Hauke Smidt

Search results

• Rationally designed and assembled a Diet based Minimal Microbiome (Db-MM) consisting of ten core gut bacteria that convert dietary fiber to short-chain fatty acids

  Shetty, S. (Creator), Kuipers, B. (Creator), Atashgahi, S. (Creator), Aalvink, S. (Creator), Smidt, H. (Creator) & de Vos, W. (Creator), Wageningen University, 12 Apr 2021

  https://www.ebi.ac.uk/ena/browser/view/PRJEB36253?show=reads

  Dataset

• Comparative genomic analysis of Flavobacteriaceae: insights into carbohydrate metabolism, gliding motility and secondary metabolite biosynthesis

  Gavriilidou, A. (Creator), Gutleben, J. (Creator), Versluis, D. (Creator), Forgiarini, F. (Creator), van Passel, M. (Creator), Ingham, C. J. (Creator), Smidt, H. (Creator) & Sipkema, D. (Creator), Wageningen University & Research, 21 Aug 2020

  DOI: 10.6084/m9.figshare.c.5097999

  Dataset

• Genome sequencing of Marine Flavobacteriaceae isolated from sponges

  Gavriilidou, A. (Creator), Gutleben, J. (Creator), Versluis, D. (Creator), Forgiarini, F. (Creator), van Passel, M. (Creator), Ingham, C. J. (Creator), Smidt, H. (Creator) & Sipkema, D. (Creator), Wageningen University, 6 Jan 2020

  https://www.ebi.ac.uk/ena/browser/view/PRJEB35092

  Dataset

• Relative contributions of egg-associated and substrate-associated microorganisms to Black Soldier Fly larval performance and microbiota

  Schreven, S. (Creator), de Vries, H. (Creator), Hermes, G. (Creator), Smidt, H. (Creator), Dicke, M. (Creator) & van Loon, J. (Creator), Wageningen University, 31 Jan 2021

  https://www.ebi.ac.uk/ena/browser/view/PRJEB40821

  Dataset

• Power of the crowd: substrate-dependent impact of black soldier fly larvae on bacterial community composition in substrate and larval gut

  Schreven, S. (Creator), de Vries, H. (Creator), Hermes, G. (Creator), Zeni, G. (Creator), Smidt, H. (Creator), Dicke, M. (Creator) & van Loon, J. (Creator), Wageningen University, 31 Jan 2021

  https://www.ebi.ac.uk/ena/browser/view/PRJEB40667

  Dataset

• Genome sequence of Desulfitobacterium hafniense PCE-S

  Goris, T. (Creator), Hornung, B. V. H. (Creator), Kruse, T. (Creator), Reinhold, A. (Creator), Westermann, M. (Creator), Schaap, P. (Creator), Smidt, H. (Creator) & Diekert, G. (Creator), Wageningen University, 15 Oct 2014

  https://www.ebi.ac.uk/ena/data/view/PRJEB6708

  Dataset

• Methanosarcinaceae 16S ribosomal RNA gene, partial sequence

  de Bok, F. A. M. (Creator), van Leerdam, R. C. (Creator), Lomans, B. (Creator), Smidt, H. (Creator), Lens, P. (Creator), Janssen, A. J. H. (Creator) & Stams, A. J. M. (Creator), Wageningen University & Research, 6 Dec 2006

  https://www.ncbi.nlm.nih.gov/popset/108744057

  Dataset

• Metagenomic survey of chloroform fate in hypersaline lake Strawbridge in western Australia

  Peng, P. (Creator), Lu, Y. (Creator), Bosma, T. (Creator), Nijenhuis, I. (Creator), Nijsse, B. (Creator), Shetty, S. (Creator), Ruecker, A. (Creator), Umanetc, A. (Creator), Ramiro Garcia, J. (Creator), Kappler, A. (Creator), Sipkema, D. (Creator), Smidt, H. (Creator) & Atashgahi, S. (Creator), Wageningen University, 2 Dec 2019

  https://www.ebi.ac.uk/ena/data/view/PRJEB32090

  Dataset

• Tubulinea 18S ribosomal RNA gene, partial sequence

  Kuiper, M. W. (Creator), Valster, R. M. (Creator), Wullings, B. (Creator), Boonstra, H. (Creator), Smidt, H. (Creator) & van der Kooij, D. (Creator), Wageningen University & Research, 7 Sep 2006

  https://www.ncbi.nlm.nih.gov/popset/77701904

  Dataset

• Bacterial fingerprints of marine sponges with different bacterial transmission strategies

