20032019

Research output per year

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Research Output

1000 Bull Genomes Consortium Project

Hayes, B. J., Fries, R., Lund, M. S., Boichard, D. A., Stothard, P., Veerkamp, R. F., Tassell, C., Anderson, C. L., Hulsegge, B., Guldbrandtsen, B., Rocha, D., Hinirichs, D., Bagnato, A., Georges, M., Spelman, R. J., Reecy, J. M., Archibald, A. L., Goddard, M. E. & Gredler, B., 2012, Plant and Animal Genome XX Conference, San Diego, CA, USA, 14-18 January 2012. W139

Research output: Chapter in Book/Report/Conference proceedingConference paper

1000 Bull Genomes - Toward genomic Selectionf from whole genome sequence Data in Dairy and Beef Cattle

Hayes, B., Daetwyler, H. D., Fries, R., Guldbrandtsen, B., Mogens Sando Lund, M., Didier A. Boichard, D. A., Stothard, P., Veerkamp, R. F., Hulsegge, B., Rocha, D., Tassell, C., Mullaart, E., Gredler, B., Druet, T., Bagnato, A., Goddard, M. E. & Chamberlain, H. L., 2013.

Research output: Contribution to conferenceConference paperAcademic

Accuracy of imputation to whole-genome sequence data in Holstein Friesian cattle

van Binsbergen, R., Bink, M. C. A. M., Calus, M. P. L., van Eeuwijk, F. A., Hayes, B. J., Hulsegge, B. & Veerkamp, R. F., 2014, In : Genetics, Selection, Evolution. 46, 25 p., 41.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
63 Citations (Scopus)

Analysis of a simulated microarray dataset: Comparison of methods for data normalisation and detection of differntial expression

Watson, M., Perez-Alegre, M., Denis Baron, M., Delmas, C., Dovc, P., Duval, M., Foulley, J. L., Garrido-Pavon, J. J., Hulsegge, B., Jafrezic, F., Jiménez-Marín, A., Lavric, M., Lê Cao, K. A., Marot, G., Mouzaki, D., Pool, M. H., Robert-Granié, C., San Cristobal, M., Tosser-Klop, G., Waddington, D. & 1 others, de Koning, D. J., 2007, In : Genetics, Selection, Evolution. 39, 6, p. 669-683

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
3 Citations (Scopus)

Analysis of the differential transcriptome expression profiles during prenatal muscle tissue development in pigs (workshop contribution)

te Pas, M. F. W., Pool, M. H., Hulsegge, B. & Janss, L. L. G., 2006, In : Archiv fuer Tierzucht. 49, p. 110-115

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Analysis of the real EADGENE data set: Comparison of methods and guidelines for data normalisation and selection of differentially expressed genes

Jafrezic, F., de Koning, D. J., Boettcher, P., Bonnet, A., Buitenhuis, B., Closset, R., Dejean, S., Delmas, C., Detilleux, J. C., Dovc, P., Duval, M., Foulley, J. L., Hedegaard, J., Hoprnshoj, H., Hulsegge, B., Janss, L., Jensen, K., Jiang, L., Lavric, M., Cao Le, K. A. & 18 others, Lund, M. S., Malinverni, R., Marot, G., Nie, H., Petzl, W., Pool, M. H., Robert-Granie, C., Cristobal, M., van Schothorst, E. M., Schuberth, H. J., Sorensen, P., Stella, A., Tosser-klopp, G., Waddington, D., Watson, M., Yang, M., Zerbe, H. & Seyfert, H. M., 2007, In : Genetics, Selection, Evolution. 39, p. 633-650

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
11 Citations (Scopus)

Analysis of the real EADGENE data set: Multivariate approaches and post analyis

Sorensen, P., Bonnet, A., Buitenhuis, B., Closset, R., Dejean, S., Delmas, C., Duval, M., Glass, L., Hedegaard, J., Hornshoj, H., Hulsegge, B., Jaffrezic, F., Jensen, K., Jiang, L., de Koning, D. J., Lê Cao, K. A., Nie, H., Petzl, W., Pool, M. H., Robert-Granie, C. & 10 others, San Cristobal, M., Lund, M. S., van Schothorst, E. M., Schuberth, H. J., Seyfert, H. M., Tosser-klopp, G., Waddington, D., Watson, D., Yang, W. & Zerbe, H., 2007, In : Genetics, Selection, Evolution. 39, 6, p. 651-668

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

A Pathway Analysis Tool for Analyzing Microarray Data of Species with Low Physiological Information

te Pas, M. F. W., van Hemert, S., Hulsegge, B., Hoekman, A. J. W., Pool, M. H., Rebel, J. M. J. & Smits, M. A., 2008, In : Advances in Bioinformatics. 2008, p. 719468 7 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Assessment of sire contribution and breed-of-origin of alleles in a three-way crossbred broiler dataset

Calus, M. P. L., Vandenplas, J., Hulsegge, I., Borg, R., Henshall, J. M. & Hawken, R., 1 Dec 2019, In : Poultry Science. 98, 12, p. 6270-6280 11 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

A time-series approach for clustering farms based on slaughterhouse health aberration data

Hulsegge, I. & de Greef, K. H., 1 May 2018, In : Preventive Veterinary Medicine. 153, p. 64-70

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Background bias on cDNA micro-arrays

Pool, M. H., Hulsegge, B. & Janss, L. L. G., 2005.

