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Research Output 2006 2019

2019

A blueprint of seed desiccation sensitivity in the genome of Castanospermum australe

Correia Silva Santana Marques, A., Dias Costa, M. C., Chathuri, U., Jonkheer, E., Zhao, T., Schijlen, E. G. W. M., Derks, M. F. L., Nijveen, H., Marcet-Houben, M., Julca, I., Delahaie, J., Schranz, E., Gabaldon, T., Pelletier, S., Leprince, O., Ligterink, W., Buitink, J., Hilhorst, H. W. M. & Farrant, J. M., 10 Jun 2019.

Research output: Working paperAcademic

Open Access
Castanospermum australe
desiccation (plant physiology)
genome
seeds
legumes
Open Access
Spodoptera
Lepidoptera
Beta vulgaris
Herbivory
Larva
1 Citation (Scopus)

Association between vitamin content, plant morphology and geographical origin in a worldwide collection of the orphan crop Gynandropsis gynandra (Cleomaceae)

Sogbohossou, E. O. D., Kortekaas, D., Achigan-Dako, E. G., Maundu, P., Stoilova, T., Van Deynze, A., de Vos, C. H. & Schranz, M. E., Sep 2019, In : Planta. 250, 3, p. 933-947 15 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Cleomaceae
Gynandropsis gynandra
vitamin content
Tocopherols
plant morphology
3 Citations (Scopus)

Comparative analysis of repetitive sequences among species from the potato and the tomato clades

Gaiero Guadagna, P., Vaio, M., Peters, S. A., Schranz, M. E., de Jong, J. H. S. G. M. & Speranza, P. R., 15 Feb 2019, In : Annals of Botany. 123, 3, p. 521-532

Research output: Contribution to journalArticleAcademicpeer-review

repetitive sequences
tomatoes
potatoes
genome
Solanum etuberosum
6 Citations (Scopus)

Dissecting the genomic diversification of Late Embryogenesis Abundant (LEA) protein gene families in plants

Silva Artur, M. A., Zhao, T., Ligterink, W., Schranz, E. & Hilhorst, H. W. M., 1 Feb 2019, In : Genome Biology. 11, 2, p. 459-471

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Embryonic Development
genomics
embryogenesis
protein
gene

Drivers of metabolic diversification: how dynamic genomic neighbourhoods generate new biosynthetic pathways in the Brassicaceae

Liu, Z., Suarez Duran, H., Harnvanichvech, Y., Stephenson, M. J., Schranz, M. E., Nelson, D., Medema, M. H. & Osbourn, A., 26 Nov 2019, In : New Phytologist.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Genome Improvement and Genetic Map Construction for Aethionema arabicum, the First Divergent Branch in the Brassicaceae Family.

Nguyen, T. P., Mülich, C., Mohammadin, S., van den Bergh, E., Platts, A. E., Haas, F. B., Rensing, S. A. & Schranz, M. E., 1 Nov 2019, In : Genes, Genomes and Genomics. 9, 11, p. 3521-3530

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Brassicaceae
genome
genome assembly
cole crops
Cyprus

Identifying and Engineering Genes for Parthenogenesis in Plants

Vijverberg, C. A., Ozias-Akins, P. & Schranz, M. E., 19 Feb 2019, In : Frontiers in Plant Science. 10, 128.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
parthenogenesis
engineering
seed productivity
embryogenesis
ova
4 Citations (Scopus)
Open Access
Angiospermae
genomics
genome
genes
transposition (genetics)
1 Citation (Scopus)

Origins and geographic diversification of African rice (Oryza glaberrima)

Veltman, M. A., Flowers, J. M., van Andel, T. R. & Eric Schranz, M., 1 Mar 2019, In : PLoS ONE. 14, 3, e0203508.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Oryza glaberrima
domestication
Genes
Coastal zones
rice

Photosynthesis 2.0

Aarts, M. G. M., van Amerongen, H., Bock, R., Carmo-Silva, E., Croce, R., Finazzi, G., Foyer, C., Genty, B., Harbinson, J., Hibberd, J., Klein Lankhorst, R. M., Schranz, M. E., Struik, P. C. & Weijers, D., 2019, 5 p. Wageningen University and Research.

