Elio Schijlen

Search results

• Operophtera brumata isolate:WM2013NL Genome sequencing and assembly

  Derks, M. (Creator), Smit, S. (Creator), Salis, L. (Creator), Schijlen, E. (Creator), Bossers, A. (Creator), Mateman, C. (Creator), Pijl, A. S. (Creator), de Ridder, D. (Creator), Groenen, M. A. M. (Creator), Visser, M. E. (Creator) & Megens, H. (Creator), Wageningen University & Research, 11 Aug 2015

  https://www.ncbi.nlm.nih.gov/bioproject/263715

  Dataset

• Operophtera brumata RefSeq Genome

  Derks, M. (Creator), Smit, S. (Creator), Salis, L. (Creator), Schijlen, E. (Creator), Bossers, A. (Creator), Mateman, C. (Creator), Pijl, A. S. (Creator), de Ridder, D. (Creator), Groenen, M. A. M. (Creator), Visser, M. E. (Creator) & Megens, H. (Creator), Wageningen University & Research, 17 Aug 2015

  https://www.ncbi.nlm.nih.gov/bioproject/293072

  Dataset

• RNAseq of Salvia dorisiana plant parts

  Jongedijk, E. (Creator), Müller, S. (Creator), van Dijk, A. (Creator), Schijlen, E. (Creator), Champagne, A. (Creator), Boutry, M. (Creator), Levisson, M. (Creator), van der Krol, S. (Creator), Bouwmeester, H. (Creator) & Beekwilder, J. (Creator), Wageningen University & Research, 23 Mar 2018

  https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE112263

  Dataset

• 84 tomato accessions - Exploring genetic variation in the tomato (Solanum section Lycopersicon) clade by whole-genome sequencing

  Aflitos, S. (Creator), Schijlen, E. (Creator), de Jong, H. (Creator), de Ridder, D. (Creator), Smit, S. (Creator), Finkers, R. (Creator), Bakker, F. (Creator), van de Geest, H. (Creator), te Lintel Hekkert, B. (Creator), van Haarst, J. (Creator), Smits, L. (Creator), Koops, A. (Creator), Sanchez-Perez, M. J. (Creator), van Heusden, S. (Creator), Visser, R. (Creator), Schranz, E. (Creator) & Peters, S. (Creator), Plant Research International, 29 Jan 2014

  https://www.ebi.ac.uk/ena/browser/view/PRJEB5235

  Dataset

• Chasing breeding footprints through structural variations in Cucumis melo and wild relatives

  Demirci, S. (Creator), Fuentes, R. (Creator), van Dooijeweert, W. (Creator), Aflitos, S. A. (Creator), Schijlen, E. (Creator), Hesselink, T. (Creator), de Ridder, D. (Creator), van Dijk, A. (Creator) & Peters, S. (Creator), Wageningen University, 22 Nov 2020

  https://www.ebi.ac.uk/ena/browser/view/PRJEB37978

  Dataset

• Transcription profiling of wild type and DelilaRosea over-expressing tomato fruits

  Schijlen, E. (Creator), Wageningen UR, 3 Oct 2008

  https://www.ebi.ac.uk/arrayexpress/experiments/E-MEXP-1830/

  Dataset

• Data from: Comparative genomics of the nonlegume Parasponia reveals insights into evolution of nitrogen-fixing rhizobium symbioses

  van Velzen, R. (Creator), Holmer, R. (Creator), Bu, F. (Creator), Rutten, L. J. J. (Creator), van Zeijl, A. L. (Creator), Liu, W. (Creator), Santuari, L. (Creator), Cao, Q. (Creator), Sharma, T. (Creator), Shen, D. (Creator), Roswanjaya, Y. (Creator), Wardhani, T. (Creator), Seifi Kalhor, M. (Creator), Jansen, J. (Creator), van den Hoogen, D. J. (Creator), Gungor, B. (Creator), Hartog, M. (Creator), Hontelez, J. (Creator), Verver, J. W. G. (Creator), Yang, W. (Creator), Schijlen, E. (Creator), Repin, R. (Creator), Schilthuizen, M. (Creator), Schranz, E. (Creator), Heidstra, R. (Creator), Miyata, K. (Creator), Fedorova, E. (Creator), Kohlen, W. (Creator), Bisseling, T. (Creator), Smit, S. (Creator) & Geurts, R. (Creator), Wageningen University & Research, 3 May 2018

