1988 …2020

Research output per year

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Research Output

2007

A Caenorhabditis elegans Wild Type Defies the Temperature-Size Rule Owing to a Single Nucleotide Polymorphism in tra-3

Kammenga, J. E., Doroszuk, A., Riksen, J. A. G., Hazendonk, E., Spiridon, L. N., Petrescu, A. J., Tijsterman, M., Plasterk, R. H. A. & Bakker, J., 2007, In : Plos Genetics. 3, 3, e34.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
63 Citations (Scopus)

Adaptation to multiple stressors through stress-specific mechnisms in natural populations

Doroszuk, A., Garcia-Gallego, R. & Kammenga, J. E., 2007, XI Congress European Society for Evolutionary Biology, 20-25 August, 2007, Uppsala, Sweden. Uppsala, p. 48

Research output: Chapter in Book/Report/Conference proceedingAbstract

Open Access

CB4856/N2 Introgression Lines of Caenorhabditis elegans- a permanent population for QTL fine-mapping.

Doroszuk, A., Fradin, E., van de Waterbeemd, B., Riksen, J. A. G. & Kammenga, J. E., 2007.

Research output: Contribution to conferencePosterProfessional

Environmental influence on the genetic correlations between life-history traits in Caenorhabditis elegans

Gutteling, E. W., Doroszuk, A., Riksen, J. A. G., Prokop, Z., Reszka, J. & Kammenga, J. E., 2007, In : Heredity. 98, 4, p. 206-213

Research output: Contribution to journalArticleAcademicpeer-review

44 Citations (Scopus)

Genetics of the temperature-size rule in C.elegans

Kammenga, J. E., Doroszuk, A., Riksen, J. A. G., Hazendonk, E., Spiridon, L. N., Petrescu, A. J., Tijsterman, M., Plasterk, R. H. A. & Bakker, J., 2007, XI Congress of the European Society for Evolutionary Biology, Uppsala, Sweden, 20 - 25 August, 2007. Uppsala, p. 358

Research output: Chapter in Book/Report/Conference proceedingAbstract

Open Access

Genetic variation and genome-environmental interactions in C.elegans

Kammenga, J. E., 2007, 14th Benelux Congress of Zoology, Amsterdam, The Netherlands, 1 - 2 November, 2007. p. 17

Research output: Chapter in Book/Report/Conference proceedingAbstract

Mapping phenotypic plasticity and genotype-environment interactions affecting life-history traits in Caenorhabditis elegans

Gutteling, E. W., Riksen, J. A. G., Bakker, J. & Kammenga, J. E., 2007, In : Heredity. 98, 1, p. 28-37

Research output: Contribution to journalArticleAcademicpeer-review

82 Citations (Scopus)

Metals affect secondary stress sensitivity of nematode field populations

van der Wurff, A. W. G., Kools, S. A. E., Boivin, M. E. Y., van den Brink, P. J., van Megen, H. H. B., Riksen, J. A. G., Doroszuk, A. & Kammenga, J. E., 2007, Exposure and ecological effects of toxic mixtures at field-relevant concentrations: Model validation and integration of the SSEO programme. posthuma, L. & Vijver, M. G. (eds.). Bilthoven, p. 115-117 199 p. (RIVM Rapporten; no. 860706002/2007).

Research output: Chapter in Book/Report/Conference proceedingChapter

Open Access

Microarray challenges in ecology

Kammenga, J. E., Herman, M. A., Ouborg, N. J., Johnson, L. & Breitling, R., 2007, In : Trends in Ecology and Evolution. 22, 5, p. 273-279

Research output: Contribution to journalArticleAcademicpeer-review

62 Citations (Scopus)

Microarrays challenges in ecotoxicology

Kammenga, J. E., 2007.

Research output: Contribution to conferenceAbstractAcademic

Response of secondary production and its components to multiple stressors in nematode field populations.

Doroszuk, A., te Brake, E., Crespo-Gonzalez, D. & Kammenga, J. E., 2007, In : Journal of Applied Ecology. 44, 2, p. 446-455

Research output: Contribution to journalArticleAcademicpeer-review

15 Citations (Scopus)

Type of disturbance and ecological history determine structural stability

van der Wurff, A. W. G., Kools, S. A. E., Boivin, M. E. Y., van den Brink, P. J., van Megen, H. H. B., Riksen, J. A. G., Doroszuk, A. & Kammenga, J. E., 2007, In : Ecological Applications. 17, 1, p. 190-202

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
27 Citations (Scopus)
2008

Beyond induced mutants: using worms to study natural variation in genetic pathways

Kammenga, J. E., Philips, P. C., de Bono, M. & Doroszuk, A., 2008, In : Trends in Genetics. 24, 4, p. 178-185