Research output: Other contributionPamphlet

Open Access
1 Citation (Scopus)

Plastome based phylogenetics and younger crown node age in Pelargonium

van de Kerke, S. J., Shrestha, B., Ruhlman, T. A., Weng, M. L., Jansen, R. K., Jones, C. S., Schlichting, C. D., Hosseini, S., Mohammadin, S., Schranz, M. E. & Bakker, F. T., 1 Aug 2019, In : Molecular Phylogenetics and Evolution. 137, p. 33-43 11 p.

Research output: Contribution to journalArticleAcademicpeer-review

Pelargonium
Crowns
Cape Floristic Region
fynbos
phylogenetics
2 Citations (Scopus)

Recently duplicated sesterterpene (C25) gene clusters in Arabidopsis thaliana modulate root microbiota

Chen, Q., Jiang, T., Liu, Y-X., Liu, H., Zhao, T., Liu, Z., Gan, X., Hallab, A., Wang, X., He, J., Ma, Y., Zhang, F., Jin, T., Schranz, M. E., Wang, Y., Bai, Y. & Wang, G., Jul 2019, In : Science in China Series C-Life Sciences. 62, 7, p. 947-958

Research output: Contribution to journalArticleAcademicpeer-review

Sesterterpenes
Microbiota
Multigene Family
Metabolites
multigene family
1 Citation (Scopus)

The alternative reality of plant mitochondrial DNA: One ring does not rule them all

Kozik, A., Rowan, B. A., Lavelle, D., Berke, L., Schranz, E. M., Michelmore, R. W. & Christensen, A. C., 30 Aug 2019, In : Plos Genetics. 15, 8, p. e1008373

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Plant DNA
Mitochondrial Genome
Mitochondrial DNA
mitochondrial DNA
genome
2 Citations (Scopus)

Usability of reference-free transcriptome assemblies for detection of differential expression: A case study on Aethionema arabicum dimorphic seeds

Wilhelmsson, P. K. I., Chandler, J. O., Fernandez-Pozo, N., Graeber, K., Ullrich, K. K., Arshad, W., Khan, S., Hofberger, J. A., Buchta, K., Edger, P. P., Pires, J. C., Schranz, M. E., Leubner-Metzger, G. & Rensing, S. A., 30 Jan 2019, In : BMC Genomics. 20, 1, 95.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Transcriptome
Seeds
Gene Ontology
Genes
Genome
2018

Andromonoecy in Gynandropsis gynandra (L.) Briq. (Cleomaceae) and effects on fruit and seed production

Zohoungbogbo, H. P. F., Houdegbe, C. A., Sogbohossou, D. E. O., Tossou, M. G., Maundu, P., Schranz, E. M., Van Deynze, A., Zoundjihekpon, J. & Achigan-Dako, E. G., Dec 2018, In : Genetic Resources and Crop Evolution. 65, 8, p. 2231–2239

Research output: Contribution to journalArticleAcademicpeer-review

Cleomaceae
Gynandropsis gynandra
Pollination
fruit production
seed crop production
12 Citations (Scopus)

A roadmap for breeding orphan leafy vegetable species: A case study of Gynandropsis gynandra (Cleomaceae)

Sogbohossou, E. O. D., Achigan-Dako, E. G., Maundu, P., Solberg, S., Deguenon, E. M. S., Mumm, R. H., Hale, I., van Deynze, A. & Schranz, M. E., 10 Jan 2018, In : Horticulture Research. 5, 1, 2.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Cleomaceae
Gynandropsis gynandra
green leafy vegetables
Vegetables
Crops
12 Citations (Scopus)

Brassicales phylogeny inferred from 72 plastid genes: A reanalysis of the phylogenetic localization of two paleopolyploid events and origin of novel chemical defenses

Edger, P. P., Hall, J. C., Harkess, A., Tang, M., Coombs, J., Mohammadin, S., Schranz, E., Xiong, Z., Leebens-Mack, J., Meyers, B. C., Sytsma, K. J., Koch, M. A., Al-Shehbaz, I. A. & Pires, J. C., Mar 2018, In : American Journal of Botany. 105, 3, p. 463-469