  DOI: 10.5061/dryad.fq7gv88

  Dataset

• Fusarium poae Genome sequencing and assembly

  Vanheule, A. (Creator), Audenaert, K. (Creator), Warris, S. (Creator), van de Geest, H. C. (Creator), Schijlen, E. (Creator), Höfte, M. (Creator), De Saeger, S. (Creator), Haesaert, G. (Creator), Waalwijk, C. (Creator) & van der Lee, T. (Creator), Wageningen UR, 3 Jun 2016

  http://www.ebi.ac.uk/ena/data/view/PRJNA319914

  Dataset

• Coxiella burnetii strain:3345937 Genome sequencing and assembly

  Kuley, R. (Creator), Smith, H. E. (Creator), Janse, I. (Creator), Harders, F. L. (Creator), Baas, F. (Creator), Schijlen, E. (Creator), Nabuurs-Fransen, M. H. (Creator), Smits, M. A. (Creator), Roest, H. I. J. (Creator) & Bossers, A. (Creator), Wageningen University & Research, 25 Feb 2016

  https://www.ncbi.nlm.nih.gov/bioproject/310186

  Dataset

• Noccaea caerulescens Transcriptome

  Lin, Y. F. (Creator), Severing, E. I. (Creator), te Lintel Hekkert, B. (Creator), Schijlen, E. (Creator) & Aarts, M. (Creator), Wageningen University & Research, 31 Jan 2014

  https://www.ncbi.nlm.nih.gov/bioproject/237055

  Dataset

• Whole-genome amplification (WGA) create specific chimeric fragments, which consist mainly of palindrome sequences. We developed the tool Pacasus to detect and correct these palindromic sequences in long reads, for example from PacBio and Nanopore

  Warris, S. (Creator), Schijlen, E. (Creator), van de Geest, H. C. (Creator), Vegesna, R. (Creator), Hesselink, T. (Creator), te Lintel Hekkert, B. (Creator), Sanchez Perez, G. F. (Creator), Medvedev, P. (Creator), Makova, K. D. (Creator) & de Ridder, D. (Creator), Wageningen UR, 31 Jul 2017

  https://www.ebi.ac.uk/ena/data/view/PRJEB21791

  Dataset

• Xerophyta viscosa Genome sequencing and assembly

  Dias Costa, M. C. (Creator), Silva Artur, M. (Creator), Maia de Oliveira, J. (Creator), Jonkheer, E. (Creator), Derks, M. (Creator), Nijveen, H. (Creator), Williams, B. (Creator), Mundree, S. (Creator), Jiménez-Gómez, J. M. (Creator), Hesselink, T. (Creator), Schijlen, E. (Creator), Ligterink, W. (Creator), Oliver, M. J. (Creator), Farrant, J. M. (Creator) & Hilhorst, H. (Creator), Wageningen University & Research, 31 Mar 2017

  https://www.ncbi.nlm.nih.gov/bioproject/291133

  Dataset

• Parasponia andersonii isolate:WU1-14

  van Velzen, R. (Creator), Holmer, R. (Creator), Bu, F. (Creator), Rutten, L. (Creator), van Zeijl, A. (Creator), Liu, W. (Creator), Santuari, L. (Creator), Cao, Q. (Creator), Sharma, T. (Creator), Shen, D. (Creator), Purwana Roswanjaya, Y. (Creator), Wardhani, T. (Creator), Seifi Kalhor, M. (Creator), Jansen, J. (Creator), van den Hoogen, J. (Creator), Güngör, B. (Creator), Hartog, M. (Creator), Hontelez, J. (Creator), Verver, J. (Creator), Yang, W. (Creator), Schijlen, E. (Creator), Repin, R. (Creator), Schilthuizen, M. (Creator), Schranz, E. (Creator), Heidstra, R. (Creator), Miyata, K. (Creator), Fedorova, E. (Creator), Kohlen, W. (Creator), Bisseling, T. (Creator), Smit, S. (Creator) & Geurts, R. (Creator), Wageningen University, 2 Feb 2018

  https://www.ncbi.nlm.nih.gov/bioproject/PRJNA272473/

  Dataset

• Transgenic plant analysis using NGS

  Schouten, H. (Creator), van de Geest, H. C. (Creator), Papadimitriou, S. (Creator), Bemer, M. (Creator), Schaart, J. (Creator), Smulders, R. (Creator), Sanchez Perez, G. F. (Creator) & Schijlen, E. (Creator), Wageningen UR, 1 Jan 2017

