1988 …2020

Research output per year

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Research Output

2012

Genomic and phenotypic differences in Caenorhabditis elegans isolated from different habitats

Volkers, R. J. M., Snoek, L. B., Riksen, J. A. G., Schulenburg, H., Braeckman, B. & Kammenga, J. E., 2012, Abstracts of papers presented at the Evolution of Caenorhabditis and Other Nematodes, Cold Spring Harbor Laboratory, New York, USA, 3-6 April 2012. p. 92-92

Research output: Chapter in Book/Report/Conference proceedingAbstract

Identification of polymorphic modifiers of ras and wnt signaling in C. elegans

Schmid, T., Largey, F., Rodriguez Sanchez, M., Snoek, L. B., Kammenga, J. E. & Hajnal, A., 2012, 4th International conference on Quantitative Genetics: Understanding Variation in Complex Traits, Edinburgh, Scotland, 17-22 June, 2012. Edinburgh, Scotland: ICQG2012, p. 224-224

Research output: Chapter in Book/Report/Conference proceedingAbstract

The biological relevance of eQTLs: A genome wide confirmation of eQTLs using two types of inbred populations in C. elegans

Sterken, M. G., Snoek, L. B., Bevers, R. P. J., Brenchley, R. C., van 't Hof, A. E., Cossins, A. R. & Kammenga, J. E., 2012, 4th International Conference on Quantitative Genetics: Understanding Variation in Complex Traits, Edinburgh, Scotland, 17-22 June, 2012. Edinburgh, Scotland: ICQG2012, p. 47-47

Research output: Chapter in Book/Report/Conference proceedingAbstract

The genetic architecture of the transcriptional response to heat-shock in C. elegans

Sterken, M. G., Snoek, L. B., Bevers, R. P. J., Brenchley, R., van 't Hof, A., Cossins, A. R. & Kammenga, J. E., 2012, Abstracts of papers presented at the Evolution of Caenorhabditis and Other Nematodes, Cold Spring Harbor Laboratory, New York, USA, 3-6 April 2012. p. 102-102

Research output: Chapter in Book/Report/Conference proceedingAbstract

Unveiling cryptic genetic variation in C. elegans

Kammenga, J. E., 2012, Abstracts of papers presented at the Evolution of Caenorhabditis and Other Nematodes, Cold Spring Harbor Laboratory, New York, USA, 3-6 April 2012. p. 94-94

Research output: Chapter in Book/Report/Conference proceedingAbstract

WormQTL – Public archive and analysis web portal for C. elegans natural variation data

Snoek, L. B., Li, Y., van der Velde, J. K., Arends, D., Beyer, A., Elvin, M., Fisher, J., Hajnal, A., Hengartner, M., Poulin, G., Rodriguez Sanchez, M., Schmid, T., Schrimpf, S., Xue, F., Zheng, X., Jansen, R. C., Kammenga, J. E. & Swertz, M. A., 2012, Abstracts of papers presented at the Evolution of Caenorhabditis and Other Nematodes, Cold Spring Harbor Laboratory, New York, USA, 3-6 April 2012. p. 48-48

Research output: Chapter in Book/Report/Conference proceedingAbstract

“All” the sequence polymorphisms between Hawaii (CB4856) and Bristol (N2)

Snoek, L. B., Brenchley, R., van 't Hof, A., Bevers, R. P. J., de Bono, M., Hajnal, A., Schmid, T., Weber, K., Francesconi, M., Lehner, B., Cossins, A. & Kammenga, J. E., 2012, Abstracts of papers presented at the Evolution of Caenorhabditis and Other Nematodes, Cold Spring Harbor Laboratory, New York, USA, 3-6 April 2012. p. 47-47

Research output: Chapter in Book/Report/Conference proceedingAbstract

2013

Benut variatie modelworm beter (interview met dr. ir. J.E. Kammenga en dr.ir. L.B. Snoek)

Kammenga, J. E., Snoek, L. B. & van Maanen, G., 2013, In : Bionieuws. 23, 14, p. 1-1

Research output: Contribution to journalArticleProfessional

Open Access

Comparative proteomics and transcriptomics in two C. elegans wild-type strains

Kamkina, P., Daube, M., Roschitzki, B., Grossmann, J., Volkers, J. M., Snoek, L. B., Kammenga, J. E., Schrimpf, S. & Hengartner, M., 2013, Proceedings of the 19th International C.elegans Meeting, 26-30 June 2013, Los Angeles, California, USA. p. 399-399

