Hauke Smidt

Search results

• Bioactivity screening and gene-trait matching of sponge-associated bacteria

  Gavriilidou, A. (Creator), Mackenzie, T. A. (Creator), Sánchez, P. (Creator), Tormo, J. R. (Creator), Ingham, C. (Creator), Smidt, H. (Creator) & Sipkema, D. (Creator), Wageningen University, 6 Jan 2021

  https://www.ebi.ac.uk/ena/browser/view/PRJEB41620

  Dataset

• Re-stabilisation processes after scraping of full-scale slow sand filters

  Trikannad, S. A. (Creator), Attiani, V. (Creator), van der Wielen, P. W. J. J. (Creator), Smidt, H. (Creator), van der Hoek, J. P. (Creator) & van Halem, D. (Creator), Wageningen University & Research, 1 May 2024

  https://www.ebi.ac.uk/ena/browser/view/PRJEB72542

  Dataset

• NG-Tax, a highly accurate and validated pipeline for analysis of 16S rRNA amplicons from complex biomes

  Ramiro Garcia, J. (Creator), Hermes, G. D. A. (Creator), Giatsis, C. (Creator), Sipkema, D. (Creator), Zoetendal, E. G. (Creator), Schaap, P. J. (Creator) & Smidt, H. (Creator), Wageningen University, 11 Nov 2015

  https://www.ebi.ac.uk/ena/data/view/PRJEB11702

  Dataset

• uncultured bacterium 16S ribosomal RNA gene, partial sequence

  Sousa, D. Z. (Creator), Pereira, M. A. (Creator), Stams, A. J. M. (Creator), Alves, M. M. (Creator) & Smidt, H. (Creator), Wageningen University & Research, 16 Feb 2007

  https://www.ncbi.nlm.nih.gov/popset/93139431

  Dataset

• Unveiling the impact of a STEC specific phage on the colon microbiome, using an in vitro fermentation model.

  Pinto, G. (Creator), Shetty, S. (Creator), Zoetendal, E. (Creator) & Smidt, H. (Creator), Wageningen University and Research Centre, 1 Feb 2022

  https://www.ebi.ac.uk/ena/browser/view/PRJEB49704

  Dataset

• Transcriptome profiling of porcine jejunum tissue, its derived organoids over long-term culture, and transformed cell line IPECJ2 as reference model

  van der Hee, B. (Creator), Crooijmans, R. (Creator), Taverne, N. (Creator), Choudhury, R. (Creator), Loonen-Jaklofsky, L. (Creator), Madsen, O. (Creator), Smidt, H. (Creator) & Wells, J. (Creator), Wageningen University, 13 Mar 2020

  https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE146408

  Dataset

• Benzene reactor liquid, biofilm sampling

  van der Waals, J. M. (Creator), Atashgahi, S. (Creator), da Rocha, U. N. (Creator), van der Zaan, B. M. (Creator), Smidt, H. (Creator) & Gerritse, J. (Creator), Wageningen University, 21 Mar 2017

  https://www.ebi.ac.uk/ena/data/view/PRJEB18709

  Dataset

• environmental samples 16S ribosomal RNA gene, partial sequence

  van der Zaan, B. M. (Creator), Talarico Saia, F. (Creator), Plugge, C. M. (Creator), de Vos, W. M. (Creator), Smidt, H. (Creator), Stams, A. J. M. (Creator), Langenhoff, A. A. M. (Creator) & Gerritse, J. (Creator), Deltares, 25 Apr 2012

  https://www.ncbi.nlm.nih.gov/popset/238559764

  Dataset

• Uncultured bacterium expoxyalkane:coenzyme transferase gene, partial cds

  Atashgahi, S. (Creator), Lu, Y. (Creator), Ramiro Garcia, J. (Creator), Peng, P. (Creator), Maphosa, F. (Creator), Sipkema, D. (Creator), Dejonghe, W. (Creator), Smidt, H. (Creator) & Springael, D. (Creator), Wageningen University & Research, 23 Jan 2017

  https://www.ncbi.nlm.nih.gov/popset/1132402361

  Dataset

• Bacterial composition of Nannochloropsis sp. CCAP211/78 in outdoor reactors Raw sequence reads

