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Research Output 1988 2020

63 Citations (Scopus)

A Caenorhabditis elegans Wild Type Defies the Temperature-Size Rule Owing to a Single Nucleotide Polymorphism in tra-3

Kammenga, J. E., Doroszuk, A., Riksen, J. A. G., Hazendonk, E., Spiridon, L. N., Petrescu, A. J., Tijsterman, M., Plasterk, R. H. A. & Bakker, J., 2007, In : Plos Genetics. 3, 3, e34.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Caenorhabditis elegans
single nucleotide polymorphism
Single Nucleotide Polymorphism
polymorphism
Temperature

Acute stress resistance, DR and Lifespan in a multi-parent recombinant inbred line panel

Stastna, J., Snoek, L. B., Volkers, J. M., Riksen, J. A. G., Vujakovic, A., Schulenburg, H., Kammenga, J. E. & Harvey, S., 2015.

Research output: Contribution to conferencePosterProfessional

Adaptation to multiple stressors through stress-specific mechnisms in natural populations

Doroszuk, A., Garcia-Gallego, R. & Kammenga, J. E., 2007, XI Congress European Society for Evolutionary Biology, 20-25 August, 2007, Uppsala, Sweden. Uppsala, p. 48

Research output: Chapter in Book/Report/Conference proceedingAbstract

Open Access

Adaptive divergence of nematode populations as a response to long term stress

Doroszuk, A., Wojewodzic, M., te Brake, E. & Kammenga, J. E., 2004, Netherlands Scientific Symposium Soil & Water, Zeist, 2-3 June 2004. Zeist, p. 36-38

Research output: Chapter in Book/Report/Conference proceedingAbstract

A decrease in movement at a defined moment in life predicts death

Jovic, K., Bartels, R., Volkers, J. M., Sterken, M. G., Snoek, L. B. & Kammenga, J. E., 2015.

Research output: Contribution to conferencePoster

A demographic interpretation of mixture toxicity

Jonker, M. J. & Kammenga, J. E., 2002, Changes in Environmental Risk Assessment and Modelling: Linking Basic and Applied Research : SETAC Europe 12th Annual Meeting, 12-16 May 2002, Vienna, Austria. - Belgium : [s.n.], 2002. p. 238

Research output: Chapter in Book/Report/Conference proceedingAbstract

21 Citations (Scopus)

A fitness assay for comparing RNAi effects across multiple C. elegans genotypes

Elvin, M., Snoek, L. B., Frejno, M., Klemstein, U., Kammenga, J. E. & Poulin, G., 2011, In : BMC Genomics. 12, 14 p., 510.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
RNA Interference
Genotype
Population
Escherichia coli
Developmental Biology

A fitness assay for comparing RNAi effects across multiple C. elegans genotypes

Elvin, M., Snoek, L. B., Frejno, M., Klemstein, U., Kammenga, J. E. & Poulin, G., 2012, Abstracts of papers presented at the Evolution of Caenorhabditis and Other Nematodes, Cold Spring Harbor Laboratory, New York, USA, 3-6 April 2012. p. 46-46

Research output: Chapter in Book/Report/Conference proceedingAbstract

quantitative trait loci
genotype
assays
Hawaii
nematology

A genetic basis for phenotypic plasticity in the nematode Caenorhabditis elegans

Gutteling, E. W., Riksen, J. A. G., Reszka, J., Bakker, J. & Kammenga, J. E., 2003, ESEBIX Abstracts : ESEBIX, Leeds, 2003. Leeds: ESEB, p. 17.15P

Research output: Chapter in Book/Report/Conference proceedingAbstract

50 Citations (Scopus)

A genome-wide library of CB4856/N2 introgression lines of Caenorhabditis elegans

Doroszuk, A., Snoek, L. B., Fradin, E., Riksen, J. A. G. & Kammenga, J. E., 2009, In : Nucleic acids research. 37, 16, p. e110 7 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Genomic Library
Caenorhabditis elegans
Libraries
Chromosome Mapping
Genetic Association Studies
31 Citations (Scopus)

Aging Uncouples Heritability and Expression-QTL in Caenorhabditis elegans

Viñuela Rodriguez, A., Snoek, L. B., Riksen, J. A. G. & Kammenga, J. E., 2012, In : G3 : Genes Genomes Genetics. 2, 5, p. 597-605

