Hauke Smidt

Search results

• NG-Tax, a highly accurate and validated pipeline for analysis of 16S rRNA amplicons from complex biomes

  Ramiro Garcia, J. (Creator), Hermes, G. D. A. (Creator), Giatsis, C. (Creator), Sipkema, D. (Creator), Zoetendal, E. (Creator), Schaap, P. (Creator) & Smidt, H. (Creator), Wageningen University, 11 Nov 2015

  https://www.ebi.ac.uk/ena/data/view/PRJEB11702

  Dataset

• Free Faecal Water: Analysis of horse faecal microbiota and the impact of faecal microbial transplantation on symptom severity

  Laustsen, L. (Creator), Edwards, J. (Creator), Hermes, G. (Creator), Lúthersson, N. (Creator), van Doorn, D. A. (Creator), Okrathok, S. (Creator), Kujawa, T. J. (Creator) & Smidt, H. (Creator), Wageningen University, 9 Jul 2021

  https://www.ebi.ac.uk/ena/browser/view/PRJEB45364

  Dataset

• Aged gut microbiota contributes to systemical inflammaging after transfer to germ-free mice

  Fransen, F. (Creator), van Beek, A. A. (Creator), Borghuis, T. (Creator), El Aidy, S. (Creator), Hugenholtz, F. (Creator), van der Gaast-de Jongh, C. (Creator), Savelkoul, H. (Creator), De Jonge, M. I. (Creator), Boekschoten, M. (Creator), Smidt, H. (Creator), Faas, M. M. (Creator) & de Vos, P. (Creator), Wageningen University, 14 Feb 2018

  https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE104063

  Dataset

• Organohalide respiration in a pristine hypersaline lake

  Peng, P. (Creator), Lu, Y. (Creator), Nijenhuis, I. (Creator), Nijsse, B. (Creator), Shetty, S. (Creator), Ruecker, A. (Creator), Umanetc, A. (Creator), Ramiro Garcia, J. (Creator), Kappler, A. (Creator), Sipkema, D. (Creator), Smidt, H. (Creator) & Atashgahi, S. (Creator), Wageningen University & Research, 30 Mar 2017

  https://www.ebi.ac.uk/ena/data/view/PRJEB14107

  Dataset

• Do apes smell like humans? The role of skin bacteria and volatiles of primates in mosquito host selection

  Verhulst, N. (Creator), Umanetc, A. (Creator), Weldegergis, B. (Creator), Maas, J. P. A. (Creator), Visser, T. (Creator), Dicke, M. (Creator), Smidt, H. (Creator) & Takken, W. (Creator), Wageningen University, 8 Nov 2018

  https://www.ebi.ac.uk/ena/data/view/PRJEB28608

  Dataset

• β2→1-fructans modulate the immune system in vivo in a microbiota-dependent and -independent fashion

  Fransen, F. (Creator), Sahasrabudhe, N. M. (Creator), Elderman, M. (Creator), Bosveld, M. (Creator), El Aidy, S. (Creator), Hugenholtz, F. (Creator), Borghuis, T. (Creator), Kousemaker, B. (Creator), Winkel, S. (Creator), van der Gaast-de Jongh, C. (Creator), de Jonge, M. I. (Creator), Boekschoten, M. (Creator), Smidt, H. (Creator) & de Vos, P. (Creator), Wageningen University, 22 Mar 2018

  https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE94516

  Dataset

• Ethyl tert-butyl ether (EtBE) degradation by an algal-bacterial culture

  van der Waals, J. M. (Creator), Plugge, C. (Creator), Meima-Franke, M. (Creator), de Waard, P. (Creator), Bodelier, P. L. E. (Creator), Smidt, H. (Creator) & Gerritse, J. (Creator), Wageningen University, 23 Aug 2018

  https://www.ebi.ac.uk/ena/data/view/PRJEB25329

  Dataset

• Comparative ruminal study of buffalo (Bubalus bubalis) and cattle (Bos taurus), and their response to maize grain grown on mycorrhized soil

  Chiariotti, A. (Creator), Edwards, J. (Creator), Hermes, G. (Creator), Catillo, G. (Creator), Meo Zilio, D. (Creator), Di Giovanni, S. (Creator), Smidt, H. (Creator) & Buttazzoni, L. (Creator), Wageningen University, 12 May 2020

  https://www.ebi.ac.uk/ena/browser/view/PRJEB37928

  Dataset

• Free Faecal Water in Horses: Analysis of faecal microbiota and the impact of faecal microbial transplantation on symptom severity

