Research output per year
Research output per year
Fingerprint
Dive into the research topics where Dirk-Jan M. van Workum is active. These topic labels come from the works of this person. Together they form a unique fingerprint.
- 1 Similar Profiles
Collaborations and top research areas from the last five years
Recent external collaboration on country/territory level. Dive into details by clicking on the dots or
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High-Quality Plant Genomes for and through Pangenomics
Papastolopoulou, C., Yang, Z., van Workum, F. J. M., Wijfjes, R. & Smit, S., 2025, Genome Assembly. Humana Press, Vol. 2955. p. 293-316 (Methods in Molecular Biology; vol. 2955).Research output: Chapter in Book/Report/Conference proceeding › Chapter › Academic › peer-review
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Multipla: Multiscale Pangenomic Locus Analysis
van den Brandt, A., Ståhlbom, E., van Workum, F. J. M., van de Wetering, H., Lundström, C., Smit, S. & Vilanova, A., 2025, In: Computer Graphics Forum. 44, 3, 12 p., e70147.Research output: Contribution to journal › Article › Academic › peer-review
Open Access -
Lactuca super-pangenome reduces bias towards reference genes in lettuce research
van Workum, D. J. M., Mehrem, S. L., Snoek, B. L., Alderkamp, M. C., Lapin, D., Mulder, F. F. M., Van den Ackerveken, G., de Ridder, D., Schranz, M. E. & Smit, S., 28 Oct 2024, In: BMC Plant Biology. 24, 12 p., 1019.Research output: Contribution to journal › Article › Academic › peer-review
Open Access5 Citations (Scopus) -
Lactuca super-pangenome reduces bias towards reference genes in lettuce research
van Workum, F. J. M., Mehrem, S. L., Snoek, L. B., Alderkamp, M. C., Lapin, D. N., Mulder, F. F. M., Van Den Ackerveken, G., de Ridder, D., Schranz, M. E. & Smit, S., 22 Jun 2024, BioRxiv.Research output: Working paper › Preprint
Open Access -
Datasets
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Dataset underlying the publication: "MoGAAAP: A modular Snakemake workflow for automated genome assembly and annotation with quality assessment"
van Workum, D.-J. M. (Creator), Dey, K. K. (Creator), Kozik, A. (Creator), Lavelle, D. (Creator), de Ridder, D. (Creator), Schranz, E. (Creator), Michelmore, R. (Creator) & Smit, S. (Creator), Wageningen University & Research, 17 Feb 2025
DOI: 10.4121/4b39da65-2eef-4e05-8583-25f8850cf932
Dataset
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Data underlying the publication "The Lettuce Expression Browser: from lab to LEB"
van Workum, D.-J. M. (Creator), van den Bergh, E. S. (Creator), Shetty, S. (Creator), van Lieshout, J. (Creator), Feng, T. (Creator), Alderkamp, M. C. (Creator), Flores Andaluz, G. (Creator), Pauls, A. (Creator), Mulder, F. F. M. (Creator), Lapin, D. (Creator), Aarts, M. (Creator), Van Den Ackerveken, G. (Creator), Offringa, R. (Creator), Pierik, R. (Creator), Proveniers, M. C. G. (Creator), Schranz, E. (Creator), Smit, S. (Creator), Heidstra, R. (Creator) & Horstman, A. (Creator), Wageningen University & Research, 23 Oct 2025
DOI: 10.4121/8a593c82-89d4-41ee-8747-4bc7fb07d844
Dataset
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Data underlying the publication: Lactuca super-pangenome reduces bias towards reference genes in lettuce research
van Workum, D.-J. M. (Creator), Mehrem, S. L. (Creator), Snoek, B. (Creator), Alderkamp, M. (Creator), Lapin, D. (Creator), Mulder, F. F. M. (Creator), van den Ackerveken, G. (Creator), de Ridder, D. (Creator), Schranz, E. (Creator) & Smit, S. (Creator), Wageningen University & Research, 6 Jun 2024
DOI: 10.4121/c7935d6a-d6ae-42e7-af7e-0ae8cddf70d7
Dataset
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Picochlorum sp. BPE23 genome assembly
Barten, R. J. P. (Creator), van Workum, F. J. M. (Creator), de Bakker, E. (Creator), Risse, J. E. (Creator), Kleisman, M. (Creator), Correia Navalho, S. A. (Creator), Smit, S. (Creator), Wijffels, R. H. (Creator), Nijveen, H. (Creator) & Barbosa, M. J. (Creator), Wageningen University & Research, 23 Aug 2022
https://www.ncbi.nlm.nih.gov/bioproject/872549
Dataset
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This study contains the re-sequencing data of 100 Lactuca accessions derived from the CGN (Centre for Genetic Resources, the Netherlands) collection.
Xiong, W. (Creator), Berke, L. (Creator), Michelmore, R. (Creator), van Workum, D. (Creator), Becker, F. F. M. (Creator), Schijlen, E. (Creator), Bakker, L. V. (Creator), Peters, S. (Creator), van Treuren, R. (Creator), Jeuken, M. (Creator), Bouwmeester, K. (Creator) & Schranz, E. (Creator), Wageningen University & Research, 29 Jun 2020
https://www.ebi.ac.uk/ena/browser/view/PRJEB36060
Dataset
Projects
- 1 Active
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An integrative analysis of variation in Lactuca.
van Workum, D.-J. M. (PhD candidate), de Ridder, D. (Promotor), Schranz, E. (Co-promotor) & Smit, S. (Co-promotor)
1/11/20 → …
Project: PhD