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Brassicales
Plastid Genomes
Plastids
chemical defense
plastid
1 Citation (Scopus)

Cloning and Functional Analysis of three Cold Regulated CBF Genes in the Overwintering Crucifer Boechera stricta

Heo, J., van Tienderen, P. & Schranz, M. E., 2018, In : International Journal of Agriculture & Biology. 20, 3, p. 594-600

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Boechera stricta
overwintering
Organism Cloning
molecular cloning
Genes
38 Citations (Scopus)

Comparative genomics of the nonlegume Parasponia reveals insights into evolution of nitrogen-fixing rhizobium symbioses

van Velzen, R., Holmer, R., Bu, F., Rutten, L. J. J., van Zeijl, A. L., Liu, W., Santuari, L., Cao, Q., Sharma, T., Shen, D., Purwana Roswanjaya, Y., Wardhani, T., Seifi Kalhor, M., Jansen, J., van den Hoogen, D. J., Güngör, B., Hartog, M. V., Hontelez, J., Verver, J., Yang, W-C. & 11 others, Schijlen, E. G. W. M., Repin, R., Schilthuizen, M., Schranz, M. E., Heidstra, R., Miyata, K., Fedorova, E., Kohlen, W., Bisseling, A. H. J., Smit, S. & Geurts, R., 15 May 2018, In : Proceedings of the National Academy of Sciences of the United States of America. 115, 20, p. E4700-E4709

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Parasponia
Rhizobium
symbiosis
nodulation
genomics
12 Citations (Scopus)

Diacylglycerol acyltransferase 1 contributes to freezing tolerance

Arisz, S. A., Heo, J-Y., Koevoets, I. T., Zhao, T., van Egmond, P., Meyer, J., Zeng, W., Niu, X., Wang, B., Mitchell-Olds, T., Schranz, M. E. & Testerink, C., Aug 2018, In : Plant Physiology. 177, 4, p. 1410-1424

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Diacylglycerol O-Acyltransferase
diacylglycerol acyltransferase
cold tolerance
Freezing
freezing
2 Citations (Scopus)

Drivers of Management of Spider Plant (Gynandropsis gynandra) Across Different Socio-linguistic Groups in Benin and Togo

Sogbohossou, E. O. D., Achigan Dako, E., van Andel, T. & Schranz, M. E., Dec 2018, In : Economic Botany. 72, 4, p. 411-435 25 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Gynandropsis gynandra
Benin
Araneae
green leafy vegetables
land tenure

Efficient inference of homologs in large eukaryotic pan-proteomes

Sheikhizadeh Anari, S., de Ridder, D., Schranz, M. E. & Smit, S., 26 Sep 2018, In : BMC Bioinformatics. 19, 1, 11 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Proteome
Genomics
Homology
Proteins
Fungi
5 Citations (Scopus)

Genome-wide nucleotide diversity and associations with geography, ploidy level and glucosinolate profiles in Aethionema arabicum (Brassicaceae)

Mohammadin, S., Wang, W., Liu, T., Moazzeni, H., Ertugrul, K., Uysal, T., Christodoulou, C. S., Edger, P. P., Pires, J. C., Wrigth, S. I. & Schranz, M. E., May 2018, In : Plant Systematics and Evolution. 304, 5, p. 619-630

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
ploidy
glucosinolates
geography
Brassicaceae
genome

Lessons from Cleomaceae, the Sister fo Crucifers

Bayat, S., Schranz, M. E., Roalson, E. H. & Hall, J. C., Sep 2018, In : Trends in Plant Science. 23, 9, p. 808-821

Research output: Contribution to journalArticleAcademicpeer-review

Cleomaceae
Brassicaceae
C4 photosynthesis
physiology
Arabidopsis thaliana
7 Citations (Scopus)

Natural variation within a species for traits underpinning C4 photosynthesis

Reeves, G., Singh, P., Rossberg, T. A., Sogbohossou, E. O. D., Schranz, M. E. & Hibberd, J. M., 1 Jun 2018, In : Plant Physiology. 177, 2, p. 504-512

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
C4 photosynthesis
Photosynthesis
Gynandropsis gynandra
C4 plants
Water
2 Citations (Scopus)

