20032019

Research output per year

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Research Output

Report

Clustering of farms based on slaughterhouse health aberration data

Hulsegge, B. & de Greef, K. H., Jun 2017, Wageningen: Wageningen Livestock Research. 29 p. (Wageningen Livestock Research report; no. 1023)

Research output: Book/ReportReportProfessional

Open Access

Vroege detectie van dracht bij koeien door Proteomics Biomerkers in melk = Early pregnancy detection using proteomics biomarkers in milk

te Pas, M. F. W., Kruijt, L., de Wit, A. A. C., Hulsegge, B., van Riel, J. W., Heeres-van der Tol, J. J., Sulkers, H. & Woelders, H., 2014, Lelystad: Wageningen UR Livestock Research. 10 p. (Rapport / Wageningen UR Livestock Research; no. nr. 747)

Research output: Book/ReportReportProfessional

Open Access

Winning en opslag van sperma van zeldzame Nederlandse schapen- en geitenrassen in de genenbank (2001-2012)

Hoving, A. H., Sulkers, H., Zuidberg, C. A., Hulsegge, B., Woelders, H., de Wit, A. A. C. & Hiemstra, S. J., 2013, Lelystad: Centrum voor Genetische Bronnen Wageningen UR. 30 p. (CGN rapport / Centrum voor Genetische Bronnen Nederland; no. 29)

Research output: Book/ReportReportProfessional

Open Access
Poster
Open Access

DNA-test voor ras-identificatie van de zeldzame Nederlandse runderrassen

Hulsegge, B., Schoon, M., Windig, J. J., Hiemstra, S. J. & Schurink, A., 2019, p. 1-1. 1 p.

Research output: Contribution to conferencePoster

Open Access

Dutch gene bank for farm animals: beyond conserving genetic material

Schurink, A., Hulsegge, B., Windig, J. J., Hoving, A. H. & Hiemstra, S. J., 26 Aug 2019. 1 p.

Research output: Contribution to conferencePoster

Open Access
Open Access
Patent

Detection of proper insemination time by multiple pregnancy marker pattern (mpmp) recognition  

te Pas, M. F. W., Woelders, H., Bouwman, A. C. & Hulsegge, B., 21 Sep 2017, Patent No. WO2017158154, Priority date 18 Mar 2016

Research output: PatentOther research output

Open Access
Pamphlet

Cryoconservation of cattle breeds in the Netherlands

Woelders, H., Hulsegge, B., Sulkers, H., Hoving, A. H. & Hiemstra, S. J., 2009, Wageningen : Wageningen UR.

Research output: Other contributionPamphlet

Open Access

Cryoconservering van runderrassen in Nederland

Woelders, H., Hulsegge, B., Sulkers, H., Hoving, A. H. & Hiemstra, S. J., 2009, Wageningen : Wageningen UR.

Research output: Other contributionPamphlet

Open Access
Editorial

The EADGENE Microarray Data Analysis Workshop

de Koning, D. J., Jaffrezic, F., Lund, M. S., Watson, M., Channing, C., Hulsegge, B., Pool, M. H., Buitenhuis, B., Hedegaard, J., Hornshoj, H., Sorensen, P., Marot, G., Delmas, C., Lê Cao, K. A., San Cristobal, M., Baron, M. D., Malinverni, R., Stella, A., Brunner, R. M., Seyfert, H. M. & 12 others, Jensen, K., Mouzaki, D., Waddington, D., Jiménez-Marín, A., Perez-Alegre, M., Perez-Reinado, E., Closset, R., Detilleux, J. C., Dovc, P., Lavric, M., Nie, H. & Janss, L., 2007, In : Genetics, Selection, Evolution. 39, 6, p. 621-631

Research output: Contribution to journalEditorialAcademicpeer-review

Open Access
2 Citations (Scopus)
Conference paper

1000 Bull Genomes Consortium Project

Hayes, B. J., Fries, R., Lund, M. S., Boichard, D. A., Stothard, P., Veerkamp, R. F., Tassell, C., Anderson, C. L., Hulsegge, B., Guldbrandtsen, B., Rocha, D., Hinirichs, D., Bagnato, A., Georges, M., Spelman, R. J., Reecy, J. M., Archibald, A. L., Goddard, M. E. & Gredler, B., 2012, Plant and Animal Genome XX Conference, San Diego, CA, USA, 14-18 January 2012. W139

