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Research Output 1978 2019

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2019
1 Citation (Scopus)

Phytochrome a protects tomato plants from injuries induced by continuous light

Velez-Ramirez, A. I., Vreugdenhil, D., Millenaar, F. F. & van Ieperen, W., 30 Jan 2019, In : Frontiers in Plant Science. 10, 19.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
phytochrome
tomatoes
photoreceptors
far-red light
growth and development

Quantitative trait loci analysis of hormone levels in Arabidopsis roots

Lee, S., Sergeeva, L. I. & Vreugdenhil, D., 28 Jun 2019, In : PLoS ONE. 14, 6, e0219008.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Cytokinins
Quantitative Trait Loci
Arabidopsis
quantitative trait loci
hormones
2018
5 Citations (Scopus)

Natural variation of hormone levels in Arabidopsis roots and correlations with complex root architecture

Lee, S., Sergeeva, L. I. & Vreugdenhil, D., Apr 2018, In : Journal of Integrative Plant Biology. 60, 4, p. 292-309

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Plant Growth Regulators
Arabidopsis
hormones
Hormones
plant hormones
2017
49 Citations (Scopus)

Genetic architecture of plant stress resistance: multi-trait genome-wide association mapping

Thoen, H. P. M., Davila Olivas, N. H., Kloth, K. J., Coolen, S., Huang, P., Aarts, M. G. M., Molenaar, J. A., Bakker, J., Bouwmeester, H. J., Broekgaarden, C., Bucher, J., Busscher-Lange, J., Cheng, X., van Dijk-Fradin, E. F., Jongsma, M. A., Julkowska, M. M., Keurentjes, J. J. B., Ligterink, W., Pieterse, C. M. J., Ruyter-Spira, C. P. & 13 others, Smant, G., van Schaik, C. C., van Wees, S. C. M., Visser, R. G. F., Voorrips, R. E., Vosman, B., Vreugdenhil, D., Warmerdam, S., Wiegers, G. L., van Heerwaarden, J., Kruijer, W. T., van Eeuwijk, F. A. & Dicke, M., 2017, In : New Phytologist. 213, 3, p. 1346-1362

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
plant stress
stress tolerance
chromosome mapping
Genome
single nucleotide polymorphism

Moderate salinity improves stomatal functioning in rose plants grown at high relative air humidity

Carvalho, D. R. A., Vasconcelos, M. W., Lee, S., Vreugdenhil, D., Heuvelink, E. & Pinto de Carvalho, S., 2017, In : Environmental and Experimental Botany. 143, p. 1-9

Research output: Contribution to journalArticleAcademicpeer-review

humidity
Rosa
abscisic acid
salinity
air
7 Citations (Scopus)

On the induction of injury in tomato under continuous light: Circadian asynchrony as the main triggering factor

Velez-Ramirez, A. I., Dünner-Planella, G., Vreugdenhil, D., Millenaar, F. F. & Van Ieperen, W., 2017, In : Functional Plant Biology. 44, 6, p. 597-611

Research output: Contribution to journalArticleAcademicpeer-review

tomatoes
circadian rhythm
photoinhibition
photoperiod
Solanum lycopersicum
5 Citations (Scopus)

Sucrose and Starch Content Negatively Correlates with PSII Maximum Quantum Efficiency in Tomato (Solanum lycopersicum) Exposed to Abnormal Light/Dark Cycles and Continuous Light"

Velez Ramirez, A. I., Carreno Quintero, N., Vreugdenhil, D., Millenaar, F. F. & van Ieperen, W., 1 Aug 2017, In : Plant and Cell Physiology. 58, 8, p. 1339-1349

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Photoperiod
Solanum lycopersicum
Lycopersicon esculentum
Starch
Sucrose
2016
4 Citations (Scopus)

Gene expression and physiological responses associated to stomatal functioning in Rosa × hybrida grown at high relative air humidity

Alves Carvalho, D., Vasconcelos, M. W., Lee, S., Koning-Boucoiran, C. F. S., Vreugdenhil, D., Krens, F. A., Heuvelink, E. & Pinto de Carvalho, S., 2016, In : Plant Science. 253, p. 154-163

