1988 …2020

Research output per year

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Research Output

2020

Genetic Variation in Caenorhabditis elegans Responses to Pathogenic Microbiota

Huang, Y. & Kammenga, J. E., 24 Apr 2020, In : Microorganisms. 8, 4, 618.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

WormQTL2: an interactive platform for systems genetics in Caenorhabditis elegans

Snoek, B. L., Sterken, M. G., Hartanto, M., Van Zuilichem, A-J., Kammenga, J. E., De Ridder, D. & Nijveen, H., 21 Jan 2020, In : Database : the Journal of Biological Databases and Curation. 2020, baz149.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
1 Citation (Scopus)
2019

A multi-parent recombinant inbred line population of C. elegans allows identification of novel QTLs for complex life history traits

Snoek, B. L., Volkers, J. M., Nijveen, H., Petersen, C., Dirksen, P., Sterken, M. G., Nakad, R., Riksen, J. A. G., Rosenstiel, P. C., Stastna, J. J., Braekman, B. P., Harvey, S. C., Schulenburg, H. & Kammenga, J. E., 12 Mar 2019, In : BMC Biology. 17, 17 p., 24.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
3 Citations (Scopus)

Evolution of hatching stimulant perception in Potato Cyst Nematode

Vlaar, L., Rahimi, M., Rodriguez, A., Helder, J., Goverse, A., Kammenga, J. E. & Bouwmeester, H. J., 8 Apr 2019.

Research output: Contribution to conferencePosterAcademic

Gene expression profile in a C. elegans model of Alpha-Synuclein with variable natural genetic background and their phenotypic variations

Wang, Y. A., Snoek, L. B., Sterken, M. G., Riksen, J. A. G., Stastna, J. J., Kammenga, J. E. & Harvey, S., May 2019.

Research output: Contribution to conferencePosterAcademic

Genetic background modifies phenotypic and transcriptional responses in a C. elegans model of α-synuclein toxicity

Wang, Y. A., Snoek, B. L., Sterken, M. G., Riksen, J. A. G., Stastna, J. J., Kammenga, J. E. & Harvey, S. C., 20 Mar 2019, In : BMC Genomics. 20, 1, 12 p., 232.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
1 Citation (Scopus)

Selection and gene flow shape niche-associated variation in pheromone response

Lee, D., Zdraljevic, S., Cook, D. E., Frézal, L., Hsu, J-C., Sterken, M. G., Riksen, J. A. G., Wang, J., Kammenga, J. E., Braendle, C., Félix, M-A., Schroeder, F. C. & Andersen, E. C., 1 Oct 2019, In : Nature Ecology & Evolution. 3, p. 1455-1463

Research output: Contribution to journalArticleAcademicpeer-review

2 Citations (Scopus)

Sex-specific viral susceptibility of Caenorhabditis elegans nematodes

van Sluijs, L., Liu, J., Schrama, M., van Hamond, S., Vromans, S., Pijlman, G. P. & Kammenga, J. E., 22 May 2019.

Research output: Contribution to conferencePoster

The hypoxia-response pathway modulates RAS/MAPK–mediated cell fate decisions in Caenorhabditis elegans

Maxeiner, S., Grolleman, J., Schmid, T., Kammenga, J. E. & Hajnal, A., 24 May 2019, In : Life Science Alliance. 2, 3, e201800255.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
1 Citation (Scopus)

The importance of different genetic backgrounds in α-synuclein pathology studies in C. elegans

Wang, Y. A., Sterken, M. G., Nie, Y., Harvey, S. & Kammenga, J. E., 28 Nov 2019.

Research output: Contribution to conferenceAbstractAcademic

Transcriptome resilience predicts thermotolerance in Caenorhabditis elegans

Jovic, K., Grilli, J., Sterken, M. G., Snoek, B. L., Riksen, J. A. G., Allesina, S. & Kammenga, J. E., 10 Dec 2019, In : BMC Biology. 17, 1, 102.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
2018

Caenorhabditis elegans males and hermaphrodites differ in susceptibility upon Orsay virus infection

van Sluijs, L., Liu, J. (ed.), Schrama, M. (ed.), van Hamond, S. (ed.), Pijlman, G. P. (ed.) & Kammenga, J. E. (ed.), 5 Jul 2018.