Research output: Chapter in Book/Report/Conference proceedingConference paper

1000 Bull Genomes - Toward genomic Selectionf from whole genome sequence Data in Dairy and Beef Cattle

Hayes, B., Daetwyler, H. D., Fries, R., Guldbrandtsen, B., Mogens Sando Lund, M., Didier A. Boichard, D. A., Stothard, P., Veerkamp, R. F., Hulsegge, B., Rocha, D., Tassell, C., Mullaart, E., Gredler, B., Druet, T., Bagnato, A., Goddard, M. E. & Chamberlain, H. L., 2013.

Research output: Contribution to conferenceConference paper

Background bias on cDNA micro-arrays

Pool, M. H., Hulsegge, B. & Janss, L. L. G., 2005.

Research output: Contribution to conferenceConference paper

Conserving a single gene versus overall genetic diversity with the help of optimal contributions

Windig, J. J., Hulsegge, B. & Engelsma, K. A., 2012, Book of Abstracts of the 63rd Annual Meeting of the European Association for Animal Production. Wageningen Academic Publishers, p. 11-11

Research output: Chapter in Book/Report/Conference proceedingConference paper

Open Access

Derivation of parentage and breed-of-origin of alleles in a crossbred broiler dataset

Calus, M. P. L., Vandenplas, J., Hulsegge, B., Borg, R., Henshall, J. & Hawken, R., 11 Feb 2018, Proceedings of the 11th World Congress on Genetics Applied to Livestock Production: Volume Species - Avian 2. WCGALP, 6 p. 320

Research output: Chapter in Book/Report/Conference proceedingConference paper

Open Access

Genomic predictions for dry matter intake using the international reference population of gDMI

de Haas, Y., Pryce, J. E., Calus, M. P. L., Hulsegge, B., Spurlock, D. M., Berry, D. P., Wall, E., Lovendahl, P., Weigel, K., MacDonald, K., Miglior, F., Krattenmacher, N. & Veerkamp, R. F., 2014, Proceedings of the The 2014 Interbull Meeting. Vol. 48. p. 94-99

Research output: Chapter in Book/Report/Conference proceedingConference paper

Open Access

Genotype imputation accuracy in Holstein Friesian cattle in case of whole-genome sequence data

van Binsbergen, R., Bink, M. C. A. M., Calus, M. P. L., van Eeuwijk, F. A., Hayes, B. J., Hulsegge, B. & Veerkamp, R. F., 2013, Book of Abstracts of the 64th Annual Meeting of the European Federation of Animal Science, Nantes, France 26-30 August 2013. Wageningen Academic Publishers, Vol. 19. p. 225-225

Research output: Chapter in Book/Report/Conference proceedingConference paper

Open Access

Globaltest and GOEAST: two different approaches for Gene Ontology analysis

Hulsegge, B., Kommadath, A. & Smits, M. A., 2009, p. S10.

Research output: Contribution to conferenceConference paper

Open Access

Pathway analysis: Combining microarray data and physiological data to study myogenesis

te Pas, M. F. W., Hulsegge, B. & Pool, M. H., 2007, COST Action 925: "The importance of prenatal events for postnatal mucle growth in relation to the quality of muscle based foods", 3rd Work Group meeting , Antalya, Turkey, in collaboration with the Physiology Commission of the EAAP, 21st - 22nd September 2006. Berlin: Akademie Verlag, p. 27-31

Research output: Chapter in Book/Report/Conference proceedingConference paper

Open Access
Open Access

Pathway analysis of Microarray data

te Pas, M. F. W., Hulsegge, B., Pool, M. H., Rebel, J. M. J. & van Hemert, S., 2006.

Research output: Contribution to conferenceConference paper

Pathways analysis of Microarray data

te Pas, M. F. W., Hulsegge, B., Pool, M. H., Rebel, J. M. J. & van Hemert, S., 2006.

Research output: Contribution to conferenceConference paper

Pathways analysis of microarrays

te Pas, M. F. W., Hulsegge, B. & Smits, M. A., 2006.