Research output: Contribution to journalArticleAcademicpeer-review

Humidity
Abscisic Acid
plant response
humidity
Rosa
29 Citations (Scopus)

Genome-wide association mapping and genomic prediction elucidate the genetic architecture of morphological traits in arabidopsis

Kooke, R., Kruijer, W., Bours, R., Becker, F., Kuhn, A., van de Geest, H., Buntjer, J., Doeswijk, T., Guerra, J., Bouwmeester, H., Vreugdenhil, D. & Keurentjes, J. J. B., 2016, In : Plant Physiology. 170, 4, p. 2187-2203

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Arabidopsis
chromosome mapping
Genome
genomics
genome
23 Citations (Scopus)

Genome wide association mapping of time-dependent growth responses to moderate drought stress in Arabidopsis

Bac-Molenaar, J. A., Granier, C., Keurentjes, J. J. B. & Vreugdenhil, D., 2016, In : Plant, Cell & Environment. 39, 1, p. 88-102

Research output: Contribution to journalArticleAcademicpeer-review

Droughts
Arabidopsis
chromosome mapping
water stress
drought
2015
4 Citations (Scopus)

Continuous-light tolerance in tomato is graft-transferable

Vélez Ramírez, A. I., van Ieperen, W., Vreugdenhil, D. & Millenaar, F. F., 2015, In : Planta. 241, 1, p. 285-290

Research output: Contribution to journalArticleAcademicpeer-review

Lycopersicon esculentum
tomatoes
Transplants
Light
shoots
73 Citations (Scopus)

Epigenetic Basis of Morphological Variation and Phenotypic Plasticity in Arabidopsis thaliana

Kooke, R., Johannes, F., Wardenaar, R., Becker, F. F. M., Etcheverry, M., Colot, V., Vreugdenhil, D. & Keurentjes, J. J. B., 2015, In : The Plant Cell. 27, 2, p. 337-348

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
phenotypic plasticity
Arabidopsis
Epigenomics
epigenetics
Arabidopsis thaliana
18 Citations (Scopus)

Expression of auxin synthesis gene tms1 under control of tuber-specific promoter enhances potato tuberization in vitro

Kolachevskaya, O. O., Alekseeva, V., Sergeeva, L. & Vreugdenhil, D., 2015, In : Journal of Integrative Plant Biology. 57, 9, p. 734-744

Research output: Contribution to journalArticleAcademicpeer-review

Indoleacetic Acids
Solanum tuberosum
auxins
tubers
Genes
34 Citations (Scopus)
Quantitative Trait Loci
Arabidopsis
chromosome mapping
Fertility
heat stress
29 Citations (Scopus)

Genome-wide association mapping of growth dynamics detects time-specific and general quantitative trait loci

Bac-Molenaar, J. A., Vreugdenhil, D., Granier, C. & Keurentjes, J. J. B., 2015, In : Journal of Experimental Botany. 66, 18, p. 5567-5580

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Quantitative Trait Loci
chromosome mapping
quantitative trait loci
Genome
genome
5 Citations (Scopus)
Open Access
Anthocyanins
Arabidopsis
chromosome mapping
anthocyanins
Arabidopsis thaliana
2014
35 Citations (Scopus)

A single locus confers tolerance to continuous light and allows substantial yield increase in tomato

Vélez Ramírez, A. I., van Ieperen, W., Vreugdenhil, D., van Poppel, P. M. J. A., Heuvelink, E. & Millenaar, F. F., 2014, In : Nature Communications. 5, 4549.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
tomatoes
Lycopersicon esculentum
loci
Light
photoperiod
26 Citations (Scopus)

Group VII Ethylene Response Factor diversification and regulation in four species from flood-prone environments.

van Veen, H., Akman, M., Jamar, D. C. L., Vreugdenhil, D., Kooiker, M., van Tienderen, P. H., Voesenek, L. A. C. J., Schranz, M. E. & Sasidharan, R., 2014, In : Plant, Cell & Environment. 37, 10, p. 2421-2432

