Hauke Smidt

Search results

• A benzene-degrading nitrate-reducing microbial consortium displays aerobic and anaerobic benzene degradation pathways

  Atashgahi, S. (Creator), Hornung, B. V. H. (Creator), van der Waals, J. M. (Creator), da Rocha, U. N. (Creator), Hugenholtz, F. (Creator), Nijsse, B. (Creator), Molenaar, D. (Creator), van Spanning, R. (Creator), Stams, A. J. M. (Creator), Gerritse, J. (Creator) & Smidt, H. (Creator), Wageningen University, 1 Mar 2018

  https://www.ebi.ac.uk/ena/data/view/PRJEB20461

  Dataset

• human gut metagenome Transcriptome or Gene expression

  Leimena, M. M. (Creator), Ramiro-Garcia, J. (Creator), Davids, M. (Creator), van den Bogert, B. (Creator), Smidt, H. (Creator), Smid, E. J. (Creator), te Boekhorst, J. (Creator), Zoetendal, E. G. (Creator), Schaap, P. J. (Creator) & Kleerebezem, M. (Creator), Wageningen University & Research, 3 Apr 2013

  https://www.ncbi.nlm.nih.gov/bioproject/196118

  Dataset

• cellular organisms 16S ribosomal RNA gene, partial sequence

  van Houten, B. H. G. W. (Creator), Roest, C. (Creator), Tzeneva, V. A. (Creator), Dijkman, H. (Creator), Smidt, H. (Creator) & Stams, A. J. M. (Creator), Wageningen University & Research, 27 Aug 2009

  https://www.ncbi.nlm.nih.gov/popset/56417348

  Dataset

• Organohalide respiration in a pristine hypersaline lake

  Peng, P. (Creator), Lu, Y. (Creator), Nijenhuis, I. (Creator), Nijsse, B. (Creator), Shetty, S. (Creator), Ruecker, A. (Creator), Umanetc, A. (Creator), Ramiro Garcia, J. (Creator), Kappler, A. (Creator), Sipkema, D. (Creator), Smidt, H. (Creator) & Atashgahi, S. (Creator), Wageningen University & Research, 30 Mar 2017

  https://www.ebi.ac.uk/ena/data/view/PRJEB14107

  Dataset

• uncultured bacterium 16S ribosomal RNA gene, partial sequence

  Sutton, N. B. (Creator), Langenhoff, A. A. M. (Creator), Hidalgo Lasso, D. (Creator), van der Zaan, B. M. (Creator), van Gaans, P. (Creator), Maphosa, F. (Creator), Smidt, H. (Creator), Grotenhuis, J. T. C. (Creator) & Rijnaarts, H. H. M. (Creator), Wageningen University & Research, 27 Feb 2014

  https://www.ncbi.nlm.nih.gov/popset/526131411

  Dataset

• The effect of DNA extraction methods on observed microbial communities from fibrous and liquid rumen fractions of dairy cows

  Vaidya, J. D. (Creator), van den Bogert, B. (Creator), Edwards, J. E. (Creator), Boekhorst, J. (Creator), van Gastelen, S. (Creator), Saccenti, E. (Creator), Plugge, C. M. (Creator) & Smidt, H. (Creator), Wageningen University, 17 Oct 2017

  https://www.ebi.ac.uk/ena/data/view/PRJEB22996

  Dataset

• Metagenomic insights into the microbial networks of a 7,12-benz(a)anthraquinone degrading community from a PAH-contaminated soil

  Jiménez-Volkerink, S. N. (Creator), Jordán, M. (Creator), Smidt, H. (Creator), Minguillón, C. (Creator), Vila, J. (Creator) & Grifoll, M. (Creator), 17 Nov 2023

  https://www.ncbi.nlm.nih.gov/bioproject/932299

  Dataset

• Genome sequence of the rat gut bacterium Romboutsia ilealis CRIB

  Gerritsen, J. (Creator), Timmerman, H. M. (Creator), Fuentes, S. (Creator), van Minnen, L. P. (Creator), Panneman, H. (Creator), Konstantinov, S. R. (Creator), Rombouts, F. M. (Creator), Gooszen, H. G. (Creator), Akkermans, L. M. A. (Creator), Smidt, H. (Creator) & Rijkers, G. T. (Creator), Wageningen University, 31 Mar 2017