Research output: Contribution to conferenceConference paperAcademic

Biochemical pathways analysis of microarray results: regulation of myogenesis in pigs

te Pas, M. F. W., Hulsegge, B., Coster, A., Pool, M. H., Heuven, H. C. M. & Janss, L. L. G., 2007, In : BMC Developmental Biology. 7, 15 p., 66.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
46 Citations (Scopus)

Boosted regression trees to predict pneumonia, growth and meat percentage of slaughter pigs

Mollenhorst, H., de Greef, K. H., Ducro, B. J., Hulsegge, B., Hoving, A. H., Veerkamp, R. F. & Kamphuis, C., 27 Aug 2018, Book of Abstracts of the 69th Annual Meeting of the European Federation of Animal Science. Wageningen: Wageningen Academic Publishers, p. 437-437 (Book of abstracts; no. 24).

Research output: Chapter in Book/Report/Conference proceedingAbstract

Boosted trees to predict pneumonia, growth, and meat percentage of growing-finishing pigs

Mollenhorst, H., Ducro, B. J., de Greef, K. H., Hulsegge, I. & Kamphuis, C., 3 Oct 2019, In : Journal of Animal Science. 97, 10, p. 4152-4159

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
1 Citation (Scopus)

Clustering of farms based on slaughterhouse health aberration data

Hulsegge, B. & de Greef, K. H., Jun 2017, Wageningen: Wageningen Livestock Research. 29 p. (Wageningen Livestock Research report; no. 1023)

Research output: Book/ReportReportProfessional

Open Access
Open Access
3 Citations (Scopus)

Conserving a single gene versus overall genetic diversity with the help of optimal contributions

Windig, J. J., Hulsegge, B. & Engelsma, K. A., 2012, Book of Abstracts of the 63rd Annual Meeting of the European Association for Animal Production. Wageningen Academic Publishers, p. 11-11

Research output: Chapter in Book/Report/Conference proceedingConference paper

Open Access

Contributions to an animal trait ontology

Hulsegge, B., Smits, M. A., te Pas, M. F. W. & Woelders, H., 2012, In : Journal of Animal Science. 90, 6, p. 2061-2066

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
3 Citations (Scopus)

Cryoconservation of cattle breeds in the Netherlands

Woelders, H., Hulsegge, B., Sulkers, H., Hoving, A. H. & Hiemstra, S. J., 2009, Wageningen : Wageningen UR.

Research output: Other contributionPamphlet

Open Access

Cryoconservering van runderrassen in Nederland

Woelders, H., Hulsegge, B., Sulkers, H., Hoving, A. H. & Hiemstra, S. J., 2009, Wageningen : Wageningen UR.

Research output: Other contributionPamphlet

Open Access

Decision support system with semantic model to assess the risk of tail biting in pigs. 1. Modelling

Bracke, M. B. M., Hulsegge, B., Blokhuis, H. J. & Keeling, L., 2004, In : Applied Animal Behaviour Science. 87, p. 31-44

Research output: Contribution to journalArticleAcademicpeer-review

44 Citations (Scopus)

Decision support system with semantic model to assess the risk of tail biting in pigs. 2. 'Validation'

Bracke, M. B. M., Keeling, L., Blokhuis, H. J. & Hulsegge, B., 2004, In : Applied Animal Behaviour Science. 87, 1-2, p. 45-54

Research output: Contribution to journalArticleAcademicpeer-review

20 Citations (Scopus)

Delineating spatio-temporal processes in the gut mucosa of pigs

Hulsegge, B., Rebel, J. M. J., Schokker, D. & Smits, M. A., 2016, Book of Abstracts of the 67th Annual Meeting of the European Federation of Animal Science: EAAP – 67th Annual Meeting, Belfast 201. Wageningen: Wageningen Academic Publishers, p. 542-542 (Book of abstracts; no. 22).