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Caenorhabditis elegans
Gene Expression
Gene Expression Regulation
Transcriptome
Population
16 Citations (Scopus)

A heritable antiviral RNAi response limits Orsay virus infection in Caenorhabditis elegans N2

Sterken, M. G., Snoek, L. B., Bosman, K. J., Daamen, J., Riksen, J. A. G., Bakker, J., Pijlman, G. P. & Kammenga, J. E., 2014, In : PLoS ONE. 9, 2, e89760.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Caenorhabditis elegans
Virus Diseases
RNA Interference
RNA interference
Viruses
2 Citations (Scopus)

A multi-parent recombinant inbred line population of C. elegans allows identification of novel QTLs for complex life history traits

Snoek, B. L., Volkers, J. M., Nijveen, H., Petersen, C., Dirksen, P., Sterken, M. G., Nakad, R., Riksen, J. A. G., Rosenstiel, P. C., Stastna, J. J., Braekman, B. P., Harvey, S. C., Schulenburg, H. & Kammenga, J. E., 12 Mar 2019, In : BMC Biology. 17, 17 p., 24.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
life history trait
inbred lines
quantitative trait loci
genotype
life history

A new approach to aging research: Death as a tipping point

Jovic, K., Grilli, J., Snoek, L. B., Allesina, S. & Kammenga, J. E., 2016.

Research output: Contribution to conferencePosterAcademic

Genetic Phenomena
Gene Regulatory Networks
Human Genome
Systems Analysis
Ecology

A new approach to aging research: Death as a tipping point

Jovic, K., Grilli, J., Snoek, L. B., Allesina, S. & Kammenga, J. E., 2016.

Research output: Contribution to conferencePosterAcademic

Genetic Phenomena
Gene Regulatory Networks
Human Genome
Systems Analysis
Ecology

A point-of-no-return leading to death in C. elegans

Jovic, K., Sterken, M. G., Grilli, J., Bevers, R. P. J., Rodriguez, M., Riksen, J. A. G., Allesina, S., Kammenga, J. E. & Snoek, L. B., 2017.

Research output: Contribution to conferencePosterAcademic

Application and standardisation of biochemical fingerprint techniques in View of the risk assessment of toxicant in soil ecosystems

Kammenga, J. E., Köhler, H. R., Dallinger, R., Simonson, V., Scott-Fordsmand, J., Weeks, J. M. & Donker, M. H., 1999, Silkeborg: National Environmental Research Institute. 48 p.

Research output: Book/ReportReportProfessional

18 Citations (Scopus)

A rapid and massive gene expression shift marking adolescent transition in C. elegans

Snoek, L. B., Sterken, M. G., Volkers, R. J. M., Klatter, M., Bosman, K. J., Bevers, R. P. J., Riksen, J. A. G., Smant, G., Cossins, A. R. & Kammenga, J. E., 2014, In : Scientific Reports. 4, 3912.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Gene Expression
Genes
Chromatin Assembly and Disassembly
Caenorhabditis elegans
Life Cycle Stages
4 Citations (Scopus)

AraQTL - Workbench and Archive for systems genetics in Arabidopsis thaliana

Nijveen, H., Ligterink, W., Keurentjes, J. J. B., Loudet, O., Long, J., Sterken, M. G., Prins, P., Hilhorst, H. W., De Ridder, D., Kammenga, J. E. & Snoek, B. L., 2017, In : The Plant Journal. 89, 6, p. 1225-1235

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Quantitative Trait Loci
Arabidopsis
quantitative trait loci
Arabidopsis thaliana
Genomics

Assessing Quality of MicroArrays in relation to Genetical Genomics Experiments

Prins, J. C. P., Breitling, R., Alda Alvarez, O., Bakker, J., Kammenga, J. E. & Jansen, R., 2005, 4th Annual meeting of the complex trait consortium, Groningen 26-29 June 2005. Groningen, p. 76