  https://www.ebi.ac.uk/ena/data/view/PRJEB12451

  Dataset

• Coxiella burnetii strain:3262 Genome sequencing

  Kuley, R. (Creator), Smith, H. E. (Creator), Janse, I. (Creator), Harders, F. L. (Creator), Baas, F. (Creator), Schijlen, E. (Creator), Nabuurs-Fransen, M. H. (Creator), Smits, M. A. (Creator), Roest, H. I. J. (Creator) & Bossers, A. (Creator), Wageningen University & Research, 25 Feb 2016

  https://www.ncbi.nlm.nih.gov/bioproject/305987

  Dataset

• Wolbachia endosymbiont of Operophtera brumata strain:Ob_Wba Genome sequencing and assembly

  Derks, M. (Creator), Smit, S. (Creator), Salis, L. (Creator), Schijlen, E. (Creator), Bossers, A. (Creator), Mateman, C. (Creator), Pijl, A. S. (Creator), de Ridder, D. (Creator), Groenen, M. A. M. (Creator), Visser, M. E. (Creator) & Megens, H. (Creator), Wageningen University & Research, 11 Aug 2015

  https://www.ncbi.nlm.nih.gov/bioproject/276497

  Dataset

• Linked-read genome of Bracon brevicornis, a parasitoid wasp, with annotation

  Ferguson, K. (Creator), Pannebakker, B. (Creator), Centurión, A. (Creator), van den Heuvel, J. (Creator), Nieuwenhuis, R. (Creator), Becker, F. (Creator), Schijlen, E. (Creator), Thiel, A. (Creator), Zwaan, B. (Creator) & Verhulst, E. (Creator), Wageningen University, 6 Jan 2020

  https://www.ebi.ac.uk/ena/browser/view/PRJEB35412

  Dataset

• P starvation in tomato

  Wang, Y. (Creator), Suarez Duran, H. (Creator), van Haarst, J. (Creator), Schijlen, E. (Creator), Ruyter-Spira, C. (Creator), Medema, M. (Creator), Dong, L. (Creator) & Bouwmeester, H. J. (Creator), University of Amsterdam, 18 Nov 2020

  https://www.ncbi.nlm.nih.gov/bioproject/PRJNA679261

  Dataset

• Root associated fungal communities from the Wageningen long term biodiversity-productivity experiment

  Mommer, L. (Creator), Cotton, A. (Creator), Raaijmakers, J. M. (Creator), Termorshuizen, A. J. (Creator), van Ruijven, J. (Creator), Hendriks, M. (Creator), van Rijssel, S. (Creator), van de Mortel, J. E. (Creator), van der Paauw, J. W. M. (Creator), Schijlen, E. (Creator), Smit-Tiekstra, A. (Creator), Berendse, F. (Creator), de Kroon, H. (Creator) & Dumbrell, A. J. (Creator), University of Sheffield, 24 Dec 2017

  https://www.ebi.ac.uk/ena/data/view/PRJEB18545

  Dataset

• Trema orientale Genome sequencing and assembly

  van Velzen, R. (Creator), Holmer, R. (Creator), Bu, F. (Creator), Rutten, L. (Creator), van Zeijl, A. (Creator), Liu, W. (Creator), Santuari, L. (Creator), Cao, Q. (Creator), Sharma, T. (Creator), Shen, D. (Creator), Purwana Roswanjaya, Y. (Creator), Wardhani, T. (Creator), Seifi Kalhor, M. (Creator), Jansen, J. (Creator), van den Hoogen, J. (Creator), Güngör, B. (Creator), Hartog, M. (Creator), Hontelez, J. (Creator), Verver, J. (Creator), Yang, W. (Creator), Schijlen, E. (Creator), Repin, R. (Creator), Schilthuizen, M. (Creator), Schranz, E. (Creator), Heidstra, R. (Creator), Miyata, K. (Creator), Fedorova, E. (Creator), Kohlen, W. (Creator), Bisseling, T. (Creator), Smit, S. (Creator) & Geurts, R. (Creator), Wageningen University, 2 Feb 2018

  https://www.ncbi.nlm.nih.gov/bioproject/PRJNA272482/

  Dataset