  Laustsen, L. (Creator), Edwards, J. (Creator), Hermes, G. (Creator), Lúthersson, N. (Creator), van Doorn, D. A. (Creator), Okrathok, S. (Creator), Kujawa, T. J. (Creator) & Smidt, H. (Creator), Wageningen University, 26 Jun 2020

  https://www.ebi.ac.uk/ena/browser/view/PRJEB35172

  Dataset

• Microbiota composition and metabolomic profiles of the deep sea sponges Weberella bursa, Stryphnus fortis and Geodia barretti along a depth gradient

  Steffen, K. (Creator), Indraningrat, A. (Creator), Erngren, I. (Creator), Haglöf, J. (Creator), Becking, L. (Creator), Smidt, H. (Creator), Yashayaev, I. (Creator), Kenchington, E. (Creator), Pettersson, C. (Creator), Cárdenas, P. (Creator) & Sipkema, D. (Creator), Wageningen University, 25 Apr 2018

  https://www.ncbi.nlm.nih.gov/bioproject/PRJNA453542

  Dataset

• Impact of a wastewater treatment plant on microbial community composition and function in a hyporheic zone of a eutrophic river

  Atashgahi, S. (Creator), Aydin, R. (Creator), Rocha Dimitrov, M. (Creator), Sipkema, D. (Creator), Hamonts, K. (Creator), Lahti, L. (Creator), Maphosa, F. (Creator), Kruse, T. (Creator), Saccenti, E. (Creator), Springael, D. (Creator), Dejonghe, W. (Creator) & Smidt, H. (Creator), Wageningen University, 29 Oct 2015

  https://www.ebi.ac.uk/ena/data/view/PRJEB8703

  Dataset

• Molecular analysis of sponge-associated fungi

  Mohamad, M. A. N. (Creator), Smidt, H. (Creator) & Sipkema, D. (Creator), Wageningen University, 31 Mar 2013

  https://www.ebi.ac.uk/ena/data/view/PRJEB1704

  Dataset

• Mining microbial metatranscriptomes for expression of antibiotic resistance genes under natural conditions

  Versluis, D. (Creator), D'Andrea, M. M. (Creator), Ramiro Garcia, J. (Creator), Leimena, M. M. (Creator), Hugenholtz, F. (Creator), Zhang, J. (Creator), Ozturk, B. (Creator), Nylund, L. (Creator), Sipkema, D. (Creator), van Schaik, W. (Creator), de Vos, W. (Creator), Kleerebezem, M. (Creator), Smidt, H. (Creator) & van Passel, M. W. J. (Creator), Wageningen University, 29 Jan 2016

  https://www.ebi.ac.uk/ena/data/view/PRJEB7599

  Dataset

• Genome sequence of the rat gut bacterium Romboutsia ilealis CRIB

  Gerritsen, J. (Creator), Timmerman, H. M. (Creator), Fuentes, S. (Creator), van Minnen, L. P. (Creator), Panneman, H. (Creator), Konstantinov, S. R. (Creator), Rombouts, F. M. (Creator), Gooszen, H. G. (Creator), Akkermans, L. M. A. (Creator), Smidt, H. (Creator) & Rijkers, G. T. (Creator), Wageningen University, 31 Mar 2017

  https://www.ebi.ac.uk/ena/data/view/PRJEB4727

  Dataset

• Genome sequence of Romboutsia lituseburensis

  Gerritsen, J. (Creator), Umanetc, A. (Creator), van Leeuwen-Staneva, I. N. (Creator), Hornung, B. V. H. (Creator), Ritari, J. (Creator), Paulin, L. (Creator), Rijkers, G. T. (Creator), de Vos, W. (Creator) & Smidt, H. (Creator), Wageningen University, 4 Aug 2018

  https://www.ebi.ac.uk/ena/data/view/PRJEB7306

  Dataset

• Enteric and fecal methane emissions from dairy cows fed grass or corn silage diets supplemented with rapeseed oil

  Ramin, M. (Creator), Chagas, J. C. (Creator), Smidt, H. (Creator), Gomez Exposito, R. (Creator) & Krizsan, S. J. (Creator), Wageningen University, 30 Apr 2021

  https://www.ebi.ac.uk/ena/browser/view/PRJEB43237

  Dataset

• Proteobacteria expoxyalkane:coenzyme transferase gene, partial cds

  Atashgahi, S. (Creator), Lu, Y. (Creator), Ramiro-Garcia, J. (Creator), Peng, P. (Creator), Maphosa, F. (Creator), Sipkema, D. (Creator), Dejonghe, W. (Creator), Smidt, H. (Creator) & Springael, D. (Creator), Wageningen University & Research, 23 Jan 2017

  https://www.ncbi.nlm.nih.gov/popset/1132402401

  Dataset

• Comparative genomics, symbiotic capacities and high metabolic flexibility of the marine genus Pseudovibrio