New insights into the phylogeny of the TMBIM superfamily across the three of life: Comparative genomics and synteny networks reveal independent evolution of the BI and LFG families in plants

Gamboa-Tuz, S. D., Pereira-Santana, A., Zhao, T., Schranz, M. E., Castano, E. & Rodriguez-Zapata, L. C., Sep 2018, In : Molecular Phylogenetics and Evolution. 126, p. 266-278

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Synteny
Phylogeny
Genomics
inhibitor
genomics

PISTILLATA paralogs in Tarenaya hassleriana have diverged in interaction specificity

de Bruijn, S., Zhao, T., Muiño, J. M., Schranz, E. M., Angenent, G. C. & Kaufmann, K., 22 Dec 2018, In : BMC Plant Biology. 18, 1, 368.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Brassicaceae
Cleomaceae
transposition (genetics)
Angiospermae
amino acid sequences
1 Citation (Scopus)

The functional change and deletion of FLC homologs contribute to the evolution of rapid flowering in Boechera stricta

Lee, C-R., Hsieh, J-W., Schranz, M. E. & Mitchell-Olds, T., 31 Jul 2018, In : Frontiers in Plant Science. 9, 1078.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Boechera stricta
flowering
gene duplication
genes
phenotype
2017
12 Citations (Scopus)

Anatolian origins and diversification of Aethionema, the sister lineage of the core Brassiceae

Mohammadin, S., Peterse, K., van de Kerke, S. J., Chatrou, L. W., Dönmez, A. A., Mummenhoff, K., Pires, J. C., Edger, P. P., Al-Shehbaz, I. A. & Schranz, M. E., 2017, In : American Journal of Botany. 104, 7, p. 1042-1054

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Brassicaceae
Pliocene
Biodiversity
phylogeny
herbarium
4 Citations (Scopus)

Comparative transcriptomics reveal developmental turning points during embryogenesis of a hemimentabolous insect, the damselfly Ischnura elegans

Simon, S., Sagasser, S., Saccenti, E., Brugler, M. R., Schranz, M. E., Hadrys, H., Amato, G. & DeSalle, R., 19 Oct 2017, In : Scientific Reports. 7, 1, 14 p., 13547.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Ischnura
Zygoptera
transcriptomics
insect development
embryogenesis
9 Citations (Scopus)

Flowering locus C (FLC) is a potential major regulator of glucosinolate content across developmental stages of Aethionema arabicum (brassicaceae)

Mohammadin, S., Nguyen, P., van Weij, M. S., Reichelt, M. & Schranz, E., 2017, In : Frontiers in Plant Science. 8, 876.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
glucosinolates
Brassicaceae
developmental stages
flowering
loci
4 Citations (Scopus)

Identification of the submergence tolerance QTL Come Quick Drowning1 (CGD1) in Arabidopsis thaliana

Akman, M., Kleine, R., van Tienderen, P. H. & Schranz, E. M., 2017, In : Journal of Heredity. 108, 3, p. 308-317

Research output: Contribution to journalArticleAcademicpeer-review

Quantitative Trait Loci
Arabidopsis
Genes
Chromosomes, Human, Pair 5
Inbreeding
8 Citations (Scopus)

Network approaches for plant phylogenomic synteny analysis

Zhao, T. & Schranz, E., 2017, In : Current Opinion in Plant Biology. 36, p. 129-134

Research output: Contribution to journalArticleAcademicpeer-review

genomics
genome
genes
Biological Sciences
history

Parallel loss of symbiosis genes in relatives of nitrogen-fixing non-legume Parasponia

van Velzen, R., Holmer, R., Bu, F., Rutten, L. J. J., van Zeijl, A. L., Liu, W., Santuari, L., Cao, Q., Sharma, T., Shen, D., Purwana Roswanjaya, Y., Wardhani, T., Seifi Kalhor, M., Jansen, J., van den Hoogen, D. J., Gungor, B., Hartog, M. V., Hontelez, J., Verver, J. W. G., Yang, W. C. & 11 others, Schijlen, E. G. W. M., Repin, R., Schilthuizen, M., Schranz, M. E., Heidstra, R., Miyata, K., Fedorova, E., Kohlen, W., Bisseling, A. H. J., Smit, S. & Geurts, R., 28 Jul 2017, BioRxiv, 88 p.