Research output: Chapter in Book/Report/Conference proceedingAbstract

Open Access

Assessment of Ecotoxicity at the Population Level using Demographic Parameters

Van Straalen, N. M. & Kammenga, J. E., 1998, Exotocicology. van Straalen, N. M. & Kammenga, J. E. (eds.). Wiley, p. 622-644

Research output: Chapter in Book/Report/Conference proceedingChapter

Assessment of ecotoxicity at the population level using demographic parameters.

van Straalen, N. M. & Kammenga, J. E., 1997, Ecotoxicology: ecological fundamentals, chemical exposure and biological effects. Schöörmann, G. & Markert, B. (eds.). Chichester: John Wiley and Sons, p. 621-643

Research output: Chapter in Book/Report/Conference proceedingChapter

44 Citations (Scopus)

A toxicity test in artificial soil based on the life-history strategy of the nematode Plectus acuminatus.

Kammenga, J. E., van Koert, P. H. G., Riksen, J. A. G., Korthals, G. W. & Bakker, J., 1996, In : Environmental Toxicology and Chemistry. 15, p. 722-727

Research output: Contribution to journalArticleAcademicpeer-review

Availability of food influences the effect of cadmium on biomass production in nematode populations.

Kammenga, J. E. & Boon, A. R., 1993, Poster SETAC-Congr. Lissabon (1993).

Research output: Chapter in Book/Report/Conference proceedingAbstract

A versatile soil toxicity test using the bacterivorous nematode Plectus acuminatus.

van Koert, P. H. G. & Kammenga, J. E., 1993, Abstract 4e PCBB Congr. Lunteren (1993).

Research output: Chapter in Book/Report/Conference proceedingAbstract

Bar-1 loss-of-function causes a developmental delay in intertwined with a DAF-16 stress response

Sterken, M. G., van der Bent, M. L., Volkers, R. J. M., Riksen, J. A. G., Schmid, T., Hajnal, A., Kammenga, J. E. & Snoek, L. B., 2014, Proceedings of the Berlin C. elegans Meeting 2014. p. 241-241

Research output: Chapter in Book/Report/Conference proceedingAbstract

Wnt Signaling Pathway
Ovum
Gene Expression
Catenins
Genes

Benut variatie modelworm beter (interview met dr. ir. J.E. Kammenga en dr.ir. L.B. Snoek)

Kammenga, J. E., Snoek, L. B. & van Maanen, G., 2013, In : Bionieuws. 23, 14, p. 1-1

Research output: Contribution to journalArticleProfessional

Open Access
37 Citations (Scopus)

Beyond induced mutants: using worms to study natural variation in genetic pathways

Kammenga, J. E., Philips, P. C., de Bono, M. & Doroszuk, A., 2008, In : Trends in Genetics. 24, 4, p. 178-185

Research output: Contribution to journalArticleAcademicpeer-review

Caenorhabditis
Caenorhabditis elegans
Mutation
Genetic Phenomena
Phenotype

Biochemical finger-print techniques as versatile tools for the risk assessment of chemicals in terrestrial invertebrates (BIOPRINT) : Programme and Abstract book

Kammenga, J. E., 1995, Fifth SETAC-Europe congress, Copenhagen, 25-28 June. - [S.l.] : [s.n.], 1995. p. 46

Research output: Chapter in Book/Report/Conference proceedingAbstract

153 Citations (Scopus)

Biomarkers in Terrestrial Invertebrates For Ecotoxicological Soil Risk Assessment

Kammenga, J. E., Dallinger, R., Donker, M. H., Köhler, H. R., Simonsen, V., Triebskorn, R. & Weeks, J. M., 2000, In : Reviews of Environmental Contamination and Toxicology. 164, p. 93-147

Research output: Contribution to journalArticleAcademicpeer-review

C. elegans as a model for genetic mapping of life-history traits

Kammenga, J. E. & Bakker, J., 1997, Programme Abstracts: Sixth Congress of the European Society for Evolutionary Biology, 24-28 August, Arnhem, The Netherlands, 1997. - [S.l.] : [s.n.], 1997. p. S14

Research output: Chapter in Book/Report/Conference proceedingAbstract

37 Citations (Scopus)

Caenorhabditis elegans DAF-16/FOXO Transcription Factor and Its Mammalian Homologs Associate with Age-Related Disease

Hesp, K., Smant, G. & Kammenga, J. E., 2015, In : Experimental Gerontology. 72, p. 1-7

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Caenorhabditis elegans
Insulin-Like Growth Factor I
Transcription Factors
Insulin
Heat-Shock Response

Caenorhabditis elegans males and hermaphrodites differ in susceptibility upon Orsay virus infection

van Sluijs, L., Liu, J. (ed.), Schrama, M. (ed.), van Hamond, S. (ed.), Pijlman, G. P. (ed.) & Kammenga, J. E. (ed.), 5 Jul 2018.