  https://www.ebi.ac.uk/ena/data/view/PRJEB4727

  Dataset

• Pectin intervention

  An, R. (Creator), Wilms, E. (Creator), Smolinska, A. (Creator), Hermes, G. (Creator), Masclee, A. A. M. (Creator), de Vos, P. (Creator), Schols, H. (Creator), Van Schooten, F. J. (Creator), Smidt, H. (Creator), Jonkers, D. M. A. E. (Creator), Zoetendal, E. (Creator) & Troost, F. J. (Creator), Wageningen University, 29 Oct 2020

  https://www.ebi.ac.uk/ena/browser/view/PRJEB31775

  Dataset

• Proteobacteria expoxyalkane:coenzyme transferase gene, partial cds

  Atashgahi, S. (Creator), Lu, Y. (Creator), Ramiro-Garcia, J. (Creator), Peng, P. (Creator), Maphosa, F. (Creator), Sipkema, D. (Creator), Dejonghe, W. (Creator), Smidt, H. (Creator) & Springael, D. (Creator), Wageningen University & Research, 23 Jan 2017

  https://www.ncbi.nlm.nih.gov/popset/1132402401

  Dataset

• Data from: Substrate-dependent impact of black soldier fly larvae on bacterial community composition in substrate and larval body

  Schreven, S. (Creator), de Vries, H. (Creator), Hermes, G. (Creator), Zeni, G. (Creator), Smidt, H. (Creator), Dicke, M. (Creator) & van Loon, J. (Creator), Wageningen University & Research, 28 Apr 2022

  DOI: 10.4121/13118291

  Dataset

• Evolution of the microbial communities in a submerged fixed bed bioreactor during biological treatment of saline urban wastewater

  Cortes Lorenzo, C. (Creator), Sipkema, D. (Creator), Rodríguez-Díaz, M. (Creator), Fuentes Enriquez de Salamanca, S. (Creator), Juárez-Jiménez, B. (Creator), Rodelas, B. (Creator), Smidt, H. (Creator) & González-López, J. (Creator), Wageningen University, 21 May 2013

  https://www.ebi.ac.uk/ena/data/view/PRJEB1662

  Dataset

• Microbiota-dependent influence of prebiotics on the resilience of infant gut microbiota

  Endika, M. F. (Creator), Barnett, D. J. M. (Creator), Klostermann, C. E. (Creator), Schols, H. A. (Creator), Arts, I. C. W. (Creator), Penders, J. (Creator), Nauta, A. (Creator), Smidt, H. (Creator) & Venema, K. (Creator), Wageningen University & Research, 14 Jan 2023

  https://www.ebi.ac.uk/ena/browser/view/PRJEB58807

  Dataset

• Rationally designed and assembled a Diet based Minimal Microbiome (Db-MM) consisting of ten core gut bacteria that convert dietary fiber to short-chain fatty acids

  Shetty, S. (Creator), Kuipers, B. (Creator), Atashgahi, S. (Creator), Aalvink, S. (Creator), Smidt, H. (Creator) & de Vos, W. (Creator), Wageningen University, 12 Apr 2021

  https://www.ebi.ac.uk/ena/browser/view/PRJEB36253?show=reads

  Dataset

• Comparative genomics, symbiotic capacities and high metabolic flexibility of the marine genus Pseudovibrio

  Versluis, D. (Creator), Nijsse, B. (Creator), Mohamad, M. A. N. (Creator), Koehorst, J. J. (Creator), Wiese, J. (Creator), Imhoff, J. F. (Creator), Schaap, P. J. (Creator), van Passel, M. W. J. (Creator), Smidt, H. (Creator) & Sipkema, D. (Creator), Wageningen University, 28 Jun 2017

  https://www.ebi.ac.uk/ena/data/view/PRJEB20602

  Dataset

• GOS elderly

  Wilms, E. (Creator), An, R. (Creator), Smolinska, A. (Creator), Stevens, Y. (Creator), Weseler, A. R. (Creator), Elizalde, M. (Creator), Drittij, M. J. (Creator), Ioannou, N. (Creator), van Schooten, F. J. (Creator), Smidt, H. (Creator), Masclee, A. A. M. (Creator), Zoetendal, E. (Creator) & Jonkers, D. M. A. E. (Creator), Wageningen University, 17 Dec 2020

  https://www.ebi.ac.uk/ena/browser/view/PRJEB32547

  Dataset

• Unravelling the contribution of nitrifying and methanotrophic bacteria to micropollutant co-metabolism in rapid sand filters