  Smidt, H. (Creator) & Sipkema, D. (Creator), Wageningen University, 4 Oct 2012

  https://www.ebi.ac.uk/ena/data/view/PRJEB3302

  Dataset

• GOS elderly

  Wilms, E. (Creator), An, R. (Creator), Smolinska, A. (Creator), Stevens, Y. (Creator), Weseler, A. R. (Creator), Elizalde, M. (Creator), Drittij, M. J. (Creator), Ioannou, N. (Creator), van Schooten, F. J. (Creator), Smidt, H. (Creator), Masclee, A. A. M. (Creator), Zoetendal, E. (Creator) & Jonkers, D. M. A. E. (Creator), Wageningen University, 17 Dec 2020

  https://www.ebi.ac.uk/ena/browser/view/PRJEB32547

  Dataset

• Cultured bacterial diversity of sponges still largely unexplored: a cultivation study of three Mediterranean sponges

  Versluis, D. (Creator), Mcpherson, K. R. (Creator), van Passel, M. W. J. (Creator), Smidt, H. (Creator) & Sipkema, D. (Creator), Wageningen University, 22 Apr 2015

  https://www.ebi.ac.uk/ena/data/view/PRJEB8621

  Dataset

• uncultured bacterium 16S ribosomal RNA gene, partial sequence

  Konstantinov, S. R. (Creator), Awati, A. A. (Creator), Smidt, H. (Creator), Williams, B. A. (Creator), Akkermans, A. D. L. (Creator) & de Vos, W. (Creator), Wageningen University & Research, 8 Jul 2004

  https://www.ncbi.nlm.nih.gov/popset/45738997

  Dataset

• Mixed organisms tryptophan halogenase gene, partial cds

  Öztürk, B. (Creator), de Jaeger, L. (Creator), Smidt, H. (Creator) & Sipkema, D. (Creator), Wageningen University & Research, 24 Oct 2013

  https://www.ncbi.nlm.nih.gov/popset/414448310

  Dataset

• uncultured fungus 18S ribosomal RNA gene, partial sequence

  Naim, M. A. (Creator), Smidt, H. (Creator) & Sipkema, D. (Creator), Wageningen University & Research, 4 Sep 2017

  https://www.ncbi.nlm.nih.gov/popset/1238280632

  Dataset

• Evolution of the microbial communities in a submerged fixed bed bioreactor during biological treatment of saline urban wastewater

  Cortes Lorenzo, C. (Creator), Sipkema, D. (Creator), Rodríguez-Díaz, M. (Creator), Fuentes Enriquez de Salamanca, S. (Creator), Juárez-Jiménez, B. (Creator), Rodelas, B. (Creator), Smidt, H. (Creator) & González-López, J. (Creator), Wageningen University, 21 May 2013

  https://www.ebi.ac.uk/ena/data/view/PRJEB1662

  Dataset

• Cultivation of bacteria from Aplysina aerophoba: effects of oxygen and nutrient gradients

  Gutleben, J. (Creator), Sales E Santos Loureiro, C. (Creator), Ramírez Romero, L. A. (Creator), Shetty, S. (Creator), Wijffels, R. (Creator), Smidt, H. (Creator) & Sipkema, D. (Creator), Wageningen University, 30 Jul 2019

  https://www.ebi.ac.uk/ena/data/view/PRJEB31820

  Dataset

• Pectin intervention

  An, R. (Creator), Wilms, E. (Creator), Smolinska, A. (Creator), Hermes, G. (Creator), Masclee, A. A. M. (Creator), de Vos, P. (Creator), Schols, H. (Creator), Van Schooten, F. J. (Creator), Smidt, H. (Creator), Jonkers, D. M. A. E. (Creator), Zoetendal, E. (Creator) & Troost, F. J. (Creator), Wageningen University, 29 Oct 2020

  https://www.ebi.ac.uk/ena/browser/view/PRJEB31775

  Dataset

• Genome sequence of organohalide-respiring Desulfoluna spongiiphila DBB and Desulfoluna butyratoxydans MSL71T