  Lian, J. (Creator), Schimmel, P. (Creator), Sanchez-Garcia, S. (Creator), Wijffels, R. H. (Creator), Smidt, H. (Creator) & Sipkema, D. (Creator), Wageningen University & Research, 28 Aug 2018

  https://www.ncbi.nlm.nih.gov/bioproject/488170

  Dataset

• Bioaugmentation_simulated_gw_systems

  Aldas Vargas, A. (Creator), Kers, J. G. (Creator), Smidt, H. (Creator), Rijnaarts, H. (Creator) & Sutton, N. (Creator), Wageningen University and Research Centre, 20 Jan 2023

  https://www.ebi.ac.uk/ena/browser/view/PRJEB42809

  Dataset

• Gut microbial composition of C57BL/6J mice and levels of betaines in related samples

  Koistinen, V. M. (Creator), Kärkkäinen, O. (Creator), Borewicz, K. (Creator), Zarei, I. (Creator), Jokkala, J. (Creator), Micard, V. (Creator), Rosa-Sibakov, N. (Creator), Auriola, S. (Creator), Aura, A. M. (Creator), Smidt, H. (Creator) & Hanhineva, K. (Creator), 3 Jan 2019

  DOI: 10.23728/b2share.648f1de094d84c40a3b17016b8a870c8

  Dataset

• Mining microbial metatranscriptomes for expression of antibiotic resistance genes under natural conditions

  Versluis, D. (Creator), D'Andrea, M. M. (Creator), Ramiro Garcia, J. (Creator), Leimena, M. M. (Creator), Hugenholtz, F. (Creator), Zhang, J. (Creator), Ozturk, B. (Creator), Nylund, L. (Creator), Sipkema, D. (Creator), van Schaik, W. (Creator), de Vos, W. M. (Creator), Kleerebezem, M. (Creator), Smidt, H. (Creator) & van Passel, M. W. J. (Creator), Wageningen University, 29 Jan 2016

  https://www.ebi.ac.uk/ena/data/view/PRJEB7599

  Dataset

• Do apes smell like humans? The role of skin bacteria and volatiles of primates in mosquito host selection

  Verhulst, N. (Creator), Umanetc, A. (Creator), Weldegergis, B. (Creator), Maas, J. P. A. (Creator), Visser, T. (Creator), Dicke, M. (Creator), Smidt, H. (Creator) & Takken, W. (Creator), Wageningen University, 8 Nov 2018

  https://www.ebi.ac.uk/ena/data/view/PRJEB28608

  Dataset

• uncultured bacterium 16S ribosomal RNA gene, partial sequence

  Konstantinov, S. R. (Creator), Awati, A. A. (Creator), Smidt, H. (Creator), Williams, B. A. (Creator), Akkermans, A. D. L. (Creator) & de Vos, W. M. (Creator), Wageningen University & Research, 8 Jul 2004

  https://www.ncbi.nlm.nih.gov/popset/45738997

  Dataset

• Comparative ruminal study of buffalo (Bubalus bubalis) and cattle (Bos taurus), and their response to maize grain grown on mycorrhized soil

  Chiariotti, A. (Creator), Edwards, J. (Creator), Hermes, G. (Creator), Catillo, G. (Creator), Meo Zilio, D. (Creator), Di Giovanni, S. (Creator), Smidt, H. (Creator) & Buttazzoni, L. (Creator), Wageningen University, 12 May 2020

  https://www.ebi.ac.uk/ena/browser/view/PRJEB37928

  Dataset

• Ethyl tert-butyl ether (EtBE) degradation by an algal-bacterial culture

  van der Waals, J. M. (Creator), Plugge, C. M. (Creator), Meima-Franke, M. (Creator), de Waard, P. (Creator), Bodelier, P. L. E. (Creator), Smidt, H. (Creator) & Gerritse, J. (Creator), Wageningen University, 23 Aug 2018

  https://www.ebi.ac.uk/ena/data/view/PRJEB25329

  Dataset

• Arabinoxylan-Oligosaccharide Intake changes the microbiota and softens stool consistency without changes in gut transit and metabolic health in healthy adults