Research output: Contribution to journalArticleAcademicpeer-review

Rorippa
Rumex
ethylene
flooding tolerance
Synteny
2012
9 Citations (Scopus)

Starch-related Enzymes during Potato Tuber Dormancy and Sprouting

Sergeeva, L. I., Claassens, M. M. J., Jamar, D. C. L., van der Plas, L. H. W. & Vreugdenhil, D., 2012, In : Russian Journal of Plant Physiology. 59, 4, p. 556-564

Research output: Contribution to journalArticleAcademicpeer-review

sprouting
dormancy
tubers
potatoes
starch
2011
64 Citations (Scopus)

Natural variation of submergence tolerance among Arabidopsis thaliana accessions

Vashisht, D., Hesselink, A., Pierik, R., Ammerlaan, J. M. H., Bailet-Serres, J., Visser, E. J. W., Perdersen, O., van Zanten, M., Vreugdenhil, D., Jamar, D. C. L., Voesenek, L. A. C. J. & Sasidharan, R., 2011, In : New Phytologist. 190, 2, p. 299-310

Research output: Contribution to journalArticleAcademicpeer-review

submergence
Arabidopsis
Arabidopsis thaliana
flooding tolerance
shoots
2010
22 Citations (Scopus)

Relation among plant growth, carbohydrates and flowering time in the Landsberg erecta x Kondara recombinant inbred line population

El-Lithy, M. E., Reymond, M., Stich, B., Koornneef, M. & Vreugdenhil, D., 2010, In : Plant, Cell & Environment. 33, p. 1369-1382

Research output: Contribution to journalArticleAcademicpeer-review

inbred lines
quantitative trait loci
Carbohydrates
plant growth
carbohydrates
2009
56 Citations (Scopus)

A strong effect of growth medium and organ type on the identification of QTLs for phytate and mineral concentrations in three Arabidopsis thaliana RIL populations

Ghandilyan, A., Ilk, N., Hanhart, C. J., Mbengue, M., Barboza, L., Schat, H., Koornneef, M., El-Lithy, M. E. M., Vreugdenhil, D., Reymond, M. & Aarts, M. G. M., 2009, In : Journal of Experimental Botany. 60, 5, p. 1409-1425

Research output: Contribution to journalArticleAcademicpeer-review

Phytic Acid
Quantitative Trait Loci
phytic acid
Arabidopsis
mineral content
166 Citations (Scopus)

System-wide molecular evidence for phenotypic buffering in Arabidopsis

Fu, J., Keurentjes, J. J. B., Bouwmeester, H. J., America, T., Verstappen, F., Ward, J. L., Beale, M. H., de Vos, C. H., Dijkstra, M., Scheltema, R. A., Johannes, F., Koornneef, M., Vreugdenhil, D., Breitling, R. & Jansen, R. C., 2009, In : Nature Genetics. 41, 2, p. 166-167

Research output: Contribution to journalArticleAcademicpeer-review

Quantitative Trait Loci
Arabidopsis
Mass Spectrometry
Electrophoresis, Gel, Two-Dimensional
Liquid Chromatography
291 Citations (Scopus)

What has natural variation taught us about plant development, physiology, and adaptation?

Alonso-Blanco, C., Aarts, M. G. M., Bentsink, L., Keurentjes, J. J. B., Reymond, M., Vreugdenhil, D. & Koornneef, M., 2009, In : The Plant Cell. 21, 7, p. 1877-1896

Research output: Contribution to journalArticleAcademicpeer-review

Plant Physiological Phenomena
Plant Development
plant development
physiology
plant physiology
2008
77 Citations (Scopus)

Integrative analyses of genetic variation in enzyme activities of primary carbohydrate metabolism reveal distinct modes of regulation in Arabidopsis thaliana

Keurentjes, J. J. B., Sulpice, R., Gibon, Y., Steinhauser, M. C., Fu, J., Koornneef, M., Stitt, M. & Vreugdenhil, D., 2008, In : Genome Biology. 9, 8, R129.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Carbohydrate Metabolism
carbohydrate metabolism
Arabidopsis
enzyme activity
genetic variation
2 Citations (Scopus)