Research output: Chapter in Book/Report/Conference proceedingAbstract

Gene-environment and protein degradation signatures characterize genomic and phenotypic diversity in wild Caenorhabditis elegans populations

Volkers, J. M., Snoek, L. B., van Hellenberg Hubar, C. J., Coopman, R., Chen, W., Yang, W., Sterken, M. G., Schulenburg, H., Braeckman, B. & Kammenga, J. E., 2013, In : BMC Biology. 11, 13 p., 93.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
29 Citations (Scopus)

Gene-environments interactions drive genomics and transcriptomic diversity in wild Caenorhabditis elegans populations

Volkers, J. M., Snoek, L. B., van Hellenberg Hubar, C. J., Coopman, R., Chen, W., Sterken, M. G., Schulenburg, H., Braekman, B. & Kammenga, J. E., 2013, Proceedings of the 19th International C.elegans Meeting, 26-30 June 2013, Los Angeles, California, USA. p. 317-317

Research output: Chapter in Book/Report/Conference proceedingAbstract

Genetic basis underlying differential susceptibility to bacteria in Caenorhabditis elegans

Wang, Z., Herman, M., Snoek, L. B. & Kammenga, J. E., 2013, Proceedings of the 19th International C.elegans Meeting, 26-30 June 2013, Los Angeles, California, USA. p. 184-184

Research output: Chapter in Book/Report/Conference proceedingAbstract

Genetic mapping of variation in dauer larvae development in growing populations of Caenorhabditis elegans

Green, J. W. M., Snoek, L. B., Kammenga, J. E. & Harvey, S. C., 2013, In : Heredity. 111, p. 306-313 8 p.

Research output: Contribution to journalArticleAcademicpeer-review

20 Citations (Scopus)

Maintenance of muscle myosin levels in adult C. elegans requires both the double bromodomain protein BET-1 and sumoylation

Fisher, K., Gee, F., Wang, S., Xue, F., Knapp, S., Philpott, M., Wells, C., Rodriguez, M., Snoek, L. B., Kammenga, J. E. & Poulin, G., 2013, In : Biology Open. 2, p. 1354-1363

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
4 Citations (Scopus)

Natural variation in Monoamine Oxidase A modulates RAS/MAPK pathway activity during C. elegans vulval development

Schmid, T., Snoek, L. B., Rodriguez, M., van der Bent, L., Despot Slade, E., Kammenga, J. E. & Hajnal, A., 2013, Proceedings of the 5th EMBO meeting, 21-24 September 2013, Amsterdam, the Netherlands. p. 49-49

Research output: Chapter in Book/Report/Conference proceedingAbstract

Orsay Virus infection dynamics in Caenorhabditis elegans

Sterken, M. G., Snoek, L. B., Bosman, K., Daamen, J., Riksen, J. A. G., Bakker, J., Pijlman, G. P. & Kammenga, J. E., 2013, Proceedings of the 5th EMBO meeting 2013, 21-24 September 2013, Amsterdam, the Netherlands. p. 113-114

Research output: Chapter in Book/Report/Conference proceedingAbstract

Orsay virus replication kinetics in C. elegans strain Bristol N2

Sterken, M. G., Bosman, K., Snoek, L. B., Daamen, J., Riksen, J. A. G., Bakker, J., Pijlman, G. P. & Kammenga, J. E., 2013, Proceedings of the 19th International C.elegans Meeting, 26-30 June 2013, Los Angeles, California, USA. p. 341-341

Research output: Chapter in Book/Report/Conference proceedingAbstract

Studying the effect of natural variation on protein abundance in C. elegans

Singh, K. D., Kamkina, P., Roschitzki, B., Elvin, M., Rodriguez, M., Poulin, G., Snoek, L. B., Kammenga, J. E., Schrimpf, S. & Hengartner, M., 2013, Proceedings of the 19th International C.elegans Meeting, 26-30 June 2013, Los Angeles, California, USA. p. 399-399

Research output: Chapter in Book/Report/Conference proceedingAbstract

The sudden transcriptional switch to adulthood in L4 stage C. elegans

Snoek, L. B., Sterken, M. G., Volkers, J. M., Klatter, M., Bosman, K., Bevers, R. P. J., Riksen, J. A. G. & Kammenga, J. E., 2013, Proceedings of the 19th International C.elegans Meeting, 26-30 June 2013, Los Angeles, California, USA. p. 331-331

