Hendrik-Jan Megens

Search results

• Data from: Genome-wide single nucleotide polymorphism analysis reveals recent genetic introgression from domestic pigs into Northwest European wild boar populations

  Goedbloed, D. J. (Creator), Megens, H. (Creator), van Hooft, P. (Creator), Herrero-Medrano, J. (Creator), Lutz, W. (Creator), Alexandri, P. (Creator), Crooijmans, R. (Creator), Groenen, M. A. M. (Creator), van Wieren, S. E. (Creator), Ydenberg, R. C. (Creator) & Prins, H. (Creator), Wageningen UR, 14 May 2012

  DOI: 10.5061/dryad.v6f1g

  Dataset

• Using genome-wide measures of coancestry to maintain diversity and fitness in endangered and domestic pig populations

  Bosse, M. (Creator), Megens, H. (Creator), Madsen, O. (Creator), Crooijmans, R. (Creator), Ryder, O. A. (Creator), Austerlitz, F. (Creator), Groenen, M. A. M. (Creator) & de Cara, M. A. R. (Creator), Wageningen University, 13 May 2015

  https://www.ebi.ac.uk/ena/data/view/PRJEB9326

  Dataset

• Whole Genome SNP Discovery and Analysis of Genetic Diversity in Turkey (Meleagris gallopavo)

  Aslam, M. L. (Creator), Bastiaansen, J. (Creator), Elferink, M. G. (Creator), Megens, H. (Creator), Crooijmans, R. (Creator), Blomberg, L. A. (Creator), Fleischer, R. C. (Creator), van Tassell, C. P. (Creator), Sonstegard, T. S. (Creator), Schroeder, S. G. (Creator), Groenen, M. A. M. (Creator) & Long, J. A. (Creator), Wageningen University, 4 Feb 2014

  https://www.ncbi.nlm.nih.gov//bioproject/PRJNA237339

  Dataset

• Supporting data for "A new haplotype-resolved turkey genome to enable turkey genetics and genomics research"

  Barros, C. P. (Creator), Derks, M. (Creator), Mohr, J. (Creator), Wood, B. J. (Creator), Crooijmans, R. (Creator), Megens, H. (Creator), Bink, M. C. A. M. (Creator) & Groenen, M. A. M. (Creator), Wageningen University & Research, 13 Jun 2023

  DOI: 10.5524/102394

  Dataset

• Data from: The effects of recent changes in breeding preferences on maintaining traditional Dutch chicken genomic diversity

  Bortoluzzi, C. (Creator), Crooijmans, R. (Creator), Bosse, M. (Creator), Hiemstra, S. J. (Creator), Groenen, M. A. M. (Creator) & Megens, H. (Creator), Wageningen University & Research, 8 Mar 2018

  DOI: 10.5061/dryad.1d832h3

  Dataset

• Gallus gallus D-loop, partial sequence; mitochondrial

  Mullu, N. D. (Creator), Megens, H. (Creator), Crooijmans, R. (Creator), Hanotte, O. (Creator), Mwacharo, J. (Creator), Groenen, M. A. M. (Creator) & van Arendonk, J. A. M. (Creator), Wageningen University & Research, 14 Mar 2011

  https://www.ncbi.nlm.nih.gov/popset/295917202

  Dataset

• Signatures of Diversifying Selection in European Pig Breeds

  Wilkinson, S. (Creator), Lu, Z. H. (Creator), Megens, H. (Creator), Archibald, A. L. (Creator), Haley, C. (Creator), Jackson, I. J. (Creator), Groenen, M. A. M. (Creator), Crooijmans, R. (Creator), Ogden, R. (Creator) & Wiener, P. (Creator), Wageningen UR, 2013

  DOI: 10.5061/dryad.c2124

  Dataset

• Indexed pPHRED summary scores

  Gross, C. (Creator), Derks, M. (Creator), Megens, H. (Creator), Bosse, M. (Creator), Groenen, M. A. M. (Creator), Reinders, M. (Creator) & de Ridder, D. (Creator), Wageningen University & Research, 2020

  http://www.bioinformatics.nl/pCADD/indexed_pPHRED-summary-scores/

  Dataset

• Autosomal dwarfism study in chicken

  Wu, Z. (Creator), Derks, M. (Creator), Dibbits, B. (Creator), Megens, H. (Creator), Groenen, M. A. M. (Creator) & Crooijmans, R. (Creator), Wageningen University & Research, 16 May 2018

  https://www.ebi.ac.uk/ena/data/view/PRJEB25937

  Dataset

• Sus cebifrons genome assembly

  Liu, L. (Creator), Megens, H. (Creator), Crooijmans, R. (Creator) & Bosse, M. (Creator), Wageningen University and Research Centre, 28 Apr 2022