Mapping loci for chlorosis associated with chlorophyII b deficiency in potato

Simko, I., Berg, J. H., Vreugdenhil, D. & Ewing, E. E., 2008, In : Euphytica. 162, 1, p. 99-107

Research output: Contribution to journalArticleAcademicpeer-review

Hypochromic Anemia
chlorosis
Solanum tuberosum
potatoes
loci
56 Citations (Scopus)

Quantitative genetics in the age of omics

Keurentjes, J. J. B., Koornneef, M. & Vreugdenhil, D., 2008, In : Current Opinion in Plant Biology. 11, p. 123-128

Research output: Contribution to journalArticleAcademicpeer-review

quantitative genetics
geneticists
quantitative traits
genetic variation
genes
33 Citations (Scopus)

Quantitative trait loci analysis of phytate and phosphate concentrations in seeds and leaves of Brassica rapa

Jianjun Zhao, J., Jamar, D. C. L., Lou, P., Wang, Y., Wu, J., Wang, X., Bonnema, A. B., Koornneef, M. & Vreugdenhil, D., 2008, In : Plant, Cell & Environment. 31, 7, p. 887-900

Research output: Contribution to journalArticleAcademicpeer-review

Brassica rapa
Phytic Acid
Cotyledon
Quantitative Trait Loci
phytic acid
2007
59 Citations (Scopus)

Association mapping of leaf traits, flowering time, and phytate content in Brassica rapa

Jianjun Zhao, J., Paulo, M. J., Jamar, D. C. L., Lou, P., van Eeuwijk, F. A., Bonnema, A. B., Vreugdenhil, D. & Koornneef, M., 2007, In : Genome. 50, 10, p. 963-973

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Brassica rapa
Phytic Acid
Population
Phosphates
Plant Oils
150 Citations (Scopus)

Development of a near-isogenic line population of Arabidopsis thaliana and comparison of mapping power with a recombinant inbred line population

Keurentjes, J. J. B., Bentsink, L., Alonso-Blanco, C., Blankestijn-de Vries, M. H. C., Effgen, S., Vreugdenhil, D. & Koornneef, M., 2007, In : Genetics. 175, p. 891-905

Research output: Contribution to journalArticleAcademicpeer-review

Quantitative Trait Loci
Arabidopsis
Population
Population Density
Cape Verde
93 Citations (Scopus)

Quantitative trait loci for flowering time and morphological traits in multiple populations of Brassica rapa

Lou, P., Jianjun Zhao, J., Kim, J. S., Shen, S., Pino del Carpio, D., Song, X., Jin, M., Vreugdenhil, D., Wang, X., Koornneef, M. & Bonnema, A. B., 2007, In : Journal of Experimental Botany. 58, 14, p. 4005-4016

Research output: Contribution to journalArticleAcademicpeer-review

Brassica napus
Brassica rapa
Quantitative Trait Loci
quantitative trait loci
turnips
231 Citations (Scopus)

Regulatory network construction in Arabidopsis by using genome-wide gene expression quantitative trait loci

Keurentjes, J. J. B., Fu, J., Terpstra, I. R., Garcia, J. M., van den Ackerveken, G., Snoek, L. B., Peeters, A. J., Vreugdenhil, D., Koornneef, M. & Jansen, R. C., 2007, In : Proceedings of the National Academy of Sciences of the United States of America. 104, 5, p. 1708-1713

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
quantitative trait loci
Arabidopsis
gene expression
genome
inbred lines
7 Citations (Scopus)

Use of QTL analysis in physiological research

Vreugdenhil, D., Koornneef, M. & Sergeeva, L. I., 2007, In : Russian Journal of Plant Physiology. 54, 1, p. 10-15

Research output: Contribution to journalArticleAcademicpeer-review

genetic resources
quantitative trait loci
Arabidopsis
crops
genes
2006
71 Citations (Scopus)

New Arabidopsis recombinant inbred line populations genotyped using SNPWave and their use for mapping flowering-time quantitative trait loci.