Research output: Contribution to journalArticleAcademicpeer-review

37 Citations (Scopus)

Rapid Divergence of Genetic Variance-Covariance Matrix within a Natural Population

Doroszuk, A., Wojewodzic, M. W., Gort, G. & Kammenga, J. E., 2008, In : American Naturalist. 171, 3, p. 291-304

Research output: Contribution to journalArticleAcademicpeer-review

37 Citations (Scopus)

The genetic architecture of life-history variation

Kammenga, J. E. & Snoek, L. B., 2008, Keystone symposia on Molecular and Cellular Biology 2008 abstract book, February 29 - March 5, 2008, Santa Fe, New Mexico, USA. Silverthorne, p. 54-54

Research output: Chapter in Book/Report/Conference proceedingAbstract

2009

A genome-wide library of CB4856/N2 introgression lines of Caenorhabditis elegans

Doroszuk, A., Snoek, L. B., Fradin, E., Riksen, J. A. G. & Kammenga, J. E., 2009, In : Nucleic acids research. 37, 16, p. e110 7 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
52 Citations (Scopus)

Genome-wide evidence for genetic robustness of the alternative: splicing machinery in C. Elegans

Snoek, L. B., Li, Y., Breitling, R., Riksen, J. A. G., Jansen, R. C. & Kammenga, J. E., 2009, Program and abstracts of the 17th International C. Elegans meeting: University of California, Los Angeles, June 24-28, 2009. p. 404 (974B)

Research output: Chapter in Book/Report/Conference proceedingAbstract

Open Access

Identification of QTL involved in the C. Elegans response to soil bacteria

Herman, M. A., Snoek, L. B., Wang, Z. & Kammenga, J. E., 2009, 17th International C. Elegans Meeting, Los Angeles, California, 24-28 June 2009. p. 169

Research output: Chapter in Book/Report/Conference proceedingAbstract

Mapping Quantitative Trait Loci Involved in Caenorhabditis elegans Response to Soil Bacteria

Wang, Z., Herman, M. A., Snoek, L. B. & Kammenga, J. E., 2009, Poster abstracts of the Ecological Genomics Symposium: Genes in Ecology. Ecology in Genes, November 13-15, 2009, Kansas, USA. Kansas City, p. 28 (53)

Research output: Chapter in Book/Report/Conference proceedingAbstract

Natural variation of the dynamics of global gene transcription: regulation in aging worms

Viñuela Rodriguez, A., Snoek, L. B., Riksen, J. A. G. & Kammenga, J. E., 2009, Program and abstracts of the 17th International C. Elegans meeting, University of California, Los Angeles, June 24-28, 2009. Los Angeles, p. 355 (832A)

Research output: Chapter in Book/Report/Conference proceedingAbstract

Open Access

Natural variation of the dynamics of global gene transcription: regulation in aging worms

Viñuela Rodriguez, A., Snoek, L. B., Riksen, J. A. G. & Kammenga, J. E., 2009, European Conference on Complex Systems' 09, Warwick, UK, 21-25 September 2009. Warwick, p. 144-144

Research output: Chapter in Book/Report/Conference proceedingAbstract

Open Access

Natural variation of the dynamics of global gene transcription regulation in aging worms

Viñuela Rodriguez, A., Snoek, L. B., Riksen, J. A. G. & Kammenga, J. E., 2009, Abstract book of the 1 symposium on Systems Genetics: from man to microbe, from genotype to phenotype, Groningen, The Netherlands, 1-2 October 2009. p. 56

Research output: Chapter in Book/Report/Conference proceedingAbstract

Natural variation reveals the autophagy gene unc-51 as a key connection between sex and death in C. Elegans

Snoek, L. B., Viñuela Rodriguez, A., Gutteling, E. W., Riksen, J. A. G. & Kammenga, J. E., 2009, Program and abstracts of the 17th International C. Elegans meeting, University of California, Los Angeles, June 24-28, 2009. Los Angeles, p. 184 (328A)

Research output: Chapter in Book/Report/Conference proceedingAbstract

Open Access

Nematicidal activity of plant extracts against the root-knot nematode, Meloidogyne incognita

Wiratno, Taniwiryono, D., van den Berg, J. H. J., Riksen, J. A. G., Rietjens, I., Djiwanti, S. R., Kammenga, J. E. & Murk, A. J., 2009, In : The Open Natural Products Journal. 2, p. 77-85

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

The transcriptional architecture of the trade-off between lifespan and offspring

Snoek, L. B., Viñuela Rodriguez, A., Gutteling, E. W., Doroszuk, A., Riksen, J. A. G. & Kammenga, J. E., 2009, Abstracts ESEB, 24-29 September 2009, Torino, Italy. Torino: ESEB, p. 10-60 Poster

Research output: Chapter in Book/Report/Conference proceedingAbstract

The transcriptional mechanisms of organophosphorus pesticide mixtures in C. Elegans