Research output: Chapter in Book/Report/Conference proceedingAbstract

Uncovering genotype variation of Wnt signaling in C. elegans

Rodriguez, M., Snoek, L. B., Schmid, T., Samadi, N., van der Bent, L., Hajnal, A. & Kammenga, J. E., 2013, Proceedings of the 19th International C.elegans Meeting, 26-30 June 2013, Los Angeles, California, USA. p. 330-331

Research output: Chapter in Book/Report/Conference proceedingAbstract

Uncovering hidden Wnt/beta-catenin enhancer in Caenorhabditis elegans

Rodriguez, M., Snoek, L. B., Schmid, T., Riksen, J. A. G., Samadi, N., van der Bent, L., Grolleman, J., Hajnal, A. & Kammenga, J. E., 2013, Proceedings of 1st Annual Meeting, COST FA 1208, 09-11 October 2013, Birnam, Scotland. p. 55-55

Research output: Chapter in Book/Report/Conference proceedingAbstract

Widespread pleiotropic Bateson-Dobzhansky-Muller incompatibilities between C. elegans isolates

Orbidans, H. E., Snoek, L. B., Stastna, J., Kammenga, J. E. & Harvey, S. C., 2013, 19th International C.elegans Meeting, 26-30 June 2013, Los Angeles, California, USA. Genetics Society of America, p. 311-311

Research output: Chapter in Book/Report/Conference proceedingAbstract

WormQTL—public archive and analysis web portal for natural variation data in Caenorhabditis spp

Snoek, L. B., van der Velde, K. J., Arends, D., Li, Y., Beyer, A., Elvin, M., Fisher, J., Hajnal, A., Hengartner, M., Poulin, G., Rodriguez Sanchez, M., Schmid, T., Schrimpf, S., Xue, F., Jansen, R. C., Kammenga, J. E. & Swertz, M. A., 2013, In : Nucleic acids research. 41, D1, p. D738-D743

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
22 Citations (Scopus)

Worms under stress: C. elegans stress response and its relevance to complex human disease and aging

Rodriguez Sanchez, M., Snoek, L. B., de Bono, M. & Kammenga, J. E., 2013, In : Trends in Genetics. 29, 6, p. 367-374

Research output: Contribution to journalArticleAcademicpeer-review

79 Citations (Scopus)
2014

A heritable antiviral RNAi response limits Orsay virus infection in Caenorhabditis elegans N2

Sterken, M. G., Snoek, L. B., Bosman, K. J., Daamen, J., Riksen, J. A. G., Bakker, J., Pijlman, G. P. & Kammenga, J. E., 2014, In : PLoS ONE. 9, 2, e89760.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
16 Citations (Scopus)

A rapid and massive gene expression shift marking adolescent transition in C. elegans

Snoek, L. B., Sterken, M. G., Volkers, R. J. M., Klatter, M., Bosman, K. J., Bevers, R. P. J., Riksen, J. A. G., Smant, G., Cossins, A. R. & Kammenga, J. E., 2014, In : Scientific Reports. 4, 3912.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
18 Citations (Scopus)

Bar-1 loss-of-function causes a developmental delay in intertwined with a DAF-16 stress response

Sterken, M. G., van der Bent, M. L., Volkers, R. J. M., Riksen, J. A. G., Schmid, T., Hajnal, A., Kammenga, J. E. & Snoek, L. B., 2014, Proceedings of the Berlin C. elegans Meeting 2014. p. 241-241

Research output: Chapter in Book/Report/Conference proceedingAbstract

Dissecting the genetic architecture of resistance to orsay virus infection in C. elegans

Sterken, M. G., Wang, Y., Snoek, L. B., Volkers, R. J. M., Riksen, J. A. G., Bosman, K. J., Pijlman, G. P. & Kammenga, J. E., 2014, Proceedings of PhD Spring School Host-Microbe Interactomics. p. 12-12

Research output: Chapter in Book/Report/Conference proceedingAbstract

Dissecting the genetic architecture of resistance to orsay virus infection in C. elegans