Research output: Chapter in Book/Report/Conference proceedingAbstract

Open Access

Derivation of parentage and breed-of-origin of alleles in a crossbred broiler dataset

Calus, M. P. L., Vandenplas, J., Hulsegge, B., Borg, R., Henshall, J. & Hawken, R., 11 Feb 2018, Proceedings of the 11th World Congress on Genetics Applied to Livestock Production: Volume Species - Avian 2. WCGALP, 6 p. 320

Research output: Chapter in Book/Report/Conference proceedingConference paper

Open Access

Detection of proper insemination time by multiple pregnancy marker pattern (mpmp) recognition  

te Pas, M. F. W., Woelders, H., Bouwman, A. C. & Hulsegge, B., 21 Sep 2017, Patent No. WO2017158154, Priority date 18 Mar 2016

Research output: PatentOther research output

Open Access

Determining breed purity in local Dutch cattle with a DNA test to increase number of breeding animals

Hulsegge, B., Windig, J. J., Hiemstra, S. J. & Schurink, A., 26 Aug 2019. 18 p.

Research output: Contribution to conferencePosterAcademic

Open Access

Determining Networks of pathways from microarray data: chicken intestine reaction to Salmonella enteritidis infection as an example

te Pas, M. F. W., van Hemert, S., Hulsegge, B., Pool, M. H. & Rebel, J. M. J., 2007.

Research output: Contribution to conferenceConference paperAcademic

Development of a genetic tool for determining breed purity of cattle

Hulsegge, I., Schoon, M., Windig, J., Neuteboom, M., Hiemstra, S. J. & Schurink, A., 1 May 2019, In : Livestock Science. 223, p. 60-67 8 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
1 Citation (Scopus)

Diverse ways to visualize microarray data on physiological pathways increases insight

te Pas, M. F. W. & Hulsegge, B., 2009, 18th Annual Growth Factor and Signal Transduction Symposium, Ames Iowa USA 11-6-2009 tm 14-06-2009. p. 27-27

Research output: Chapter in Book/Report/Conference proceedingAbstract

DNA-onderzoek beantwoordt veel vragen over het Roodbont Fries Vee

Oldenbroek, J. K., Calus, M. P. L., Windig, J. J. & Hulsegge, B., 2014, In : Zeldzaam huisdier. 39, 3, p. 12-15

Research output: Contribution to journalArticleProfessional

Open Access

DNA-test voor ras-identificatie van de zeldzame Nederlandse runderrassen

Hulsegge, B., Schoon, M., Windig, J. J., Hiemstra, S. J. & Schurink, A., 2019, p. 1-1. 1 p.

Research output: Contribution to conferencePosterProfessional

Open Access

Dutch gene bank for farm animals: beyond conserving genetic material

Schurink, A., Hulsegge, B., Windig, J. J., Hoving, A. H. & Hiemstra, S. J., 26 Aug 2019. 1 p.

Research output: Contribution to conferencePosterAcademic

Open Access

Effects of housing conditions of slaughter pigs on some post mortem muscle metabolites and pork quality characteristics

Lambooij, E., Hulsegge, B., Klont, R. E., Winkelman-Goedhart, H. A., Reimert, H. G. M. & Kranen, R. W., 2004, In : Meat Science. 66, p. 855-862

Research output: Contribution to journalArticleAcademicpeer-review

23 Citations (Scopus)

From Visual Biological Models Toward Mathematical Models of the Biology of Complex Traits

te Pas, M. F. W., Hoekman, A. J. W. & Hulsegge, B., 2011, System Biology and Livestock Science. John Wiley and Sons, p. 137-160 332 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

1 Citation (Scopus)

Functional analysis of inter-individual transcriptome differential expression in pig longissimus muscle

Zhao, S., Hulsegge, B., Harders, F. L., Bossers, R., Keuning, E., Hoekman, A. J. W., Hoving-Bolink, A. H. & te Pas, M. F. W., 2013, In : Journal of Animal Breeding and Genetics. 130, 1, p. 72-78

Research output: Contribution to journalArticleAcademicpeer-review

4 Citations (Scopus)

Genetic analysis to support the re-establishment of the Kempen breed

Francois, L., Janssens, S., Colinet, F. G., Gengler, N., Hulsegge, B., Windig, J. J. & Buys, N., 2015, Book of Abstracts 66th Annual Meeting of the European Federation of Animal Science. Wageningen: Wageningen Academic Publishers, Vol. 21. p. 99-99

Research output: Chapter in Book/Report/Conference proceedingAbstract

Genomic prediction for dry matter intake of dairy cattle from an international data set consisting of research herds in Europe, North America and Australasia

de Haas, Y., Pryce, J. E., Calus, M. P. L., Wall, E., Berry, D. P., Lovendahl, P., Krattenmacher, N., Miglior, F., Weigel, K., Spurlock, D., MacDonald, K. A., Hulsegge, B. & Veerkamp, R. F., 2015, In : Journal of Dairy Science. 98, 9, p. 6522-6534

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
29 Citations (Scopus)