  Dataset

• WGS of pygmy hog and Babyrousa babyrussa

  Liu, L. (Creator), Bosse, M. (Creator), Megens, H. (Creator), Frantz, L. A. F. (Creator), Lee, Y. L. (Creator), Irving-Pease, E. K. (Creator), Narayan, G. (Creator), Groenen, M. A. M. (Creator) & Madsen, O. (Creator), Wageningen University & Research, 30 Apr 2019

  https://www.ebi.ac.uk/ena/data/view/PRJEB30129

  Dataset

• Wolbachia endosymbiont of Operophtera brumata strain:Ob_Wba Genome sequencing and assembly

  Derks, M. (Creator), Smit, S. (Creator), Salis, L. (Creator), Schijlen, E. (Creator), Bossers, A. (Creator), Mateman, C. (Creator), Pijl, A. S. (Creator), de Ridder, D. (Creator), Groenen, M. A. M. (Creator), Visser, M. E. (Creator) & Megens, H. (Creator), Wageningen University & Research, 11 Aug 2015

  https://www.ncbi.nlm.nih.gov/bioproject/276497

  Dataset

• Data from: Genome-wide SNP data unveils the globalization of domesticated pigs

  Yang, B. (Creator), Cui, L. (Creator), Pérez-Enciso, M. (Creator), Traspov, A. (Creator), Crooijmans, R. (Creator), Zinovieva, N. (Creator), Schook, L. B. (Creator), Gatphayak, K. (Creator), Knorr, C. (Creator), Triantafyllidis, A. (Creator), Alexandri, P. (Creator), Semiadi, G. (Creator), Hanotte, O. (Creator), Dias, D. (Creator), Dovč, P. (Creator), Uimari, P. (Creator), Iacolina, L. (Creator), Scandura, M. (Creator), Groenen, M. A. M. (Creator), Huang, L. (Creator) & Megens, H. (Creator), National Key Laboratory for Pig Genetic Improvement and Production Technology, 25 Sept 2017

  DOI: 10.5061/dryad.30tk6

  Dataset

• Genomic consequences of a century of inbreeding and isolation in the Danish wild boar population

  Yıldız, B. (Creator), Megens, H. (Creator), Hvilsom, C. (Creator) & Bosse, M. (Creator), Netherlands Institute of Ecology (NIOO-KNAW), 9 May 2022

  DOI: 10.5061/dryad.905qfttnc

  Dataset

• Detection of a frameshift deletion in the SPTBN4 gene leads to prevention of severe myopathy and postnatal mortality in pigs

  Derks, M. (Creator), Harlizius, B. (Creator), Lopez, M. S. (Creator), Greijdanus-van der Putten, S. (Creator), Dibbits, B. (Creator), Laport, K. (Creator), Megens, H. (Creator) & Groenen, M. A. M. (Creator), Wageningen University, 16 Jul 2019

  DOI: 10.17605/osf.io/em2db

  Dataset

• Data from: Global lack of flyway structure in a cosmopolitan bird revealed by a genome wide survey of single nucleotide polymorphisms

  Kraus, R. (Creator), van Hooft, P. (Creator), Megens, H. (Creator), Tsvey, A. (Creator), Fokin, S. Y. (Creator), Ydenberg, R. (Creator) & Prins, H. (Creator), Wageningen University & Research, 11 Oct 2012