Sterken, M. G., Wang, Y., Snoek, L. B., Volkers, R. J. M., Riksen, J. A. G., Bosman, K. J., Pijlman, G. P. & Kammenga, J. E., 2014, Proceedings of Evolutionary Biology of Caenorhabditis and other Nematodes. p. 111-111

Research output: Chapter in Book/Report/Conference proceedingAbstract

Genome wide mapping of stress-response and ageing pathway regulators

Sterken, M. G., Snoek, L. B., Bevers, R. P. J., Volkers, R. J. M., van 't Hof, A., Brenchley, R., van Cleef, E., Bartels, R., Laven, Y., Riksen, J. A. G., Cossins, A. R. & Kammenga, J. E., 2014, Proceedings of the Berlin C. elegans Meeting. p. 49-49

Research output: Chapter in Book/Report/Conference proceedingAbstract

Open Access

Identifying modifiers of Wnt and EGFR/RAS/MAPK signaling through quantitative C. elegans genetics

Maxeiner, S., Schmid, T., Snoek, L. B., Rodriguez Sanchez, M., Largey, F., van der Bent, L., Kammenga, J. E. & Hajnal, A. F., 2014, Proceedings of the FEBS-EMBO 2014. Vol. 281. p. 474-474

Research output: Chapter in Book/Report/Conference proceedingAbstract

Lifespan and the Effects of Dietary Restriction in a Multi-Parent Recombinant Inbred Line Panel in Caenorhabditis elegans

Stastna, J., Snoek, L. B., Volkers, R. J. M., Riksen, J. A. G., Kammenga, J. E. & Harvey, S., 2014, Proceedings of the Berlin C. elegans Meeting 2014. p. 240-240

Research output: Chapter in Book/Report/Conference proceedingAbstract

Loss-of-function of b-catenin bar-1 slows development and activates the Wnt pathway in Caenorhabditis elegans

van der Bent, M. L., Sterken, M. G., Volkers, J. M., Riksen, J. A. G., Schmid, T., Hajnal, A., Kammenga, J. E. & Snoek, L. B., 2014, In : Scientific Reports. 4, 7 p., 4926.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
10 Citations (Scopus)

Natural variation in lifespan and dietary restriction effects in a multi-parent recombinant inbred line panel in Caenorhabditis elegans

Stastna, J., Snoek, L. B., Volkers, R. J. M., Riksen, J. A. G., Schulenburg, H., Kammenga, J. E. & Harvey, S. C., 2014, Proceedings of The 2014 Evolution of Caenorhabditis and Other Nematodes Conference. p. 32-32

Research output: Chapter in Book/Report/Conference proceedingAbstract

Nematode endogenous small RNA pathways

Hoogstrate, S. W., Volkers, R. J. M., Sterken, M. G., Kammenga, J. E. & Snoek, L. B., 2014, In : Worm. 3, 1, 10 p., e28234.

Research output: Contribution to journalArticleAcademicpeer-review

Next-gen genetical genomics; RNA-sequencing of a new multi-parent recombinant inbred line population of Caenorhabditis elegans

Snoek, L. B., Volkers, R. J. M., Nijveen, H., Sterken, M. G., Riksen, J. A. G., Braeckman, B., Schulenburg, H. J. G. & Kammenga, J. E., 2014, Proceedings of Evolutionary Biology of Caenorhabditis and other Nematodes. p. 77-77

Research output: Chapter in Book/Report/Conference proceedingAbstract

Polymorphic regions and genes affecting gene transcription regulation of stress response and prolonged lifespan

Sterken, M. G., Snoek, L. B., Bevers, R. P. J., Volkers, R. J. M., van 't Hof, A., Brenchley, R., van Cleef, E., Bartels, R., Laven, Y., Riksen, J. A. G., Valba, O., Chavali, S., Lang, B., Francesconi, M., Bot, J., Nechaev, S., Vasieva, O., Babu, M., Lehner, B., Cossins, A. & 1 others, Kammenga, J. E., 2014, Proceedings of Evolutionary Biology of Caenorhabditis and other Nematodes. p. 33-33

Research output: Chapter in Book/Report/Conference proceedingAbstract

The effects of development on gene expression in L4 Caenorhabditis elegans larvae

Riksen, J. A. G., Snoek, L. B., Sterken, M. G., Volkers, R. J. M., Klatter, M., Bosman, K., Bevers, R. P. J., Smant, G., Cossins, A. R. & Kammenga, J. E., 2014, Proceedings of the Berlin C. elegans Meeting. p. 215-215