Research output: Contribution to conferencePosterAcademic

Caenorhabditis elegans
Virus Diseases
Eating
Viruses
Viral Load

CB4856/N2 introgression lines of C. elegans-a permanent population for QTL fine mapping

Doroszuk, A., Fradin, E., Riksen, J. A. G. & Kammenga, J. E., 2006, EMBO Workshop on the study of Evolutionary Biology with Caenorhabditis elegans and closely related species, Oeiras, Portugal, 24-26 May, 2006. p. 26-26

Research output: Chapter in Book/Report/Conference proceedingAbstractAcademic

CB4856/N2 Introgression Lines of Caenorhabditis elegans- a permanent population for QTL fine-mapping

Doroszuk, A., Fradin, E., van de Waterbeemd, B., Riksen, J. A. G. & Kammenga, J. E., 2005, Abstractbook of the 4th Annual Meeting of the Complex Trait Consortium. Groningen, p. 36 (16)

Research output: Chapter in Book/Report/Conference proceedingAbstract

Open Access

CB4856/N2 Introgression Lines of Caenorhabditis elegans- a permanent population for QTL fine-mapping.

Doroszuk, A., Fradin, E., van de Waterbeemd, B., Riksen, J. A. G. & Kammenga, J. E., 2007.

Research output: Contribution to conferencePosterProfessional

CB4856 /N2 Mapping populations: a new powerful resource for fine-mapping of complex traits

Doroszuk, A., Fradin, E., van de Waterbeemd, B., Riksen, J. A. G. & Kammenga, J. E., 2006, European Worm Meeting 2006, Hersonissos, Crete, Greece, 29 April - 3 May 2006. Hersonissos, Crete, Greece, p. 132-132

Research output: Chapter in Book/Report/Conference proceedingAbstractAcademic

Characterisation of effect patterns on earthworm Eisenia andrei from binary metal mixtures - descriptive modelling

Svendsen, C., Hankard, P. K., Spurgeon, D. J., Jonker, M. J., Kammenga, J. E. & Weeks, J. M., 2001, Abstract book of the 11th Annual Meeting of SETAC Europe 6-10 May 2001, Madrid, Spain : From basic science to decision-making: "The environmental Odyssey", Madrid, Spain, 2001. Brussels, Belgium: SETAC, p. 76

Research output: Chapter in Book/Report/Conference proceedingAbstract

Combining genetic variation with targeted knock-downs/outs to understand complex human disease pathways in C.elegans

Kammenga, J. E., 2012, 4th International conference on Quantitative Genetics: Understanding Variation in Complex Traits, Edinburgh, Scotland, 17-22 June, 2012. Edinburgh, Scotland: ICQG2012, p. 86-86

Research output: Chapter in Book/Report/Conference proceedingAbstract

Combining Genetic Variation with Targeted Knock-downs to Construct Gene Networks of Complex Human Diseases in C. elegans

Kammenga, J. E., Fisher, J., Li, Y., Swertz, M. A., Elvin, M., Poulin, G., Snoek, L. B., Rodriguez Sanchez, M., Beyer, A., Schrimpf, S., van de Velde, J., Escobar, J., Schmid, T., Zheng, C., Hajnal, A., Hengartner, M. & Jansen, R., 2011, Abstract Book of the 12th International Conference on Systems Biology, Heidelberg/Mannheim, Germany, 28 August - 1 September 2011. Heidelberg: IBM System Storage Solutions, p. 116-116

Research output: Chapter in Book/Report/Conference proceedingAbstract

Gene Regulatory Networks
RNA Interference
Genes
Gene Knockdown Techniques
Vulva

Combining natural genetic variation and vulval development mutants in Caenorhabditis elegans to understand complex human disease pathways