  DOI: 10.5061/dryad.1bq39

  Dataset

• Operophtera brumata isolate:WM2013NL Genome sequencing and assembly

  Derks, M. (Creator), Smit, S. (Creator), Salis, L. (Creator), Schijlen, E. (Creator), Bossers, A. (Creator), Mateman, C. (Creator), Pijl, A. S. (Creator), de Ridder, D. (Creator), Groenen, M. A. M. (Creator), Visser, M. E. (Creator) & Megens, H. (Creator), Wageningen University & Research, 11 Aug 2015

  https://www.ncbi.nlm.nih.gov/bioproject/263715

  Dataset

• Whole genome sequencing of Heterandria formosa reveals information about the evolution of the placenta in the livebearing fish family Poeciliidae

  van Kruistum, H. (Creator), van den Heuvel, J. (Creator), Travis, J. (Creator), Kraaijeveld, K. (Creator), Zwaan, B. (Creator), Groenen, M. A. M. (Creator), Megens, H. (Creator) & Pollux, B. (Creator), Wageningen University, 31 Jul 2019

  https://www.ebi.ac.uk/ena/data/view/PRJEB28818

  Dataset

• Quantitative trait loci controlling swimming performance and their effect on growth in Nile tilapia (Oreochromis niloticus)

  Yu, X. (Creator), Mengistu, S. (Creator), Mulder, H. (Creator), Palstra, A. (Creator), Benzie, J. (Creator), Trinh, T. (Creator), Groenen, M. A. M. (Creator), Komen, H. (Creator) & Megens, H. (Creator), Wageningen University & Research, 3 Jan 2022

  DOI: 10.7910/dvn/jhqhs1

  Dataset

• Genomic analysis of saline-tolerant Nile tilapia strain shows signatures of selection and introgression from blue tilapia (Oreochromis aureus)

  Yu, X. (Creator), Setyawan, P. (Creator), Bastiaansen, J. (Creator), Liu, L. (Creator), Imron, I. (Creator), Groenen, M. A. M. (Creator), Komen, H. (Creator) & Megens, H. (Creator), Wageningen University & Research, 3 Jan 2023

  https://www.ebi.ac.uk/ena/browser/view/PRJEB50266

  Dataset

• Parallel genomic changes drive repeated evolution of placentas in live-bearing fish

  van Kruistum, H. (Creator), Nijland, R. (Creator), Groenen, M. A. M. (Creator), Megens, H. (Creator), Pollux, B. (Creator) & Reznick, D. N. (Creator), Wageningen University, 16 Dec 2020

  https://www.ebi.ac.uk/ena/browser/view/PRJEB37697

  Dataset

• Salmo salar MHC class II antigen alpha chain (Sasa-DAA) gene, Sasa-DAA*0304 allele, exon 2 and partial cds

  Consuegra, S. (Creator), Megens, H. (Creator), Leon-Kloosterziel, K. (Creator), Stet, R. J. M. (Creator) & Jordan, W. C. (Creator), Wageningen University & Research, 26 Jul 2016

  https://www.ncbi.nlm.nih.gov/popset/60547514

  Dataset

• Data from: Distribution and functionality of copy number variation across European cattle populations

  Upadhyay, M. R. (Creator), Da Silva, V. (Creator), Megens, H. (Creator), Visker, M. H. P. W. (Creator), Ajmone-Marsan, P. (Creator), Bâlteanu, V. A. (Creator), Dunner, S. (Creator), Garcia, J. F. (Creator), Ginja, C. (Creator), Kantanen, J. (Creator), Groenen, M. A. M. (Creator) & Crooijmans, R. (Creator), Wageningen University & Research, 24 Aug 2017

  DOI: 10.5061/dryad.s57d6

  Dataset

• Population bottlenecks and deleterious variation in small populations

  Bortoluzzi, C. (Creator), Bosse, M. (Creator), Derks, M. (Creator), Crooijmans, R. (Creator), Groenen, M. A. M. (Creator) & Megens, H. (Creator), Wageningen University, 15 Sept 2019

  https://www.ebi.ac.uk/ena/data/view/PRJEB34245

  Dataset

• Data from: Genetic origin, admixture and population history of aurochs (Bos primigenius) and primitive European cattle

  Upadhyay, M. R. (Creator), Chen, W. (Creator), Lenstra, J. A. (Creator), Goderie, C. R. J. (Creator), Machugh, D. E. (Creator), Park, S. D. E. (Creator), Magee, D. A. (Creator), Matassino, D. (Creator), Ciani, F. (Creator), Megens, H. (Creator), van Arendonk, J. A. M. (Creator) & Groenen, M. A. M. (Creator), Wageningen University & Research, 2016

  DOI: 10.5061/dryad.f2d1q

  Dataset