Viñuela Rodriguez, A., Snoek, L. B., Riksen, J. A. G. & Kammenga, J. E., 2009, 17th International C. Elegans Meeting, Los Angeles, California, 24-28 June 2009. Los Angeles, p. 379

Research output: Chapter in Book/Report/Conference proceedingAbstract

2010

Genetic architecture of natural variation in caenorhabditis elegans pathogen avoidance

Nakad, R., Kammenga, J. E. & van de Schulenburg, J. H. G., 2010, Scientific Conference on Evolutionary Biology of Caenorhabditis and other Nematodes, Hinxton, Cambridge, UK, 5-8 June 2010. p. P35-P35

Research output: Chapter in Book/Report/Conference proceedingAbstract

Genome-Wide Gene Expression Analysis in Response to Organophosphorus Pesticide Chlorpyrifos and Diazion in C.Elegans

Viñuela Rodriguez, A., Snoek, L. B., Riksen, J. A. G. & Kammenga, J. E., 2010, In : PLoS ONE. 5, 8, 8 p., e12145.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
35 Citations (Scopus)

Genome-wide gene expression regulation as a function of genotype and age in C. elegans

Viñuela Rodriguez, A., Snoek, L. B., Riksen, J. A. G. & Kammenga, J. E., 2010, In : Genome Research. 20, 7, p. 929-937

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
72 Citations (Scopus)

Global Genetic Robustness of the Alternative Splicing Machinery in Caenorhabditis elegans

Li, Y., Breitling, R., Snoek, L. B., van der Velde, K. J., Swertz, M. A., Riksen, J. A. G., Jansen, R. C. & Kammenga, J. E., 2010, In : Genetics. 186, p. 405-410

Research output: Contribution to journalArticleAcademicpeer-review

36 Citations (Scopus)

Heritable Expression Regulation in Aging C.Elegans

Viñuela Rodriguez, A., Snoek, L. B., Riksen, J. A. G. & Kammenga, J. E., 2010.

Research output: Contribution to conferenceAbstractAcademic

Heritable expression regulation in aging C. elegans

Viñuela Rodriguez, A., Snoek, L. B., Riksen, J. A. G. & Kammenga, J. E., 2010, Scientific Conference on Evolutionary Biology of Caenorhabditis and other Nematodes, Hinxton, Cambridge, UK, 5-8 June 2010. Cambridge, p. T29-T29

Research output: Chapter in Book/Report/Conference proceedingAbstract

Heritable Expression Regulation in Aging C. Elegans

Viñuela Rodriguez, A., Snoek, L. B., Riksen, J. A. G. & Kammenga, J. E., 2010.

Research output: Contribution to conferencePosterProfessional

Open Access

Natural variation of genome-wide transcription underlying longevity and stress response in C. Elegans

Rodriguez Sanchez, M., Snoek, L. B., Riksen, J. A. G. & Kammenga, J. E., 2010, Scientific Conference on Evolutionary Biology of Caenorhabditis and other Nematodes, Hinxton, Cambridge, UK, 5-8 June 2010. p. P49-P49

Research output: Chapter in Book/Report/Conference proceedingAbstract

Natural variation of the dynamics of global gene transcription regulation in aging worms

Viñuela Rodriguez, A., Snoek, L. B., Riksen, J. A. G. & Kammenga, J. E., 2010.

Research output: Contribution to conferencePosterProfessional

Next-gen transcriptiome sequencing reveals polymorphisms and expression differences between two C.elegans wildtype isolates, CB4856 and N2

Snoek, L. B., Riksen, J. A. G. & Kammenga, J. E., 2010, Scientific Conference on Evolutionary Biology of Caenorhabditis and other Nematodes, Hinxton, Cambridge, UK, 5-8 June 2010. p. P67-P67

Research output: Chapter in Book/Report/Conference proceedingAbstract

The genetic basis of plasticity in C. Elegans responses to soil bacteria

Herman, M. A., Wang, Z., Snoek, L. B. & Kammenga, J. E., 2010, Scientific Conference on Evolutionary Biology of Caenorhabditis and other Nematodes, Hinxton, Cambridge, UK, 5-8 June 2010. p. P25-P25

Research output: Chapter in Book/Report/Conference proceedingAbstract

Transcriptional consequences of recombination in aging C. elegans

Viñuela Rodriguez, A., Snoek, L. B., Riksen, J. A. G. & Kammenga, J. E., 2010, Scientific Conference on Evolutionary Biology of Caenorhabditis and other Nematodes, Hinxton, Cambridge, UK, 5-8 June 2010. p. P71-P71