Research output: Contribution to conferencePoster

Forward and reverse genetics approaches to uncover metabolic aging pathways in Caenorhabditis elegans

Gao, A. W., uit de Bos, J., Sterken, M. G., Kammenga, J. E., Smith, R. L. & Houtkooper, R. H., Sep 2018, In : Biochimica et Biophysica Acta. Molecular Basis of Disease. 1864, 9A, p. 2697-2706 36 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
8 Citations (Scopus)

Genetic variation causes differential viral susceptibilities in the model organism Caenorhabditis elegans

van Sluijs, L., Sterken, M. G., Wang, Y. A., Ritmahan, W., Gultom, M., Pankok, F., Blokhina, T., Riksen, J. A. G., Volkers, J. M., Snoek, L. B., Pijlman, G. P. & Kammenga, J. E., 23 May 2018.

Research output: Contribution to conferencePoster

Open Access
6 Citations (Scopus)

Identification of natural variants that influence behavioral responses to ethanol in C. elegans

Bettinger, J., Kammenga, J. E., Mathies, L. & Davies, A., 4 Mar 2018.

Research output: Contribution to conferencePosterAcademic

Natural genetic variation in C. elegans identified genomic loci controlling metabolite levels

Sterken, M. G., Gao, A. W., uit de Bos, J. (ed.), van Creij, J. W. (ed.), Kamble, R. (ed.), Snoek, L. B. (ed.), Kammenga, J. E. (ed.) & Houtkooper, R. H. (ed.), Jul 2018.

Research output: Contribution to conferencePosterAcademic

Natural genetic variation in C. elegans identified genomic loci controlling metabolite levels

Gao, A. W., Sterken, M. G., Uit De Bos, J., van Creij, J., Kamble, R., Snoek, B. L., Kammenga, J. E. & Houtkooper, R. H., 14 Aug 2018, In : Genome Research. 28, 8, p. 1296-1308

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
6 Citations (Scopus)

Natural plant hormones cytokinins increase stress resistance and longevity of Caenorhabditis elegans

Kadlecová, A., Jirsa, T., Novák, O., Kammenga, J., Strnad, M. & Voller, J., Apr 2018, In : Biogerontology. 19, 2, p. 109-120

Research output: Contribution to journalArticleAcademicpeer-review

5 Citations (Scopus)

Population complexity trumps model complexity in understanding trait variation

Sterken, M. G., Snoek, L. B., Bevers, R. P. J., Volkers, J. M., Riksen, J. A. G. & Kammenga, J. E., 16 May 2018.

Research output: Contribution to conferencePosterAcademic

Predicting individual differences in viral susceptibility caused by natural genetic variation within species

van Sluijs, L., Sterken, M. G., Wang, Y. A., Ritmahan, W., Gultom, M., Pankok, F., Blokhina, T., Riksen, J. A. G., Volkers, J. M., Snoek, L. B., Pijlman, G. P. & Kammenga, J. E., 17 Jun 2018.

Research output: Contribution to conferencePoster

Quantifying resilience of humans and other animals

Scheffer, M., Bolhuis, J. E., Borsboom, D., Buchman, T. G., Gijzel, S. M. W., Goulson, D., Kammenga, J. E., Kemp, B., van de Leemput, I. A., Levin, S., Martin, C. M., Melis, R. J. F., van Nes, E. H., Romero, L. M. & Olde Rikkert, M. G. M., 20 Nov 2018, In : Proceedings of the National Academy of Sciences of the United States of America. 115, 47, p. 11883-11890

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
31 Citations (Scopus)

Rictor/TORC2 mediates gut-to-brain signaling in the regulation of phenotypic plasticity in C. elegans

O’Donnell, M. P., Chao, P-H., Kammenga, J. E. & Sengupta, P., 7 Feb 2018, In : Plos Genetics. 14, 2, e1007213.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
8 Citations (Scopus)
2017

A point-of-no-return leading to death in C. elegans

Jovic, K., Sterken, M. G., Grilli, J., Bevers, R. P. J., Rodriguez, M., Riksen, J. A. G., Allesina, S., Kammenga, J. E. & Snoek, L. B., 2017.