Rodriguez Sanchez, M., Snoek, L. B., Schmid, T., Hajnal, A. & Kammenga, J. E., 2012, Model Organisms to Human Biology: Cancer Genetics, Washington, USA, 17-20 June, 2012. Washington, USA: The Genetics Society of America, p. 89-90

Research output: Chapter in Book/Report/Conference proceedingAbstract

Comparative proteomics and transcriptomics in two C. elegans wild-type strains

Kamkina, P., Daube, M., Roschitzki, B., Grossmann, J., Volkers, J. M., Snoek, L. B., Kammenga, J. E., Schrimpf, S. & Hengartner, M., 2013, Proceedings of the 19th International C.elegans Meeting, 26-30 June 2013, Los Angeles, California, USA. p. 399-399

Research output: Chapter in Book/Report/Conference proceedingAbstract

Comparing species sensitivity to toxicants: phenotypic plasticity vs. concentration-response relationships.

Kammenga, J. E. & Riksen, J. A. G., 1996, In : Environmental Toxicology and Chemistry. 15, p. 1649-1653

Research output: Contribution to journalArticleAcademicpeer-review

14 Citations (Scopus)

Contrasting invertebrate immune defense behaviors caused by a single gene, the Caenorhabditis elegans neuropeptide receptor gene npr-1

Nakad, R., Snoek, B., Yang, W., Ellendt, S., Schneider, F., Mohr, T. G., Rösingh, L., Masche, A. C., Rosenstiel, P. C., Dierking, K., Kammenga, J. E. & Schulenburg, H., 1 Dec 2016, In : BMC Genomics. 17, 1, 20 p., 280.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Neuropeptide Receptors
Caenorhabditis elegans
Invertebrates
Bacillus thuringiensis
Quantitative Trait Loci
9 Citations (Scopus)

Contribution of trans regulatory eQTL to cryptic genetic variation in C. elegans

Snoek, B. L., Sterken, M. G., Bevers, R. P. J., Volkers, R. J. M., van 't Hof, A., Brenchley, R., Riksen, J. A. G., Cossins, A. & Kammenga, J. E., 2017, In : BMC Genomics. 18, 15 p., 500.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Hot Temperature
Gene Expression
Genes
Heat-Shock Response
Temperature
27 Citations (Scopus)

Critical Analysis of Soil Invertebrate Biomarkers: A Field Case Study in Avonmouth, UK

Weeks, J. M., Spurgeon, D. J., Svendsen, C., Hankard, P. K., Kammenga, J. E., Dallinger, R., Köhler, H. R., Simonsen, V. & Scott-Fordsmand, J., 2004, In : Ecotoxicology. 13, 8, p. 817-822

Research output: Contribution to journalArticleAcademicpeer-review

critical analysis
Biomarkers
Invertebrates
biomarker
Soil

Death as a tipping point: A new approach to aging research

Jovic, K., Grilli, J., Snoek, L. B., Allesina, S. & Kammenga, J. E., 2016, p. 140-140.

Research output: Contribution to conferencePosterAcademic

Caenorhabditis elegans
Research
Genetic Phenomena
Gene Regulatory Networks
Human Genome

Death as a tipping point-Merging disciplines to predict lifespan

Jovic, K., Grilli, J., Snoek, L. B., Allesina, S. & Kammenga, J. E., 31 Aug 2017.

Research output: Contribution to conferencePosterAcademic

Genetic Phenomena
Genes
Sociology
Gene Regulatory Networks
Systems Analysis

Demographic approaches in Ecotoxicology : State of the art

Kammenga, J. & Laskowski, R., 2000, Demographic approaches in Ecotoxicology: State of the art / Jan Kammenga and Ryszard Laskowski. Chichester, England: Wiley, p. 3-8

Research output: Chapter in Book/Report/Conference proceedingChapter

Demographic approaches in ecotoxicology-Open problems

Kammenga, J. & Laskowski, R., 2000, Demography in Ecotoxicology / Jan Kammenga and Ryszard Laskowski. Chichester, England: Wiley, p. 265-275

Research output: Chapter in Book/Report/Conference proceedingChapter