Research output: Chapter in Book/Report/Conference proceedingAbstract

2011

A fitness assay for comparing RNAi effects across multiple C. elegans genotypes

Elvin, M., Snoek, L. B., Frejno, M., Klemstein, U., Kammenga, J. E. & Poulin, G., 2011, In : BMC Genomics. 12, 14 p., 510.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
21 Citations (Scopus)

Combining Genetic Variation with Targeted Knock-downs to Construct Gene Networks of Complex Human Diseases in C. elegans

Kammenga, J. E., Fisher, J., Li, Y., Swertz, M. A., Elvin, M., Poulin, G., Snoek, L. B., Rodriguez Sanchez, M., Beyer, A., Schrimpf, S., van de Velde, J., Escobar, J., Schmid, T., Zheng, C., Hajnal, A., Hengartner, M. & Jansen, R., 2011, Abstract Book of the 12th International Conference on Systems Biology, Heidelberg/Mannheim, Germany, 28 August - 1 September 2011. Heidelberg: IBM System Storage Solutions, p. 116-116

Research output: Chapter in Book/Report/Conference proceedingAbstract

Gene Expression Modifications by Temperature-Toxicants Interactions in Caenorhabditis elegans

Vinuela Rodriguez, A., Snoek, L. B., Riksen, J. A. G. & Kammenga, J. E., 2011, In : PLoS ONE. 6, 9, 11 p., e24676.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
10 Citations (Scopus)

Genetic architecture of natural variation in Caenorhabditis elegans pathogen avoidance

Nakad, R., Snoek, L. B., Ellendt, S., Mohr, T. G., Dierking, K., Kammenga, J. E. & van de Schulenburg, J. H. G., 2011.

Research output: Contribution to conferencePosterProfessional

Open Access

Genome-wide conformation of expression QTLs

Snoek, L. B., Bevers, R. P. J., Sterken, M. G., van 't Hof, A., Ashelford, K., Cossins, A. R. & Kammenga, J. E., 2011.

Research output: Contribution to conferencePosterProfessional

QTLs and Implications for Network Analysis

Snoek, L. B., Sterken, M. G., Bevers, R. P. J., Ashelford, K., van 't Hoff, C. A., Vasieva, O., Cossins, A. R. & Kammenga, J. E., 2011, Abstract Book of the 12th International Conference on Systems Biology, Heidelberg/Mannheim, Germany, 28 August - 1 September 2011. Heidelberg: IBM System Storage Solutions, p. 119-119

Research output: Chapter in Book/Report/Conference proceedingAbstract

Quantitative pathway analysis of natural variation in complex disease signaling in C. elegans

Zheng, C., Li, X., Laczko, E., Elvin, M., Poulin, G., Snoek, L. B., Kammenga, J. E., Jovanovic, M., Schrimpf, S. & Hengartner, M., 2011.

Research output: Contribution to conferencePosterProfessional

2012

A fitness assay for comparing RNAi effects across multiple C. elegans genotypes

Elvin, M., Snoek, L. B., Frejno, M., Klemstein, U., Kammenga, J. E. & Poulin, G., 2012, Abstracts of papers presented at the Evolution of Caenorhabditis and Other Nematodes, Cold Spring Harbor Laboratory, New York, USA, 3-6 April 2012. p. 46-46

Research output: Chapter in Book/Report/Conference proceedingAbstract

Aging Uncouples Heritability and Expression-QTL in Caenorhabditis elegans

Viñuela Rodriguez, A., Snoek, L. B., Riksen, J. A. G. & Kammenga, J. E., 2012, In : G3 : Genes Genomes Genetics. 2, 5, p. 597-605

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
31 Citations (Scopus)

Combining genetic variation with targeted knock-downs/outs to understand complex human disease pathways in C.elegans

Kammenga, J. E., 2012, 4th International conference on Quantitative Genetics: Understanding Variation in Complex Traits, Edinburgh, Scotland, 17-22 June, 2012. Edinburgh, Scotland: ICQG2012, p. 86-86

Research output: Chapter in Book/Report/Conference proceedingAbstract

Combining natural genetic variation and vulval development mutants in Caenorhabditis elegans to understand complex human disease pathways

Rodriguez Sanchez, M., Snoek, L. B., Schmid, T., Hajnal, A. & Kammenga, J. E., 2012, Model Organisms to Human Biology: Cancer Genetics, Washington, USA, 17-20 June, 2012. Washington, USA: The Genetics Society of America, p. 89-90

Research output: Chapter in Book/Report/Conference proceedingAbstract

Genetic variation for stress-response hormesis in C. elegans lifespan

Rodriguez Sanchez, M., Snoek, L. B., Riksen, J. A. G., Bevers, R. P. J. & Kammenga, J. E., 2012, In : Experimental Gerontology. 47, 8, p. 581-587

Research output: Contribution to journalArticleAcademicpeer-review

40 Citations (Scopus)