El-Lithy, M. E. M., Bentsink, L., Hanhart, C. J., Ruys, G. J., Rovito, D., Broekhof, J. L. M., van der Poel, H. J., Eijk, M. J., Vreugdenhil, D. & Koornneef, M., 2006, In : Genetics. 172, 3, p. 1867-1876

Research output: Contribution to journalArticleAcademicpeer-review

Quantitative Trait Loci
Arabidopsis
Population
Colombia
Single Nucleotide Polymorphism
94 Citations (Scopus)

Progress in the genetic understanding of plant iron and zinc nutrition

Ghandilyan, A., Vreugdenhil, D. & Aarts, M. G. M., 2006, In : Physiologia Plantarum. 126, 3, p. 407-417

Research output: Contribution to journalArticleAcademicpeer-review

plant genetics
Zinc
Iron
Quantitative Trait Loci
zinc
350 Citations (Scopus)

The genetics of plant metabolism

Keurentjes, J. J. B., Fu, J., de Vos, C. H., Lommen, A., Hall, R. D., Bino, R. J., van der Plas, L. H. W., Jansen, R. C., Vreugdenhil, D. & Koornneef, M., 2006, In : Nature Genetics. 38, 7, p. 842-849

Research output: Contribution to journalArticleAcademicpeer-review

Arabidopsis
Metabolomics
Quantitative Trait Loci
Liquid Chromatography
Breeding
123 Citations (Scopus)

Vacuolar invertase regulates elongation of Arabidopsis thaliana roots as revealed by QTL and mutant analysis.

Sergeeva, L. I., Keurentjes, J. J. B., Bentsink, L., Vonk, J., van der Plas, L. H. W., Koornneef, M. & Vreugdenhil, D., 2006, In : Proceedings of the National Academy of Sciences of the United States of America. 103, 8, p. 2994-2999

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
beta-fructofuranosidase
quantitative trait loci
Arabidopsis thaliana
hypocotyls
mutants
2005
27 Citations (Scopus)

Altered photosynthetic performance of a natural Arabidopsis accession is associated with atrazine resistance

El-Lithy, M. E. M., Rodrigues, G. C., van Rensen, J. J. S., Snel, J. F. H., Dassen, J. H. A., Koornneef, M., Jansen, M. A. K., Aarts, M. G. M. & Vreugdenhil, D., 2005, In : Journal of Experimental Botany. 56, 416, p. 1625-1634

Research output: Contribution to journalArticleAcademicpeer-review

Atrazine
atrazine
Arabidopsis
Photosystem II Protein Complex
Chlorophyll
17 Citations (Scopus)

Ethanol breaks dormancy of the potato tuber apical bud

Claassens, M. M. J., Verhees, J. A., van der Plas, L. H. W., van der Krol, A. R. & Vreugdenhil, D., 2005, In : Journal of Experimental Botany. 56, 419, p. 2515-2525

Research output: Contribution to journalArticleAcademicpeer-review

Solanum tuberosum
dormancy
tubers
Ethanol
buds
2004
155 Citations (Scopus)

Analysis of natural allelic variation of Arabidopsis seed germination and seed longevity traits between the accessions Landberg erecta and Shakdara, using a new recombinant inbred line population

Clerkx, E. J. M., El-Lithy, M. E. M., Vierling, E., Ruijs, G. J., de Vries, M. H. C., Groot, S. P. C., Vreugdenhil, D. & Koornneef, M., 2004, In : Plant Physiology. 135, 1, p. 432-443

Research output: Contribution to journalArticleAcademicpeer-review

Germination
Arabidopsis
inbred lines
quantitative trait loci
Seeds
19 Citations (Scopus)

Comparing potato tuberization and sprouting: opposite phenomena

Vreugdenhil, D., 2004, In : American Journal of Potato Research. 81, 4, p. 275-280

Research output: Contribution to journalArticleAcademicpeer-review

tuber sprouting
sprouting
tubers
potatoes
hormonal regulation
21 Citations (Scopus)

Histochemical analysis reveals organ-specifics Quantitative Trait Loci for enzyme activities in Arabidopsis