Research output: Chapter in Book/Report/Conference proceedingAbstract

The mysterious role of the C.elegans nuclear hormone receptor NPR-1 in pathogen defense

Nakad, R., Snoek, L. B., Dierking, K., Yang, W., Kammenga, J. E. & Schulenburg, H., 2014, Proceedings of the Berlin C. elegans Meeting 2014. p. 194-194

Research output: Chapter in Book/Report/Conference proceedingAbstract

Widespread Genomic Incompatibilities in Caenorhabditis elegans

Snoek, L. B., Orbidans, H. E., Stastna, J., Aartse, A., Rodriguez Sanchez, M., Riksen, J. A. G., Kammenga, J. E. & Harvey, S. C., 2014, In : G3 : Genes Genomes Genetics. 4, 10, p. 1813-1823

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
21 Citations (Scopus)

WormQTL HD—a web database for linking human disease to natural variation data in C. elegans

van der Velde, K. J., de Haan, M., Zych, K., Arends, D., Snoek, L. B., Kammenga, J. E., Jansen, R. C., Swertz, M. A. & Li, Y., 2014, In : Nucleic acids research. 42, D1, p. D794-D801

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
15 Citations (Scopus)

Worm variation made accessible: Take your shopping cart to store, link, and investigate!

Snoek, L. B., van der Velde, K. J., Li, Y., Jansen, R. C., Swertz, M. A. & Kammenga, J. E., 2014, In : Worm. 3, 1, 7 p., e28357.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
2015

Acute stress resistance, DR and Lifespan in a multi-parent recombinant inbred line panel

Stastna, J., Snoek, L. B., Volkers, J. M., Riksen, J. A. G., Vujakovic, A., Schulenburg, H., Kammenga, J. E. & Harvey, S., 2015.

Research output: Contribution to conferencePosterProfessional

A decrease in movement at a defined moment in life predicts death

Jovic, K., Bartels, R., Volkers, J. M., Sterken, M. G., Snoek, L. B. & Kammenga, J. E., 2015.

Research output: Contribution to conferencePosterProfessional

Caenorhabditis elegans DAF-16/FOXO Transcription Factor and Its Mammalian Homologs Associate with Age-Related Disease

Hesp, K., Smant, G. & Kammenga, J. E., 2015, In : Experimental Gerontology. 72, p. 1-7

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
37 Citations (Scopus)

Dietary restriction is not a universal means of prolonging the lifespan in nematode Caenorhabditis elegans

Stastna, J., Snoek, L. B., Kammenga, J. E. & Harvey, S. C., 2015.

Research output: Contribution to conferencePosterProfessional

Genotype-dependent lifespan effects in peptone deprived Caenorhabditis elegans

Stastna, J., Snoek, L. B., Kammenga, J. E. & Harvey, S. C., 2015, In : Scientific Reports. 5, 9 p., 16259.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
11 Citations (Scopus)

On predicting regulatory genes by analysis of functional networks in C. elegans

Valba, O. V., Nechaev, S., Sterken, M. G., Snoek, L. B., Kammenga, J. E. & Vasieva, O., 2015, In : BioData Mining. 8, 1, 16 p., 33.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Opposite immune responses in Caenorhabditis elegans caused by a single gene, the neuropeptide receptor gene npr-1

Nakad, R., Snoek, L. B., Yang, W., Dierking, K., Rosenstiel, P. C., Kammenga, J. E. & Schulenburg, H., 2015, Proceedings of the 20th International C. elegans Meeting. Los Angeles, USA, p. 62-62

Research output: Chapter in Book/Report/Conference proceedingAbstract

Remarkably divergent regions punctuate the genome assembly of the Caenorhabditis elegans Hawaiian strain CB4856

Thompson, O. A., Snoek, L. B., Nijveen, H., Sterken, M. G., Volkers, R. J. M., Brenchley, R., van 't Hof, A., Bevers, R. P. J., Cossins, A. R., Yanai, I., Hajnal, A., Schmid, T., Perkins, J. D., Spencer, D., Kruglyak, L., Andersen, E. C., Moerman, D. G., Hillier, L. W., Kammenga, J. E. & Waterston, R. H., 2015, In : Genetics. 200, 3, p. 975-989

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
43 Citations (Scopus)