  Peng, P. (Creator), Goris, T. (Creator), Lu, Y. (Creator), Nijsse, B. (Creator), Burrichter, A. (Creator), Schleheck, D. (Creator), Koehorst, J. (Creator), Liu, J. (Creator), Sipkema, D. (Creator), Sinninghe Damste, J. S. (Creator), Stams, F. (Creator), Häggblom, M. M. (Creator), Smidt, H. (Creator) & Atashgahi, S. (Creator), Wageningen University, 15 May 2019

  https://www.ebi.ac.uk/ena/data/view/PRJEB31368

  Dataset

• uncultured bacterium 16S ribosomal RNA gene, partial sequence

  van Houten, B. H. G. W. (Creator), van Doesburg, W. (Creator), Dijkman, H. (Creator), Copini, C. F. M. (Creator), Smidt, H. (Creator) & Stams, A. J. M. (Creator), Wageningen University & Research, 9 Sep 2009

  https://www.ncbi.nlm.nih.gov/popset/90896310

  Dataset

• Combined dietary supplementation of long chain inulin and Lactobacillus acidophilus W37 supports oral vaccination efficacy against Salmonella Typhimurium in piglets

  Lepine, A. (Creator), Konstanti, P. (Creator), Borewicz, K. (Creator), Resink, J. W. (Creator), de Wit, N. (Creator), de Vos, P. (Creator), Smidt, H. (Creator) & Mes, J. (Creator), Wageningen University, 31 Mar 2019

  https://www.ebi.ac.uk/ena/data/view/PRJEB31925

  Dataset

• Sequencing the bacterial metatranscriptome associated with the marine sponge Crambe crambe

  Versluis, D. (Creator), D'Andrea, M. M. (Creator), Ramiro Garcia, J. (Creator), Leimena, M. M. (Creator), Hugenholtz, F. (Creator), Zhang, J. (Creator), Ozturk, B. (Creator), Nylund, L. (Creator), Sipkema, D. (Creator), van Schaik, W. (Creator), de Vos, W. (Creator), Kleerebezem, M. (Creator), Smidt, H. (Creator) & van Passel, M. W. J. (Creator), Wageningen University, 7 Dec 2015

  https://www.ebi.ac.uk/ena/data/view/PRJEB7474

  Dataset

• Metagenome analysis reveals yet unexplored reductive dechlorinating potential of Dehalobacter sp. E1 growing in coculture with Sedimentibacter sp.

  Maphosa, F. (Creator), van Passel, M. W. J. (Creator), de Vos, W. (Creator) & Smidt, H. (Creator), Wageningen University, 19 Sep 2012

  https://www.ebi.ac.uk/ena/data/view/PRJEB385

  Dataset

• uncultured bacterium 16S ribosomal RNA gene, partial sequence

  Konstantinov, S. R. (Creator), Awati, A. A. (Creator), Williams, B. A. (Creator), Miller, B. G. (Creator), Jones, P. (Creator), Stokes, C. R. (Creator), Akkermans, A. D. L. (Creator), Smidt, H. (Creator) & de Vos, W. (Creator), Wageningen University & Research, 6 Jul 2006

  https://www.ncbi.nlm.nih.gov/popset/74476281

  Dataset

• environmental samples 16S ribosomal RNA gene, partial sequence

  van der Zaan, B. M. (Creator), Talarico Saia, F. (Creator), Plugge, C. (Creator), de Vos, W. (Creator), Smidt, H. (Creator), Stams, A. J. M. (Creator), Langenhoff, A. (Creator) & Gerritse, J. (Creator), Deltares, 25 Apr 2012

  https://www.ncbi.nlm.nih.gov/popset/238559764

  Dataset