Research output: Working paperAcademic

Parasponia
symbiosis
nodulation
Trema
Rhizobium
11 Citations (Scopus)

Phylogenetic relationships within Lactuca L. (Asteraceae), including African species, based on chloroplast DNA sequence comparisons

Wei, Z., Zhu, S. X., van den Berg, R. G., Bakker, F. T. & Schranz, M. E., 2017, In : Genetic Resources and Crop Evolution. 64, 1, p. 55-71

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Lactuca
Chloroplast DNA
Lettuce
Asteraceae
chloroplast DNA
21 Citations (Scopus)

Phylogenomic Synteny Network Analysis of MADS-Box Transcription Factor Genes Reveals Lineage-Specific Transpositions, Ancient Tandem Duplications, and Deep Positional Conservation

Zhao, T., Holmer, R., de Bruijn, S. A., Angenent, G. C., van den Burg, H. A. & Schranz, M. E., 7 Jul 2017, In : The Plant Cell. 29, 6, p. 1278-1292

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Synteny
transposition (genetics)
Transcription Factors
transcription factors
Genes
1 Citation (Scopus)

Polyploidy in deep and shallow evolutionary times: from ancient cotton, middle aged tobacco to recently formed monkey-flowers

Kovarik, A., Besendorfer, V., Plohl, M. & Schranz, E., 3 Oct 2017, In : Plant Systematics and Evolution. 3 p.

Research output: Contribution to journalShort surveyAcademicpeer-review

Open Access
26 Citations (Scopus)

Young inversion with multiple linked QTLs under selection in a hybrid zone

Lee, C-R., Wange, B., Mojica, J. P., Mandakova, T., Prasad, K. V. S. K., Goicoechea, J. L., Perera, N., Hellsten, U., Hundley, H. N., Johnson, J., Grimwood, J., Barry, K., Fairclough, S., Jenkins, J. W., Yu, Y., Kudrna, D., Zhang, J., Talag, J., Golser, W., Ghattas, K. & 4 others, Schranz, E., Wing, R. A., Lysak, M. A. & Schmutz, J., 2017, In : Nature Ecology & Evolution. 1, 5, 11 p., 0119.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
hybrid zone
quantitative trait loci
chromosome inversions
alleles
Boechera stricta
2016
18 Citations (Scopus)

Comparative paleogenomics of crucifers: Ancestral genomic blocks revisited

Lysak, M. A., Mandáková, T. & Schranz, E., 1 Apr 2016, In : Current Opinion in Plant Biology. 30, p. 108-115

Research output: Contribution to journalArticleAcademicpeer-review

Brassicaceae
genomics
karyotyping
cytogenetics
genome
20 Citations (Scopus)

Developmental control and plasticity of fruit and seed dimorphism in aethionema arabicum

Lenser, T., Graeber, K., Cevik, Ö. S., Mohammadin, S., Nguyen, P., Schranz, M. E. & Scheid, O. M., 2016, In : Plant Physiology. 172, 3, p. 1691-1707

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
dimorphism
Fruit
Seeds
fruits
seeds
15 Citations (Scopus)
Open Access
Cleomaceae
Brassicaceae
Glucosinolates
Bombs
Mustard Plant
13 Citations (Scopus)

Functional network analysis of genes differentially expressed during xylogenesis in soc1ful woody Arabidopsis plants

Davin, N., Edger, P. P., Hefer, C. A., Mizrachi, E., Schuetz, M., Smets, E., Myburg, A. A., Douglas, C. J., Schranz, E. & Lens, F., 2016, In : The Plant Journal. 86, 5, p. 376-390

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Gene Regulatory Networks
Arabidopsis
gene interaction
Transcriptome
Gene Expression
100 Citations (Scopus)

Insight into the evolution of the Solanaceae from the parental genomes of Petunia hybrida