  Versluis, D. (Creator), Nijsse, B. (Creator), Mohamad, M. A. N. (Creator), Koehorst, J. (Creator), Wiese, J. (Creator), Imhoff, J. F. (Creator), Schaap, P. (Creator), van Passel, M. W. J. (Creator), Smidt, H. (Creator) & Sipkema, D. (Creator), Wageningen University, 28 Jun 2017

  https://www.ebi.ac.uk/ena/data/view/PRJEB20602

  Dataset

• Unravelling the contribution of nitrifying and methanotrophic bacteria to micropollutant co-metabolism in rapid sand filters

  Wang, J. (Creator), Zhang, C. (Creator), Poursat, B. (Creator), de Ridder, D. (Creator), Smidt, H. (Creator), van der Wal, B. (Creator) & Sutton, N. (Creator), Wageningen University, 5 Jan 2022

  https://www.ebi.ac.uk/ena/browser/view/PRJEB48767

  Dataset

• Terrabacteria group 16S ribosomal RNA gene, partial sequence

  Tzeneva, V. A. (Creator), Li, Y. (Creator), Felske, A. (Creator), de Vos, W. (Creator), Akkermans, A. D. L. (Creator), Vaughan, E. E. (Creator) & Smidt, H. (Creator), Wageningen University & Research, 22 Jul 2008

  https://www.ncbi.nlm.nih.gov/popset/33668796

  Dataset

• environmental samples 16S ribosomal RNA gene, partial sequence

  van der Zaan, B. M. (Creator), Talarico Saia, F. (Creator), Plugge, C. (Creator), de Vos, W. (Creator), Smidt, H. (Creator), Stams, A. J. M. (Creator), Langenhoff, A. (Creator) & Gerritse, J. (Creator), Deltares, 25 Apr 2012

  https://www.ncbi.nlm.nih.gov/popset/359828365

  Dataset

• environmental samples 16S ribosomal RNA gene, partial sequence

  van der Zaan, B. M. (Creator), Talarico Saia, F. (Creator), Plugge, C. (Creator), de Vos, W. (Creator), Smidt, H. (Creator), Stams, A. J. M. (Creator), Langenhoff, A. (Creator) & Gerritse, J. (Creator), Deltares, 25 Apr 2012

  https://www.ncbi.nlm.nih.gov/popset/359828499

  Dataset

• The colonization dynamics of the gut microbiota in tilapia larvae

  Giatsis, C. (Creator), Sipkema, D. (Creator), Smidt, H. (Creator), Verreth, J. (Creator) & Verdegem, M. (Creator), Wageningen University, 31 Aug 2013

  https://www.ebi.ac.uk/ena/data/view/PRJEB4462

  Dataset

• Effects of Gut Microbiota Manipulation by Antibiotics on Host Metabolism in Obese Humans: a Randomized Double-blind Placebo-controlled Trial

  Reijnders, D. (Creator), Goossens, G. H. (Creator), Neis, E. P. J. G. (Creator), van der Beek, C. M. (Creator), Most, J. (Creator), Holst, J. J. (Creator), Lenaerts, K. (Creator), Kootte, R. S. (Creator), Nieuwdorp, M. (Creator), Groen, A. K. (Creator), Boekschoten, M. (Creator), Hermes, G. (Creator), Smidt, H. (Creator), Zoetendal, E. (Creator), Dejong, C. H. C. (Creator) & Blaak, E. E. (Creator), Wageningen University, 15 Jul 2016

  https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE76003

  Dataset

• The effect of linseed oil and DGAT1 K232A polymorphism on methane emission, energy and N metabolism, lactation performance ruminal fermentation, and rumen microbial composition of lactating Holstein-Friesian cows

  van Gastelen, S. (Creator), Visker, M. H. P. W. (Creator), Edwards, J. E. (Creator), Antunes Fernandes, E. C. (Creator), Hettinga, K. (Creator), Alferink, S. (Creator), Hendriks, W. (Creator), Bovenhuis, H. (Creator), Smidt, H. (Creator) & Dijkstra, J. (Creator), Wageningen University, 8 Jan 2018

  https://www.ebi.ac.uk/ena/data/view/PRJEB17884

  Dataset