Research output: Contribution to conferenceConference paper

The value of conserved samples in gene banks for animal breeding in the MRIJ cattle breed

Eynard, S. E., Calus, M. P. L., Hulsegge, I., Hiemstra, S. J. & Windig, J. J., 2018, Proceedings of the World Congress on Genetics Applied to Livestock Production: Volume Challenges - Species Conservation. WCGALP, 5 p. 191

Research output: Chapter in Book/Report/Conference proceedingConference paper

Open Access

Toward genomic prediction from genome sequence data and the 1000 bull genomes project

Hayes, B., Anderson, C. L., Daetwyler, H. D., Fries, R., Guldbrandtsen, B., Lund, M., Boichard, D. A., Stothard, P., Veerkamp, R. F., Hulsegge, B., Rocha, D., Tassell, C., Coote, D., Goddard, M. E. & The 1000 Bull Genomes Consortium, 2012, 4th International Conference of Quantative Genetics. p. 55-55

Research output: Chapter in Book/Report/Conference proceedingConference paper

Open Access

Towards Uniform Gene Bank Documentation In Europe – The Experience From The EFABISnet Project

Duchev, Z. I., Gandini, G., Berger, B., Hulsegge, B., Hiemstra, S. J., Maki-Tanila, A., Gorjanc, G., Dýrmundsson, O., Oravcova, M., Marguerat-König, C., Viinalass, H. & Groeneveld, E., 2010.

Research output: Contribution to conferenceConference paper

Open Access
Chapter

From Visual Biological Models Toward Mathematical Models of the Biology of Complex Traits

te Pas, M. F. W., Hoekman, A. J. W. & Hulsegge, B., 2011, System Biology and Livestock Science. John Wiley and Sons, p. 137-160 332 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

1 Citation (Scopus)
Book

Ontology. An ontology for host pathogen interactions in farm animals

Hulsegge, B., 2010, Wageningen: Animal Breeding and Genetics (ABG-80436). (Major thesis; no. ABG-80436)

Research output: Book/ReportBookAcademic

Article

Accuracy of imputation to whole-genome sequence data in Holstein Friesian cattle

van Binsbergen, R., Bink, M. C. A. M., Calus, M. P. L., van Eeuwijk, F. A., Hayes, B. J., Hulsegge, B. & Veerkamp, R. F., 2014, In : Genetics, Selection, Evolution. 46, 25 p., 41.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
64 Citations (Scopus)

Analysis of a simulated microarray dataset: Comparison of methods for data normalisation and detection of differntial expression

Watson, M., Perez-Alegre, M., Denis Baron, M., Delmas, C., Dovc, P., Duval, M., Foulley, J. L., Garrido-Pavon, J. J., Hulsegge, B., Jafrezic, F., Jiménez-Marín, A., Lavric, M., Lê Cao, K. A., Marot, G., Mouzaki, D., Pool, M. H., Robert-Granié, C., San Cristobal, M., Tosser-Klop, G., Waddington, D. & 1 others, de Koning, D. J., 2007, In : Genetics, Selection, Evolution. 39, 6, p. 669-683

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
3 Citations (Scopus)

Analysis of the differential transcriptome expression profiles during prenatal muscle tissue development in pigs (workshop contribution)

te Pas, M. F. W., Pool, M. H., Hulsegge, B. & Janss, L. L. G., 2006, In : Archiv fuer Tierzucht. 49, p. 110-115

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Analysis of the real EADGENE data set: Comparison of methods and guidelines for data normalisation and selection of differentially expressed genes

Jafrezic, F., de Koning, D. J., Boettcher, P., Bonnet, A., Buitenhuis, B., Closset, R., Dejean, S., Delmas, C., Detilleux, J. C., Dovc, P., Duval, M., Foulley, J. L., Hedegaard, J., Hoprnshoj, H., Hulsegge, B., Janss, L., Jensen, K., Jiang, L., Lavric, M., Cao Le, K. A. & 18 others, Lund, M. S., Malinverni, R., Marot, G., Nie, H., Petzl, W., Pool, M. H., Robert-Granie, C., Cristobal, M., van Schothorst, E. M., Schuberth, H. J., Sorensen, P., Stella, A., Tosser-klopp, G., Waddington, D., Watson, M., Yang, M., Zerbe, H. & Seyfert, H. M., 2007, In : Genetics, Selection, Evolution. 39, p. 633-650