Bombarely, A., Moser, M., Amrad, A., Bao, M., Bapaume, L., Barry, C. S., Bliek, M., Boersma, M. R., Borghi, L., Bruggmann, R., Bucher, M., D'Agostino, N., Davies, K., Druege, U., Dudareva, N., Egea-Cortines, M., Delledonne, M., Fernandez-Pozo, N., Franken, P., Grandont, L. & 37 others, Heslop-Harrison, J. S., Hintzsche, J., Johns, M., Koes, R., Lv, X., Lyons, E., Malla, D., Martinoia, E., Mattson, N. S., Morel, P., Mueller, L. A., Muhlemann, J., Nouri, E., Passeri, V., Pezzotti, M., Qi, Q., Reinhardt, D., Rich, M., Richert-Pöggeler, K. R., Robbins, T. P., Schatz, M. C., Schranz, E., Schuurink, R. C., Schwarzacher, T., Spelt, K., Tang, H., Urbanus, S. L., Vandenbussche, M., Vijverberg, K., Villarino, G. H., Warner, R. M., Weiss, J., Yue, Z., Zethof, J., Quattrocchio, F., Sims, T. L. & Kuhlemeier, C., 2016, In : Nature Plants. 2, 16074.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Petunia hybrida
Solanaceae
genome
Petunia
pollination
26 Citations (Scopus)

Molecular, genetic and evolutionary analysis of a paracentric inversion in Arabidopsis thaliana

Fransz, P., Linc, G., Lee, C. R., Aflitos, S. A., Lasky, J. R., Toomajian, C., Ali, H., Peters, J., van Dam, P., Ji, X., Kuzak, M., Gerats, T., Schubert, I., Schneeberger, K., Colot, V., Martienssen, R., Koornneef, M., Nordborg, M., Juenger, T. E., de Jong, H. & 1 others, Schranz, E., 2016, In : The Plant Journal. 88, 2, p. 159-178

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
paracentric inversion
Arabidopsis
molecular genetics
Haplotypes
Molecular Biology
19 Citations (Scopus)

Natural variation in rosette size under salt stress conditions corresponds to developmental differences between Arabidopsis accessions and allelic variation in the LRR-KISS gene

Julkowska, M. M., Klei, K., Fokkens, L. & Schranz, E., 2016, In : Journal of Experimental Botany. 67, 8, p. 2127-2138

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Arabidopsis
salt stress
Salinity
Salts
stress tolerance
7 Citations (Scopus)

PanTools: representation, storage and exploration of pan-genomic data

Sheikhizadeh Anari, S., Schranz, M. E., Akdel, M., de Ridder, D. & Smit, S., 2016, In : Bioinformatics. 32, 17, p. i487-i493

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Genomics
Genome
Genes
Gene
De Bruijn Graph
9 Citations (Scopus)

Tracing ancestor rice of Suriname Maroons back to its African origin

Van Andel, T. R., Meyer, R. S., Aflitos, S. A., Carney, J. A., Veltman, M. A., Copetti, D., Flowers, J. M., Havinga, R. M., Maat, H., Purugganan, M. D., Wing, R. A. & Schranz, E., 2016, In : Nature Plants. 2, 16149.

Research output: Contribution to journalArticleAcademicpeer-review

Oryza glaberrima
Suriname
ancestry
rice
landraces
29 Citations (Scopus)

Transcriptomes of eight Arabidopsis thaliana accessions reveal core conserved, genotype- and organ-specific responses to flooding stress

van Veen, H., Vashisht, D., Akman, M., Girke, T., Mustroph, A., Reinen, E., Hartman, S., Kooiker, M., van Tienderen, P., Schranz, E., Bailey-Serres, J., Voesenek, L. A. C. J. & Sasidharan, R., 2016, In : Plant Physiology. 172, 2, p. 668-689

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Transcriptome
Arabidopsis
transcriptome
submergence
Arabidopsis thaliana
22 Citations (Scopus)

Whole-genome duplications followed by tandem duplications drive diversification of the protein modifier SUMO in Angiosperms

Hammoudi, V., Vlachakis, G., Schranz, E. & van den Burg, H. A., 2016, In : New Phytologist. 211, 1, p. 172-185

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Angiosperms
modifiers (genes)
ubiquitin
Ubiquitin
Angiospermae