Sergeeva, L. I., Vonk, J., Keurentjes, J. J. B., van der Plas, L. H. W., Koornneef, M. & Vreugdenhil, D., 2004, In : Plant Physiology. 134, 1, p. 237-245

Research output: Contribution to journalArticleAcademicpeer-review

Phosphoglucomutase
Quantitative Trait Loci
phosphoglucomutase
Arabidopsis
quantitative trait loci
483 Citations (Scopus)

Naturally occurring genetic variation in Arabidopsis thaliana

Koornneef, M., Alonso-Blanco, C. & Vreugdenhil, D., 2004, In : Annual Review of Plant Biology. 55, p. 141-172

Research output: Contribution to journalArticleAcademicpeer-review

Arabidopsis
Arabidopsis thaliana
genetic variation
Quantitative Trait Loci
quantitative trait loci
124 Citations (Scopus)

Natural variation and QTL analysis for cation mineral content in seeds of Arabidopsis thaliana

Vreugdenhil, D., Aarts, M. G. M., Koornneef, M., Nelissen, H. & Ernst, W. H. O., 2004, In : Plant, Cell & Environment. 27, 7, p. 828-839

Research output: Contribution to journalArticleAcademicpeer-review

Arabidopsis
mineral content
Minerals
Cations
quantitative trait loci
97 Citations (Scopus)

Quantitative trait local analysis of growth-related traits in a new Arabidopsis recombinant inbred population

El-Lithy, M. E. M., Clerkx, E. J. M., Ruijs, G. J., Koornneef, M. & Vreugdenhil, D., 2004, In : Plant Physiology. 135, 1, p. 444-458

Research output: Contribution to journalArticleAcademicpeer-review

quantitative traits
Arabidopsis
Weights and Measures
Growth
Population
2003
10 Citations (Scopus)

Evidence of medium-chain-length polyhydroxyoctanoate accumulation in transgenic potato lines expressing the Pseudomonas oleovorans Pha-C1 polymerase in the cytoplasm

Romano, A., Vreugdenhil, D., Jamar, D. C. L., van der Plas, L. H. W., de Roo, G., Witholt, B., Eggink, G. & Mooibroek, A., 2003, In : Biochemical Engineering Journal. 16, p. 135-143

Research output: Contribution to journalArticleAcademicpeer-review

Pseudomonas oleovorans
Solanum tuberosum
Chain length
Suspensions
Cytoplasm
109 Citations (Scopus)

The genetics of phytate and phosphate accumulation in seeds and leaves of Arabidopsis thaliana, using natural variation

Bentsink, L., Yuan, K., Koornneef, M. & Vreugdenhil, D., 2003, In : Theoretical and Applied Genetics. 106, 7, p. 1234-1243

Research output: Contribution to journalArticleAcademicpeer-review

Phytic Acid
Cotyledon
phytic acid
Arabidopsis
Arabidopsis thaliana
2002
17 Citations (Scopus)

Characterization of gene expression during potato tuber development in individuals and populations using the luciferase reporter system

Verhees, J., van der Krol, A. R., Vreugdenhil, D. & van der Plas, L. H. W., 2002, In : Plant Molecular Biology. 50, p. 653-665

Research output: Contribution to journalArticleAcademicpeer-review

personal development
luciferase
Solanum tuberosum
Luciferases
tubers
21 Citations (Scopus)

In situ analysis of enzymes involved in sucrose to hexose-phosphate conversion during stolon-to-tuber transition of potato

Appeldoorn, N. J. G., Sergeeva, L., Vreugdenhil, D., van der Plas, L. H. W. & Visser, R. G. F., 2002, In : Physiologia Plantarum. 115, p. 303-310

Research output: Contribution to journalArticleAcademicpeer-review

fructokinase
Hexoses
sucrose synthase
hexoses
beta-fructofuranosidase
54 Citations (Scopus)

In situ staining of activities of enzymes involved in carbohydrate metabolism in plant tissues

Sergeeva, L. I. & Vreugdenhil, D., 2002, In : Journal of Experimental Botany. 53, p. 361-370

Research output: Contribution to journalArticleAcademicpeer-review