  Müller, M. (Creator), Hermes, G. (Creator), Canfora, E. E. (Creator), Holst, J. J. (Creator), Zoetendal, E. (Creator), Smidt, H. (Creator), Troost, F. (Creator), Schaap, F. G. (Creator), Damink, S. O. (Creator), Jocken, J. W. E. (Creator), Lenaerts, K. (Creator), Masclee, A. A. M. (Creator) & Blaak, E. E. (Creator), Wageningen University & Research, 6 Jun 2019

  https://www.ebi.ac.uk/ena/data/view/PRJEB32919

  Dataset

• uncultured bacterium 16S ribosomal RNA gene, partial sequence

  Booijink, C. C. G. M. (Creator), El-Aidy, S. (Creator), Rajilic-Stojanovic, M. (Creator), Heilig, G. H. J. (Creator), Troost, F. J. (Creator), Smidt, H. (Creator), Kleerebezem, M. (Creator), de Vos, W. M. (Creator) & Zoetendal, E. G. (Creator), Wageningen University & Research, 29 Dec 2010

  https://www.ncbi.nlm.nih.gov/popset/256355253

  Dataset

• Enteric and fecal methane emissions from dairy cows fed grass or corn silage diets supplemented with rapeseed oil

  Ramin, M. (Creator), Chagas, J. C. (Creator), Smidt, H. (Creator), Gomez Exposito, R. (Creator) & Krizsan, S. J. (Creator), Wageningen University, 30 Apr 2021

  https://www.ebi.ac.uk/ena/browser/view/PRJEB43237

  Dataset

• Genome sequence of organohalide-respiring Desulfoluna spongiiphila DBB and Desulfoluna butyratoxydans MSL71T

  Peng, P. (Creator), Goris, T. (Creator), Lu, Y. (Creator), Nijsse, B. (Creator), Burrichter, A. (Creator), Schleheck, D. (Creator), Koehorst, J. (Creator), Liu, J. (Creator), Sipkema, D. (Creator), Sinninghe Damste, J. S. (Creator), Stams, F. (Creator), Häggblom, M. M. (Creator), Smidt, H. (Creator) & Atashgahi, S. (Creator), Wageningen University, 15 May 2019

  https://www.ebi.ac.uk/ena/data/view/PRJEB31368

  Dataset

• uncultured bacterium 16S ribosomal RNA gene, partial sequence

  van Houten, B. H. G. W. (Creator), van Doesburg, W. C. J. (Creator), Dijkman, H. (Creator), Copini, C. F. M. (Creator), Smidt, H. (Creator) & Stams, A. J. M. (Creator), Wageningen University & Research, 9 Sept 2009

  https://www.ncbi.nlm.nih.gov/popset/90896310

  Dataset

• Free Faecal Water in Horses: Analysis of faecal microbiota and the impact of faecal microbial transplantation on symptom severity

  Laustsen, L. (Creator), Edwards, J. (Creator), Hermes, G. (Creator), Lúthersson, N. (Creator), van Doorn, D. A. (Creator), Okrathok, S. (Creator), Kujawa, T. J. (Creator) & Smidt, H. (Creator), Wageningen University, 26 Jun 2020

  https://www.ebi.ac.uk/ena/browser/view/PRJEB35172

  Dataset

• Differences exist in the faecal microbiota of domesticated equines

  Edwards, J. (Creator), Schennink, A. (Creator), Burden, F. (Creator), Long, S. (Creator), van Doorn, D. A. (Creator), Pellikaan, W. (Creator), Dijkstra, J. (Creator), Saccenti, E. (Creator) & Smidt, H. (Creator), Wageningen University, 6 Jan 2020

  https://www.ebi.ac.uk/ena/data/view/PRJEB32772

  Dataset

• small intestine intervention

  An, R. (Creator), Wilms, E. (Creator), Gerritsen, J. (Creator), Kim, H. K. (Creator), Pérez, C. S. (Creator), Besseling-van der Vaart, I. (Creator), Jonkers, D. M. A. E. (Creator), Rijkers, G. T. (Creator), de Vos, W. M. (Creator), Masclee, A. A. M. (Creator), Zoetendal, E. G. (Creator), Troost, F. J. (Creator) & Smidt, H. (Creator), Wageningen University & Research, 1 Apr 2023

  https://www.ebi.ac.uk/ena/browser/view/PRJEB55599

  Dataset