., Jager, T., Kooijman, S. A. L. M. & Kammenga, J. E., 2005, In : Functional Ecology. 19, 4, p. 656-664

Research output: Contribution to journalArticleAcademicpeer-review

33 Citations (Scopus)

Rictor/TORC2 mediates gut-to-brain signaling in the regulation of phenotypic plasticity in C. elegans

O’Donnell, M. P., Chao, P-H., Kammenga, J. E. & Sengupta, P., 7 Feb 2018, In : Plos Genetics. 14, 2, e1007213.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
8 Citations (Scopus)

Rictor limits temperature-dependent dauer formation by controlling intestine-neuron signaling

O'Donnell, M., Kammenga, J. E. & Sengupta, P., 2015.

Research output: Contribution to conferencePosterProfessional

Selection and gene flow shape niche-associated variation in pheromone response

Lee, D., Zdraljevic, S., Cook, D. E., Frézal, L., Hsu, J-C., Sterken, M. G., Riksen, J. A. G., Wang, J., Kammenga, J. E., Braendle, C., Félix, M-A., Schroeder, F. C. & Andersen, E. C., 1 Oct 2019, In : Nature Ecology & Evolution. 3, p. 1455-1463

Research output: Contribution to journalArticleAcademicpeer-review

1 Citation (Scopus)

Setting safe standards for toxicants using stochastic diffusion models for species extinction

Kammenga, J. E., 1997, Abstract book: SETAC Europe, 7th congress, Amsterdam, The Netherlands 1997. - [S.l.] : [s.n.], 1997. p. 115

Research output: Chapter in Book/Report/Conference proceedingAbstract