Research output: Contribution to conferencePosterAcademic

AraQTL - Workbench and Archive for systems genetics in Arabidopsis thaliana

Nijveen, H., Ligterink, W., Keurentjes, J. J. B., Loudet, O., Long, J., Sterken, M. G., Prins, P., Hilhorst, H. W., De Ridder, D., Kammenga, J. E. & Snoek, B. L., 2017, In : The Plant Journal. 89, 6, p. 1225-1235

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
4 Citations (Scopus)

Contribution of trans regulatory eQTL to cryptic genetic variation in C. elegans

Snoek, B. L., Sterken, M. G., Bevers, R. P. J., Volkers, R. J. M., van 't Hof, A., Brenchley, R., Riksen, J. A. G., Cossins, A. & Kammenga, J. E., 2017, In : BMC Genomics. 18, 15 p., 500.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
9 Citations (Scopus)

Death as a tipping point-Merging disciplines to predict lifespan

Jovic, K., Grilli, J., Snoek, L. B., Allesina, S. & Kammenga, J. E., 31 Aug 2017.

Research output: Contribution to conferencePosterAcademic

Disparate gain and loss of parasitic abilities among nematode lineages

Holterman, M., Karegar, A., Mooijman, P., van Megen, H., van den Elsen, S., Vervoort, M. T. W., Quist, C. W., Karssen, G., Decraemer, W., Opperman, C. H., Bird, D. M., Kammenga, J., Goverse, A., Smant, G. & Helder, H., 2017, In : PLoS ONE. 12, 9, 18 p., e0185445.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
11 Citations (Scopus)

Genetic variation in neurodegenerative diseases and its accessibility in the modelorganism Caenorhabditis elegans

Wang, Y. A., Kammenga, J. E. & Harvey, S. C., 2017, In : Human Genomics. 11, 12.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
8 Citations (Scopus)

Microarray profiling of gene expression in Alpha-Synuclein aggregations and its alteration by natural genetic variation in Caenorhabditis elegans

Wang, Y. A., Snoek, L. B., Sterken, M. G., Riksen, J. A. G., Cook, D., Tanny, R. E., Andersen, E. C., Kammenga, J. E. & Harvey, S., 2017.

Research output: Contribution to conferencePosterAcademic

Ras/MAPK Modifier Loci Revealed by eQTL in Caenorhabditis elegans

Sterken, M. G., van Bemmelen-van der Plaat, L., Riksen, J. A., Rodriguez, M., Schmid, T., Hajnal, A., Kammenga, J. E. & Snoek, B. L., 2017, In : G3 : Genes Genomes Genetics. 7, 9, p. 3185-3193

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
6 Citations (Scopus)

reGenotyper: Detecting mislabeled samples in genetic data

Zych, K., Snoek, B. L., Elvin, M., Rodriguez, M., Van Der Velde, K. J., Arends, D., Westra, H-J., Swertz, M. A., Poulin, G., Kammenga, J. E., Breitling, R., Jansen, R. C. & Li, Y., 2017, In : PLoS ONE. 12, 2, e0171324.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
2 Citations (Scopus)

Temporal dynamics of gene expression in heat-stressed Caenorhabditis elegans

Jovic, K., Sterken, M. G., Grilli, J., Bevers, R. P. J., Rodriguez Sanchez, M., Riksen, J. A. G., Allesina, S., Kammenga, J. E. & Snoek, L. B., 11 Dec 2017, In : PLoS ONE. 12, 12, 16 p., e0189445.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
7 Citations (Scopus)

The background puzzle: how identical mutations in the same gene lead to different disease symptoms

Kammenga, J. E., 16 Oct 2017, In : FEBS Journal. 284, 20, p. 3362-3373

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
21 Citations (Scopus)

The molecular basis of natural variation in cold stress response in Caenorhabditis elegans

Stastna, J., Snoek, L. B., Nei, N., Wang, Y. A., Riksen, J. A. G., Kammenga, J. E. & Harvey, S. C., 21 Jun 2017.