Genomic predictions for dry matter intake using the international reference population of gDMI

de Haas, Y., Pryce, J. E., Calus, M. P. L., Hulsegge, B., Spurlock, D. M., Berry, D. P., Wall, E., Lovendahl, P., Weigel, K., MacDonald, K., Miglior, F., Krattenmacher, N. & Veerkamp, R. F., 2014, Proceedings of the The 2014 Interbull Meeting. Vol. 48. p. 94-99

Research output: Chapter in Book/Report/Conference proceedingConference paper

Open Access

Genomics of a revived breed: Case study of the Belgian campine cattle

François, L., Wijnrocx, K., Coline, F. G., Gengler, N., Hulsegge, I., Windig, J. J., Buys, N. & Janssens, S., 2017, In : PLoS ONE. 12, 4, e0175916.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
7 Citations (Scopus)

Genotype imputation accuracy in Holstein Friesian cattle in case of whole-genome sequence data

van Binsbergen, R., Bink, M. C. A. M., Calus, M. P. L., van Eeuwijk, F. A., Hayes, B. J., Hulsegge, B. & Veerkamp, R. F., 2013, Book of Abstracts of the 64th Annual Meeting of the European Federation of Animal Science, Nantes, France 26-30 August 2013. Wageningen Academic Publishers, Vol. 19. p. 225-225

Research output: Chapter in Book/Report/Conference proceedingConference paper

Open Access

Global Perspectives on animal trait ontology

Reecy, J. M., Park, C. A., Hu, Z. L., Hulsegge, B., van der Steen, H. A. M. & Hocquette, J. F., 2009, Book of abstracts of the 60th Annual Meeting of the European Association for Animal Production, Barcelona Spain, 24-27 August 2009. Wageningen: Wageningen Academic Publishers, p. 319-319

Research output: Chapter in Book/Report/Conference proceedingAbstract

Open Access

Globaltest and GOEAST: two different approaches for Gene Ontology analysis

Hulsegge, B., Kommadath, A. & Smits, M. A., 2009, p. S10.

Research output: Contribution to conferenceConference paperAcademicpeer-review

Open Access

Impact of merging commercial breeding lines on the genetic diversity of Landrace pigs

Hulsegge, I., Calus, M., Hoving-Bolink, R., Lopes, M., Megens, H. J. & Oldenbroek, K., 29 Oct 2019, In : Genetics Selection Evolution. 51, 1, 60.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Impact of merging different commercial lines on genetic diversity of the Dutch Landrace pigs

Hulsegge, B., Calus, M. P. L., Hoving-Bolink, A. H., Lopes, M. S., Megens, H. J. W. C. & Oldenbroek, J. K., 27 Aug 2018, Book of Abstracts of the 69th Annual Meeting of the European Federation of Animal Science. Wageningen: Wageningen Academic Publishers, p. 554-554 (Book of abstracts; no. 24).

Research output: Chapter in Book/Report/Conference proceedingAbstract

Improving genomic prediction in numerically small Red dairy cattle populations

Marjanovic, J., Hulsegge, B., Schurink, A. & Calus, M. P. L., 27 Aug 2018, Book of Abstracts of the 69th Annual Meeting of the European Federation of Animal Science. Wageningen: Wageningen Academic Publishers, p. 121-121 (Book of abstracts; no. 24).

Research output: Chapter in Book/Report/Conference proceedingAbstract

Integrating genomic data in National Genebanks for targeted re-use of collections

Groeneveld, E., Hulsegge, B. & Hiemstra, S. J., 2015, Book of Abstracts of the 66th Annual Meeting of the European Association for Animal Production. Wageningen: Wageningen Academic Publishers, Vol. 21. p. 104-104

Research output: Chapter in Book/Report/Conference proceedingAbstract

Longissimus muscle transcriptome profiles related to carcass and meat quality traits in fresh meat Pietrain carcasses

te Pas, M. F. W., Keuning, E., Hulsegge, B., Hoving-Bolink, A. H., Evans, G. & Mulder, H. A., 2010, In : Journal of Animal Science. 88, 12, p. 4044-4055

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
22 Citations (Scopus)

Lying characteristics as determinants for space requirements in pigs

Ekkel, E. D., Spoolder, H. A. M., Hulsegge, B. & Hopster, H., 2003, In : Applied Animal Behaviour Science. 80, p. 19-30

Research output: Contribution to journalArticleAcademicpeer-review

84 Citations (Scopus)

Meta-analysis of Chicken - Salmonella infection experiments

te Pas, M. F. W., Hulsegge, B., Schokker, D. J., Smits, M. A., Fife, M., Zoorob, R., Endale, M. L. & Rebel, J. M. J., 2012, In : BMC Genomics. 13, 28 p., 146.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
9 Citations (Scopus)