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
11 Citations (Scopus)

Analysis of the real EADGENE data set: Multivariate approaches and post analyis

Sorensen, P., Bonnet, A., Buitenhuis, B., Closset, R., Dejean, S., Delmas, C., Duval, M., Glass, L., Hedegaard, J., Hornshoj, H., Hulsegge, B., Jaffrezic, F., Jensen, K., Jiang, L., de Koning, D. J., Lê Cao, K. A., Nie, H., Petzl, W., Pool, M. H., Robert-Granie, C. & 10 others, San Cristobal, M., Lund, M. S., van Schothorst, E. M., Schuberth, H. J., Seyfert, H. M., Tosser-klopp, G., Waddington, D., Watson, D., Yang, W. & Zerbe, H., 2007, In : Genetics, Selection, Evolution. 39, 6, p. 651-668

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

A Pathway Analysis Tool for Analyzing Microarray Data of Species with Low Physiological Information

te Pas, M. F. W., van Hemert, S., Hulsegge, B., Hoekman, A. J. W., Pool, M. H., Rebel, J. M. J. & Smits, M. A., 2008, In : Advances in Bioinformatics. 2008, p. 719468 7 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Assessment of sire contribution and breed-of-origin of alleles in a three-way crossbred broiler dataset

Calus, M. P. L., Vandenplas, J., Hulsegge, I., Borg, R., Henshall, J. M. & Hawken, R., 1 Dec 2019, In : Poultry Science. 98, 12, p. 6270-6280 11 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

A time-series approach for clustering farms based on slaughterhouse health aberration data

Hulsegge, I. & de Greef, K. H., 1 May 2018, In : Preventive Veterinary Medicine. 153, p. 64-70

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Biochemical pathways analysis of microarray results: regulation of myogenesis in pigs

te Pas, M. F. W., Hulsegge, B., Coster, A., Pool, M. H., Heuven, H. C. M. & Janss, L. L. G., 2007, In : BMC Developmental Biology. 7, 15 p., 66.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
46 Citations (Scopus)

Boosted trees to predict pneumonia, growth, and meat percentage of growing-finishing pigs

Mollenhorst, H., Ducro, B. J., de Greef, K. H., Hulsegge, I. & Kamphuis, C., 3 Oct 2019, In : Journal of Animal Science. 97, 10, p. 4152-4159

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
1 Citation (Scopus)
Open Access
3 Citations (Scopus)

Contributions to an animal trait ontology

Hulsegge, B., Smits, M. A., te Pas, M. F. W. & Woelders, H., 2012, In : Journal of Animal Science. 90, 6, p. 2061-2066

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
4 Citations (Scopus)

Decision support system with semantic model to assess the risk of tail biting in pigs. 1. Modelling

Bracke, M. B. M., Hulsegge, B., Blokhuis, H. J. & Keeling, L., 2004, In : Applied Animal Behaviour Science. 87, p. 31-44

Research output: Contribution to journalArticleAcademicpeer-review

44 Citations (Scopus)

Decision support system with semantic model to assess the risk of tail biting in pigs. 2. 'Validation'

Bracke, M. B. M., Keeling, L., Blokhuis, H. J. & Hulsegge, B., 2004, In : Applied Animal Behaviour Science. 87, 1-2, p. 45-54

Research output: Contribution to journalArticleAcademicpeer-review

20 Citations (Scopus)

Development of a genetic tool for determining breed purity of cattle

Hulsegge, I., Schoon, M., Windig, J., Neuteboom, M., Hiemstra, S. J. & Schurink, A., 1 May 2019, In : Livestock Science. 223, p. 60-67 8 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
2 Citations (Scopus)

DNA-onderzoek beantwoordt veel vragen over het Roodbont Fries Vee

Oldenbroek, J. K., Calus, M. P. L., Windig, J. J. & Hulsegge, B., 2014, In : Zeldzaam huisdier. 39, 3, p. 12-15

Research output: Contribution to journalArticleProfessional

Open Access