Research output: Contribution to conferencePosterAcademic

Why do Individuals Differ in Viral Susceptibility? A Story Told by Model Organisms

van Sluijs, L., Pijlman, G. P. & Kammenga, J. E., 2017, In : Viruses. 9, 10, 284.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
4 Citations (Scopus)
2016

A new approach to aging research: Death as a tipping point

Jovic, K., Grilli, J., Snoek, L. B., Allesina, S. & Kammenga, J. E., 2016.

Research output: Contribution to conferencePosterAcademic

A new approach to aging research: Death as a tipping point

Jovic, K., Grilli, J., Snoek, L. B., Allesina, S. & Kammenga, J. E., 2016.

Research output: Contribution to conferencePosterAcademic

Contrasting invertebrate immune defense behaviors caused by a single gene, the Caenorhabditis elegans neuropeptide receptor gene npr-1

Nakad, R., Snoek, B., Yang, W., Ellendt, S., Schneider, F., Mohr, T. G., Rösingh, L., Masche, A. C., Rosenstiel, P. C., Dierking, K., Kammenga, J. E. & Schulenburg, H., 1 Dec 2016, In : BMC Genomics. 17, 1, 20 p., 280.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
16 Citations (Scopus)

Death as a tipping point: A new approach to aging research

Jovic, K., Grilli, J., Snoek, L. B., Allesina, S. & Kammenga, J. E., 2016, p. 140-140.

Research output: Contribution to conferencePosterAcademic

Discovery and identification of novel anti-viral alleles in Caenorhabditis elegans

van Sluijs, L., Sterken, M. G., Wang, Y. A., Snoek, L. B., Volkers, J. M., Riksen, J. A. G., Pijlman, G. P. & Kammenga, J. E., 2 Apr 2016.

Research output: Contribution to conferenceAbstract

Dissection of the genetic architecture in Caenorhabditis elegans underlying protein misfolding pathological mechanisms

Wang, Y. A., Sterken, M. G., Kammenga, J. E. & Harvey, S. C., May 2016, p. 236-236.

Research output: Contribution to conferencePosterAcademic

Open Access

Mixture toxicity: Linking approaches from ecological and human toxicology

van Gestel, C. A. M. (ed.), Jonker, M. J. (ed.), Kammenga, J. E. (ed.), Laskowski, R. (ed.) & Svendsen, C. (ed.), 19 Apr 2016, CRC Press. 269 p.

Research output: Book/ReportBook editingAcademic

13 Citations (Scopus)

Natural genetic variation differentially affects the proteome and transcriptome in Caenorhabditis elegans

Kamkina, P., Snoek, L. B., Grossmann, J., Volkers, R. J. M., Sterken, M. G., Daube, M., Roschitzki, B., Fortes, C., Schlapbach, R., Roth, A., von Mering, C., Hengartner, M. O., Schrimpf, S. P. & Kammenga, J. E., 2016, In : Molecular and Cellular Proteomics. 15, 5, p. 1670-1680

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
9 Citations (Scopus)

Natural Genetic Variation Influences Protein Abundances in C. elegans Developmental Signalling Pathways

Singh, K. D., Roschitzki, B., Snoek, B., Grossmann, J., Zheng, X., Elvin, M., Kamkina, P., Schrimpf, S. P., Poulin, G. B., Kammenga, J. E., Hengartner, M. O. & Rutherford, S. (ed.), 2016, In : PLoS ONE. 11, 3, e0149418.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
9 Citations (Scopus)

Natural Variation in Acute Stress Resistance, DR and Lifespan in a Multi-Parent Recombinant Inbred Line Panel in C. elegans

Stastna, J., Snoek, L. B., Riksen, J. A. G., Vujakovic, A., Schulenburg, H., Kammenga, J. E. & Harvey, S. C., May 2016.

Research output: Contribution to conferencePosterAcademic

Natural Variation in Stress Response in C. elegans using a Novel Recombinant Inbred Panel

Stastna, J., Snoek, L. B., Riksen, J. A. G., Vujakovic, A., Schulenburg, H., Kammenga, J. E. & Harvey, S. C., Jul 2016.

Research output: Contribution to conferenceAbstractAcademic