  Wang, J. (Creator), Zhang, C. (Creator), Poursat, B. (Creator), de Ridder, D. (Creator), Smidt, H. (Creator), van der Wal, B. (Creator) & Sutton, N. (Creator), Wageningen University, 5 Jan 2022

  https://www.ebi.ac.uk/ena/browser/view/PRJEB48767

  Dataset

• Non-invasive continuous real-time in vivo analysis of microbial hydrogen production shows adaptation to fermentable carbohydrates in mice

  Fernández Calleja, J. M. S. (Creator), Konstanti, P. (Creator), Swarts, J. J. M. (Creator), Bouwman, L. M. S. (Creator), Garcia-Campayo, V. (Creator), Billecke, N. (Creator), Oosting, A. (Creator), Smidt, H. (Creator), Keijer, J. (Creator) & van Schothorst, E. M. (Creator), Wageningen University, 5 Mar 2018

  https://www.ebi.ac.uk/ena/data/view/PRJEB23475

  Dataset

• Comparative genomic analysis of Flavobacteriaceae: insights into carbohydrate metabolism, gliding motility and secondary metabolite biosynthesis

  Gavriilidou, A. (Creator), Gutleben, J. (Creator), Versluis, D. (Creator), Forgiarini, F. (Creator), van Passel, M. (Creator), Ingham, C. J. (Creator), Smidt, H. (Creator) & Sipkema, D. (Creator), Wageningen University & Research, 21 Aug 2020

  DOI: 10.6084/m9.figshare.c.5097999

  Dataset

• Toll-Like Receptor-dependent immunomodulatory activity of Pycnogenol

  Verlaet, A. A. J. (Creator), van der Bolt, N. (Creator), Meijer, B. (Creator), Breynaert, A. (Creator), Naessens, T. (Creator), Konstanti, P. (Creator), Smidt, H. (Creator), Hermans, N. (Creator), Savelkoul, H. (Creator) & Teodorowicz, G. (Creator), Wageningen University, 6 Jan 2019

  https://www.ebi.ac.uk/ena/data/view/PRJEB29793

  Dataset

• KOALA infant faeces 16S

  Barnett, D. J. M. (Creator), Endika, M. F. (Creator), Klostermann, C. E. (Creator), Gu, F. (Creator), Thijs, C. (Creator), Nauta, A. (Creator), Schols, H. A. (Creator), Smidt, H. (Creator), Arts, I. C. W. (Creator) & Penders, J. (Creator), 9 Dec 2022

  https://www.ebi.ac.uk/ena/browser/view/PRJEB52836

  Dataset

• Optimizing bioreactor 1

  Atasoy, M. (Creator), Scott, W. T. (Creator), van Gijn, K. (Creator), Koehorst, J. J. (Creator), Smidt, H. (Creator) & Langenhoff, A. A. M. (Creator), Wageningen University & Research, 27 Sept 2022

  https://www.ebi.ac.uk/ena/browser/view/PRJEB54921

  Dataset

• environmental samples 16S ribosomal RNA gene, partial sequence

  van der Zaan, B. M. (Creator), Talarico Saia, F. (Creator), Plugge, C. M. (Creator), de Vos, W. M. (Creator), Smidt, H. (Creator), Stams, A. J. M. (Creator), Langenhoff, A. A. M. (Creator) & Gerritse, J. (Creator), Deltares, 25 Apr 2012

  https://www.ncbi.nlm.nih.gov/popset/359828499

  Dataset

• CRIB

  An, R. (Creator), Wilms, E. (Creator), Gerritsen, J. (Creator), Kim, H. K. (Creator), Pérez, C. S. (Creator), Besseling-van der Vaart, I. (Creator), Jonkers, D. M. A. E. (Creator), Rijkers, G. T. (Creator), de Vos, W. M. (Creator), Masclee, A. A. M. (Creator), Zoetendal, E. G. (Creator), Troost, F. J. (Creator) & Smidt, H. (Creator), Wageningen University & Research, 30 Aug 2021

  https://www.ebi.ac.uk/ena/browser/view/PRJEB42262

  Dataset

• uncultured bacterium 16S ribosomal RNA gene, partial sequence

  Kovatcheva-Datchary, P. P. (Creator), Egert, M. G. G. (Creator), Maathuis, A. (Creator), Rajilic-Stojanovic, M. (Creator), de Graaf, A. A. (Creator), Smidt, H. (Creator), de Vos, W. M. (Creator) & Venema, K. (Creator), Wageningen University & Research, 9 Apr 2009

  https://www.ncbi.nlm.nih.gov/popset/164652767

  Dataset